Sardina pilchardus (sardine): 134088708
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Entry
134088708 CDS
T10667
Symbol
notch1b
Name
(RefSeq) neurogenic locus notch homolog protein 1b isoform X1
KO
K02599
Notch 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134088708 (notch1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_3
Ank_5
Ank_4
EGF_DL_JAG
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
134088708
NCBI-ProteinID:
XP_062398786
LinkDB
All DBs
Position
8:complement(13507405..13541969)
Genome browser
AA seq
2507 aa
AA seq
DB search
MHRFLVKFTTLLVLIALTKGQGCTGPDLCLNGGICEPTPNGRGECKCPEKYLGTRCEHYN
PCYASPCENGGTCQVASRGNRFEAVCHCRHGFMDKLCLTPTDNVCLTSPCRNGGTCELLS
PRDYRCRCRSGWSGKTCQQADPCASNPCANSGTCRAFESHFLCDCPSTFYGQTCKQDVNE
CTQNVNICKNGGTCVNEVGTYHCRCPQEYTGKHCETLYMPCNPSPCHNGGTCVQKGDTTY
QCTCLPGFNGQNCEHNINDCTDHMCENDGVCVDGVNTYNCRCKPEWTGQLCREDVNECDL
MPNACQNGGTCLNSLGGYHCVCVNGWSGDDCSENIDDCADAACSGGATCHDRVASFYCEC
PPGKTGLLCHLEDACISSPCKKGSNCDTNPVNGKAICTCPAGYVGPSCDTDVDECALAGS
NPCEHGGKCLNTKGSFQCRCPAGYIGARCELDVNECMSNPCQNDATCLDQIGGFKCICMP
GYEGIYCQVDTNECTSMPCLNNGKCIDKINSFECQCPTGFSGSQCQVDADECASTPCKNG
AKCTDGPNKYTCECTEGYTGQHCELDIDECASNPCHYGTCKDGLASFSCQCRAGYTGRLC
ETNINECLSQPCQNGGTCQDSVNAYRCLCPKGTSGINCEIDLDDCKSNPCDSGTCIDKIN
GYECTCKPGYTGTMCNINIDECQSNPCHNGGTCVDGINGFTCQCREGFQDPTCRSQINEC
LSNPCIHGHCQDQVNGYNCICDNGWSGQNCDINNNECDSNPCMNGGSCRDMTSGYYCTCR
AGFSGPNCQTNINECASNPCLNQGNCIDDVAGYKCNCILPYTGENCETLLEPCAPKPCKN
GGECREAEDYESFSCVCPKGWQGQTCEIDINECVKNPCKNGASCQNTIGSYQCSCKSGFT
GRNCETDIDDCKPNPCNNGGVCKDGVNSFVCTCQPGFRGTRCEEDINECESNPCKNGANC
TDFVDSYTCTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPPGFTGSYCQH
DINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTGTT
YSCECQSGWTGLYCDVPSVSCEVAAKQQGVEVTHLCRNSGQCLDAGNTHFCRCQAGYTGS
YCEEQVDECVPNPCQNGATCTDYLGGYSCECVPGYHGTNCSNEINECLSQPCQNGGTCID
LINTYKCSCPRGTQGIHCEINVDDCTPSTDPATKEPKCFNGGECVDGVGGYHCICPAGYV
GERCEGDVNECLSNPCDPRGTHNCVQLTNNYRCECRTGYTGKRCEQVFDGCKSKPCRNGG
TCAVASNTAHGFICRCPPGFTGSTCEGDAHSCGSLHCRNGGSCISGHKSPRCLCPAAFTG
PECQYPADSPCQSNPCYNSGTCQYTSEAPYYHCICPVHFNGLLCHVLDYRFPGGPGVDIT
PAPEVEASCEIDDCNARSADGVCDSKCNKYACDWDGGDCSLNFDDPWKNCSAALQCWRYF
DDGKCDEQCNNAGCLYDGFDCQHLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNVPEKLAVGRLVLVVRIPPEQLRSNFSGFLRELSRVLHTNVVIRRDAKGEPMIYPYY
GNEQELKKHSVKKRSVAAGRWADVRASVVATLTDGVHRVVNLRRRRELDQMQIKGSVVYL
EIDNRQCIQQSTECFQSATDVAAFLGALHSSGNLDMPYVIEAVASENTQPPPNELYPIYV
VLAGLVMLAFVAVGMVASRKRRREQGQLWFPEGFKASESNKKKRREPVGEDSVGLKPLKN
LSDISLMDDNQNEWGDEEPSEHKRFRFEEQAMLDLDDHTDHRQWTQQHLDAADLRIPSMA
PTPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDTSANVINDFIYQGA
NLHNQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQ
ILIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAVDDFGKSALHWAAAV
NNMDAAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPR
