Sardina pilchardus (sardine): 134088724
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Entry
134088724 CDS
T10667
Symbol
poli
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
134088724 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spil03400
]
134088724 (poli)
Enzymes [BR:
spil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134088724 (poli)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
134088724 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
UBM
IMS_HHH_1
IMS_HHH
MgtE_N
Cdd1
HHH_5
POLH-Rev1_HhH
DUF1980_C
DUF4332
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
134088724
NCBI-ProteinID:
XP_062398808
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All DBs
Position
8:complement(14076537..14081241)
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AA seq
715 aa
AA seq
DB search
MDIDDEDDDWNVSAESSDMFVMGLSSDPVGEAPSSSRVILHFDLDCFYAQVEMIRNPALR
NKPLGIQQKYIIVTCNYVARDQGLTKLMSVTDALEKCPQLVLVKGEDLTHYREMSYKVTE
LLMSYCPLVERLGFDENFLDVTEMVDTKMEQAPSTELTFSGHIYNEESLAASASDHPRLA
MGSLIAAELREAIKSNLGLTSCAGVATNKLLAKLVSGTFKPNQQTTLLPESTADIMASLS
GLRKVPGIGHRTGQRLKALGLLTVRDLQCFPPAELAREFGAASAQRLQNLSQGIDDSLVT
PAGPPQSLSDEDSFKKMSSTTEVLKKVEELLTSLMERMHKDGRQPATFRLTIRRFSATNR
YFSRESRQCPIPNHIGQKITTGSCDALAQLLSMAMKLFQKMIDTNTPFHLTLINVCFSNL
QSKSDGKGSITSFFTQRSPKKVTSVSQQQDNLSVKGFSTCTGSPENCSTFANDTLDVRVS
RSTPPMPSEQKQPPLLRKFIGTPLSVKPPMPEWTQVPAVPNELHRPSQPLEPDLSHLPPD
VDPDVFKHLPESIQQELLSSFQAGERGDRQGTSSQSVTAISCNQKPTNQLTKPPSKQSSI
AAHSAGSDNGDDRAKQTADQTFFSAHRERLRISCAEQPEGNSRASNTECPSNVDPLVFSE
LPPELQQELLSEWKQQKPVLKIPSKKLERTAPTKDKKATTKAGQANNLLNYFKSN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggacattgatgatgaagatgatgactggaatgtcagtgcagaatcttcagatatgttc
gtcatggggttgtccagtgatcctgtcggcgaagccccctcctcctccagagttatcttg
cattttgacttggactgtttttacgcacaggtggaaatgatcagaaaccctgcattacgc
aacaaacctttaggcattcaacaaaagtacatcattgtcacttgcaactatgtggcaaga
gatcagggtttgaccaaactgatgtcagtgacggatgcactagaaaaatgtcctcagctg
gtgttggtcaaaggcgaggatctcactcactacagagagatgtcttacaaagtaacagag
cttctgatgtcatattgtccactagtggagagactaggctttgatgaaaacttcttggat
gtgactgagatggtggacaccaagatggaacaggctccatctacagaattgaccttcagt
ggacacatctacaatgaggaatcgcttgcagcaagtgcgagtgaccacccacgactagcc
atggggtctcttattgctgcggaattaagagaggccatcaagagcaaccttgggctcact
tcctgtgctggagtcgcaacgaataagctgctagccaagctggtgtcaggtaccttcaag
ccaaaccagcagaccactctactgccagagagcactgcagacataatggcaagcctaagt
ggactacgaaaagtgcctggcataggacacaggactggccaaaggctgaaggctctcggc
ctcctcacagtgagagacctccagtgcttccctccagctgagcttgccagggagtttgga
gctgccagcgctcagcgcttgcagaatctgtcccaagggatcgatgattccctcgtcacc
cctgctggacctcctcagtcgcttagtgatgaggactccttcaagaagatgtcctcaaca
actgaggttctgaagaaagttgaggagctcttgaccagcctgatggagagaatgcacaag
gatggaagacagccagccaccttccgcctgacaatcagacgcttttccgctacgaatcgc
tatttcagccgcgagagtcggcagtgccccatacccaatcacattggacagaagatcact
acaggaagttgcgatgctttagcccagcttctcagcatggccatgaagctatttcagaaa
atgattgacaccaacactccctttcacctcacactgatcaacgtgtgcttcagcaacctg
cagtcaaagagtgacggcaaaggctccataacgtccttcttcacacagaggtcacccaaa
aaagtgacatcagtctctcagcaacaggataatctgagtgttaaaggatttagcacgtgc
acgggttctcctgagaactgttctacctttgcgaacgacacattggacgtgagggtctct
cggagcacaccacccatgccatcagagcaaaaacagcctcctctgctgaggaagtttatt
gggactcctctctctgttaagccgccaatgcccgagtggacccaggtgccagcagttccg
aatgagctgcacagacccagtcagccactggagccagacttgtcgcacctgcccccggat
gtcgacccagacgtgttcaaacacctcccagagagcatccagcaggagcttctgtctagt
ttccaggcaggagaacgtggggaccggcagggaactagcagtcagtcagtcactgcaatt
tcctgcaatcagaaaccgactaatcaactgactaaaccaccctcgaagcagtcaagcatt
gcagcacactctgctggctcagataatggcgatgaccgcgccaaacagaccgctgatcag
acatttttctctgcacacagagaacgacttcgcattagctgtgctgagcagcctgaggga
aacagcagggcatctaatacagaatgcccttcaaatgtggaccccttggtcttttctgag
ctgcccccagagttgcagcaagaactgctatcagagtggaagcaacaaaagcctgtgctg
aaaatcccctccaagaagttggaaaggactgcccccaccaaagacaaaaaagccactacc
aaagctggtcaggcaaacaacctgctgaattattttaaatctaactga
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