Sardina pilchardus (sardine): 134088614
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Entry
134088614 CDS
T10667
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134088614 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134088614 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134088614 (vps36)
Membrane trafficking [BR:
spil04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
134088614 (vps36)
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134088614 (vps36)
Exosomal proteins of colorectal cancer cells
134088614 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
BBL5
MA3
TssO
Motif
Other DBs
NCBI-GeneID:
134088614
NCBI-ProteinID:
XP_062398647
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All DBs
Position
8:complement(9801091..9802687)
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AA seq
382 aa
AA seq
DB search
MDRFTWSNGLLEINETLVIQQRGIRLYDGDDKAKMDVGIVLLTTHRLIWRDQKNHECCIS
IPLSQVIFFEEQAAGIGKSAKIVVHLHPNPANKEPGPYQHSKFSYIKLSFKEHGQIEFYR
RLTEEMIQKRWENTPASEPMPTATGSKTGRTRAVGIVGIERKLEEKRKETDKSISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttttacgtggtctaacgggttattggaaataaatgaaacgttggtgattcag
caaagaggtatcagactgtatgatggagatgataaggctaaaatggacgtgggaatagtc
ttgctaactacccatcggctgatatggagggatcagaagaatcatgagtgttgcatttcc
atacctctctctcaggttatatttttcgaagaacaagccgctggcattggaaagagtgca
aagatagttgttcacttacacccaaaccctgcaaacaaggagccgggtccataccagcac
agcaagttttcctacatcaagttgtccttcaaggaacatgggcagattgagttctaccgg
agactgacagaggagatgatacaaaagagatgggagaacacaccagcctctgaacccatg
cctacagcaacaggatctaagacaggaagaacccgtgcagttggaatagtaggcattgag
agaaagttggaggagaaacgcaaagagacagacaagagcatatcggaggcatttgaggac
ctcagtaagctcatggtgaaagccaaagagatggtggaactgtcaagatccatcgccaac
aaaatcaaagacaagcaaggggacatcacagaagatgaaaccatccgtttcaagtcatac
ttgctcagcatgggcatagccaatcctgtaaccagagagacccatggttcagggacacat
tatcatatgcaactggcgaaacagctgggtgacatgctgcaggcccctctggaagagcgt
ggcggtatgatggctctgacagaggtctactgcctggtgaacagggccagagggatggag
cttctgtctcccgaggacttggtgaacgcctgtaagatgtttgagtctctgaaactgcct
ttgaggctgcgggtctttgacagcggcgtcatggtggtccagcttcaatcccatagcgaa
gaggagatgatcgcctcagctctggataatgtgtctgacaagggttccctgaccgctgaa
gagtttgccaaacttttagggctgtcggtgcttctatctaaggagagactactgttggct
gaaaaaatgggacatttgtgccgggatgactcggtagagggattgcgattttatccaaat
ttattttaa
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