DIAQERMHHDIVRLLDEYNLVRSPPVHSAPLANSLSPPLCSPNGYLNGMKPAAQNKKARK
PGSGSAKGLACKDGGKDMKNKKKKEAGRGGGGGGLLDSSAVLSPVDSLESPHGYISDVSS
PPLMTSPFHHSPTSMALGHLQALPPEAHLAGVNHLGMGGKQFDPLPPRLTHLPMASAGNG
PCDWLSRMHGGMGQQQQQFNTLGANRGPPGGMGHQGNGQVSHGLMHNGLSSSALSQMMGF
PGMPSSHLGNQTHLMQGQPMQQMQQTLQQHSNPPSSVSPGFISADMGGPDVIQQGTGGNG
GNGSLPIHTILPQETQIMSAQLGPGLASTQFLTPPSQHSYSATMEGNTPNHQLQVPDHPF
LTPSPGSPDQWSSSSPHSNMSDWSEGISSPPNSMQSQMGHIPNDHFK
NT seq
7524 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgattcctggtaaaatttaccactctactcgtattgatagctctaacgaaaggg
caaggatgcactgggcctgacttgtgcctgaatggaggcatctgtgagcccacccccaat
ggcagaggagaatgcaagtgtccggagaaataccttggaacaagatgtgagcactacaac
ccctgttacgccagcccctgtgaaaatggcggcacgtgccaagtggctagccgcggcaac
cggttcgaggccgtctgccattgccggcatggctttatggacaagctgtgcctgacgccc
acggacaacgtgtgtttgacctccccttgccgaaatggaggcacctgcgagcttctcagc
cccagggactaccggtgtagatgccgctctggatggtcaggtaaaacatgccagcaggca
gacccctgtgcctcgaacccctgtgccaacagcggcacctgtcgagccttcgagtctcat
ttcttgtgcgactgcccgtccaccttctacggacagacctgcaagcaggacgtcaacgag
tgcacccagaacgtcaacatctgcaagaacggtggcacctgtgtcaatgaggtgggcacg
taccattgccgctgcccgcaggagtacactggcaaacactgcgagaccctctacatgccc
tgcaatccttcgccctgccacaatgggggaacatgtgtgcagaaaggagataccacctac
cagtgcacttgccttccaggtttcaatggacagaactgtgaacacaacatcaatgactgc
acagaccacatgtgtgagaatgacggtgtatgtgtggacggagtgaacacttacaactgc
cgatgcaagccagagtggacaggtcagctctgccgggaggacgtcaacgagtgtgacctg
atgcccaacgcctgccagaacgggggcacctgcctcaactccctaggcggctaccactgc
gtgtgcgtgaacggctggtcgggagacgactgcagcgagaacatcgacgattgcgccgac
gcggcctgttccggcggcgccacctgccacgaccgcgtggcgtccttctactgcgagtgc
ccacctggtaaaacaggtctgctctgccatttggaggatgcctgcataagcagtccgtgc
aaaaaagggtccaactgcgacacgaatcccgtgaacggcaaagccatctgcacctgtccc
gcgggctacgttgggccgtcctgcgacactgacgtcgacgagtgcgcgctggcaggttca
aacccgtgtgagcacggagggaagtgtctcaacaccaagggctcgtttcagtgccgatgc
cctgcgggctacataggtgcccgctgcgagctcgatgtcaacgagtgcatgtcgaacccc
tgccaaaacgacgcgacgtgcttggaccagattggaggcttcaaatgcatctgcatgcca
ggctacgagggaatctactgccaggtcgataccaacgagtgcaccagcatgccctgtctg
aacaatgggaagtgcatcgacaagatcaacagctttgagtgccagtgccccacaggcttc
agcgggagccaatgccaggtggatgcagacgagtgcgccagcaccccatgcaagaatggc
gccaaatgcacagacgggcccaacaagtacacatgtgaatgcactgaaggttacaccgga
cagcactgcgagctcgacatcgacgagtgcgcgtccaacccctgccactacggcacgtgc
aaggacggcctggcctccttcagctgccagtgcagggcgggctacaccgggcgcctgtgc
gagaccaacatcaacgagtgcctcagccagccgtgccagaacggaggcacctgccaggac
agcgtcaacgcctaccgctgcctctgccccaagggcacctcaggtatcaactgtgaaatc
gacctggatgactgcaaaagcaacccgtgcgactccgggacgtgcatcgacaagatcaac
ggctacgagtgcacgtgcaagccaggctacacaggaaccatgtgcaacatcaacattgac
gagtgccagagtaacccgtgccataacgggggcacctgtgtggatggcatcaacggcttc
acctgccagtgtcgtgagggcttccaggaccctacctgtcgctcgcagatcaacgagtgc
ctaagcaacccctgcatccatggccactgtcaggatcaggtcaacggctacaactgtatc
tgtgacaacggctggagcggccaaaactgcgacatcaacaacaacgagtgcgactccaac
ccctgcatgaacggaggcagctgccgcgacatgaccagtggctactactgcacgtgccgg
gctggcttcagcggtcctaactgccaaactaacattaacgagtgtgcctccaacccatgc
ctcaaccaaggcaactgtatcgatgatgtggctggctacaaatgcaactgcatactgcct
tacactggggagaactgcgagaccttgctggagccctgtgcgcccaaaccctgcaagaac
gggggcgagtgccgcgaggcggaggactacgagagcttctcctgcgtctgtcccaaaggc
tggcaaggtcagacctgtgagatcgatataaatgagtgtgtgaagaatccctgtaagaac
ggagcctcctgccaaaacactattggcagctaccagtgcagctgcaaatccgggttcacc
ggacgcaactgtgagaccgacattgacgactgcaagcccaacccgtgcaacaacggcggc
gtctgcaaagacggcgtgaacagcttcgtctgcacgtgccagccgggcttccgcggcacc
cgctgcgaggaggacatcaacgagtgcgagagcaacccgtgcaagaacggtgcaaattgc
acggacttcgttgatagttacacgtgcacgtgcccgccgggcttcagcggaatccactgt
gagaacaacacgcccgactgcacagagagttcctgcttcaatgggggcacctgtgtggat
ggcatcaacaccttcacctgcctatgtccaccgggtttcaccggcagctattgccaacac
gacatcaacgagtgcgactccaagccatgtctgaatggaggcacgtgccaggacagctat
ggcacctacaagtgtacctgccctcaaggctatactggactcaactgccagaacctggtg
cggtggtgcgactcctctccgtgcaagaacgggggcaagtgctggcagactggcaccacc
tacagctgtgagtgccagagcgggtggacagggctctactgtgacgtgcccagtgtgtcc
tgtgaagtggccgccaaacagcaaggtgtggaggtgacccacctgtgccgtaactctggt
cagtgtctggacgctggcaacacgcacttctgccgctgccaggcgggttacactggcagc
tactgcgaggagcaggtggatgagtgtgtgcccaacccctgtcaaaacggagccacttgt
actgattacctgggagggtactcctgcgagtgtgttcctggctatcacgggacaaactgc
tccaacgagatcaatgagtgcctctcgcagccctgccaaaacggaggaacctgcatcgat
ctgatcaatacctacaaatgctcgtgtccccggggaacccaaggtatccactgcgagatc
aacgtggacgactgcaccccgtccaccgaccccgccaccaaggagcccaagtgcttcaac
ggcggcgagtgcgtggacggcgtgggcggctaccactgcatctgcccggccggctacgtg
ggcgagcgctgcgagggcgacgtcaacgagtgcctgtccaacccctgcgacccgcgcggc
acgcacaactgcgtccagctcaccaacaactaccgctgcgagtgccgcaccggatacaca
ggcaagcgctgtgagcaggtgtttgacggctgtaagagcaagccctgtcgtaatggaggc
acctgtgcggtggccagcaacacggcccatgggttcatctgcaggtgtccaccgggcttc
actggctccacctgtgagggtgatgcccactcgtgtggctctctgcactgccgcaacggc
ggctcctgcatctcgggccacaagagcccgcgctgcctgtgcccggccgccttcaccggg
cccgagtgccagtacccggccgacagcccgtgccagagcaacccgtgctacaacagcggc
acgtgccagtacaccagcgaggcgccctactaccactgcatctgcccggtccacttcaac
ggcctgctgtgccacgtgctggactaccgcttccccggcgggcccggcgtcgacatcacg
ccggcgcccgaggtggaggccagctgcgagatcgacgactgcaacgcgcgctcggccgac
ggcgtgtgcgacagcaagtgcaacaagtacgcgtgcgactgggacggcggcgactgctcg
ctcaacttcgacgacccgtggaagaactgctcggccgcgctgcagtgctggcgctacttc
gacgacggcaagtgcgacgagcagtgcaacaacgccggctgcctctacgacggcttcgac
tgccagcatctggagggccagtgcaacccgctttacgaccagtactgtaaggaccactac
gccgacgggcactgcgaccagggctgcaacaacgccgagtgcgagtgggacggcctggac
tgcgccaacaacgtgccggagaagctggcggtgggccggctggtgctggtggtgcgcatc
ccgcccgagcagctgcgcagcaacttctcgggcttcctgcgcgagctgagccgcgtgctg
cacaccaacgtggtgatccgccgcgacgccaagggcgagcccatgatctacccgtactac
ggcaacgagcaggagctcaagaagcactcggtcaagaagcgctcggtggcggccggccgc
tgggccgacgtcagggccagcgtcgtggccacgctgacggacggcgtgcaccgcgtggtc
aacctgcggcggcgccgggagctggaccagatgcagatcaaaggctcggtggtgtacctg
gagattgacaaccggcagtgcatccagcagtccaccgagtgcttccagagtgccactgat
gtggcggcgttcctaggagccctgcactccagtggcaacctggacatgccctacgtcatc
gaggctgtggccagcgagaacacccagccgccgcccaacgagctctacccgatctacgtg
gtgctggccggcctggtcatgctggccttcgtggccgtgggcatggtggcgtcccgcaag
cggcgccgcgagcagggccagctctggttccccgagggcttcaaggccagcgagtccaac
aagaagaagcgccgcgagccggtcggcgaggactccgtcggcctcaagccgctgaagaac
ctgtcggacatctccttaatggacgacaaccagaacgaatggggagacgaggaaccatca
gaacacaagcgctttaggtttgaggagcaggcgatgctggacctcgatgaccacacggac
caccggcagtggacccaacagcacctggatgctgccgacctccgcatcccctccatggcc
cccacacccccacagggcgaaatcgagaacgactgcatggatgtgaatgtccgtggacca
gatggcttcactcctctgatgatcgcgtcctgcagcggaggcggtctggagacgggcaac
agcgaggaggaggaggacacttcggccaacgtcatcaacgattttatttaccagggcgcc
aacctgcacaaccagacggaccgcacgggcgagacggcgttgcacctcgccgcccgctac
gcccgctccgacgccgccaaacgcctcctggaggccagcgccgacgccaacatccaggac
aacatgggccgcacacccctccacgccgccgtggctgctgacgctcagggagtcttccag
attttgattcggaatcgtgccacggacctggacgcccgtatgcatgacggcacgacccct
ctgatcctggctgcgcgactggcagttgaggggatggtggaggagctgatcaactgccac
gccgacgtcaatgcggttgatgactttggcaaatccgctcttcactgggcagcagctgtg
aacaacatggatgcagccatggttcttctgaaaaatggagcgaacaaggacatgcagaac
aataaggaggagacgcccctgttcctggcagcccgcgagggcagctacgagacggccaag
gtcctgctggagcactttgccaaccgcgagatcacggaccacatggaccgtctgccgcgc
gacatcgcccaggagcgcatgcaccacgacatcgtgcgtctgctggacgagtacaacctg
gtgcgcagcccgcccgtgcacagcgccccgctggccaacagcctgtcgccgccgctctgc
tcgcccaacggctacctgaacggcatgaagccggccgcgcagaacaagaaggcccgcaag
cccggcagcggctcggccaaaggcctggcctgcaaggacggcgggaaggacatgaagaac
aagaagaagaaggaggccggccgcggcggcggcgggggaggcctgctggacagctcggcc
gtgctctcgcccgtggactcgctggagtcgccgcacggctacatctcggacgtgtcgtcg
ccgccgctcatgacctcgcccttccaccactcgcccacgtccatggcgctgggccacctg
caggcgctgccgcccgaggcccacctggccggcgtcaaccacctgggcatgggcggcaag
cagttcgacccgctgcccccgcgcctcacccacctgcccatggccagcgcgggcaacggc
ccgtgtgactggctgtcccggatgcacggcggcatgggccagcagcagcagcagttcaac
acgctcggcgccaaccgcggcccgccgggcggcatgggtcaccagggcaacggccaggtg
tctcacggcctgatgcacaacgggctgtcctcgtcggcgctctcgcagatgatgggcttc
ccgggcatgcccagcagccacctgggcaaccagactcacctgatgcagggccagcccatg
cagcagatgcagcagacgctgcagcagcactcgaacccgccgagcagcgtgagcccgggc
ttcatctcggccgacatgggcggccccgatgtcatccagcagggcacgggcggcaacggc
ggcaacggctcgctgcccatccacaccatcctgccccaggagactcagatcatgtccgcc
cagctcgggcccggcctggccagcacccagttcctcacgccgccctcgcagcacagctac
tctgccaccatggagggcaacacgcccaaccaccagctccaggtgcccgaccaccccttc
ctcaccccgtcccccggctccccagaccaatggtccagctcctctccacactccaatatg
tctgactggtccgagggcatctccagcccgcccaatagcatgcagtcgcagatggggcac
attccaaatgaccactttaagtaa
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integrated database retrieval system
