KEGG   Sardina pilchardus (sardine): 134088870
Entry
134088870         CDS       T10667                                 
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    134088870 (nelfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spil03021]
    134088870 (nelfb)
Transcription machinery [BR:spil03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     134088870 (nelfb)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 134088870
NCBI-ProteinID: XP_062399017
LinkDB
Position
8:17721303..17728716
AA seq 583 aa
MFAGLSELGISNGEDLKETLTNCTEPLKAIDQFQMENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVATIAEGKEEDRYSKLEELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKQVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDL
SILHNFFSPSPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICLVDPCHKFTWCLDACIREKFVDAKRARELQGFLDGVKKGQEQVLGDL
SMILCDPFASNTLVLSTVRNLQELLSQDALPRDSPDLLLLLRMLCLGQGAWDMIDSQVFK
EPRLELEVVTRFLPAMMSIVVDDYTFTVEQKLPSEEKTSITYPTLLPDTFTKFLQENRVA
CEMGLYYVLHIAKQRNKNALQRLLPALVETHNDAAFGDIFLHLLTGHLTLLSDEFGAEEF
CAAVFDTFLLTSCSSKENVHRHTLRLLNHLCLKVQPSVMETLVKTLEPPKQCSEPVKELY
TQLTEKLEAQKKSPPEPEEPPSLDLGLHPITVPTTPATPTTPL
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgtttgcggggctaagtgaactgggcatatctaatggcgaagatttgaaagaaactcta
acaaactgcacagaaccactgaaagccattgaccagtttcagatggaaaatggcatattg
ctgccaacgctgcagtctgctctaccatttctggatcttcatggtactccaagactcgag
ttccatcagtcggtttttgacgaactgcgtgacaagttgatggagcgagtcgccacaata
gcggaaggaaaggaggaggataggtattctaaactggaggagttattggagaaaagtttt
cccctagtgaagatgccctccattcagcctgtagttatgcaggttctcaaacacctgcca
aaggtccctgagaaaaagctgaaacaggtgatggctgataaagagctctacaaggtctgt
gctgttgaagtgaaaagacagatctggcaggacaaccaggctctgtttggagacgaagtg
tcccctctgctgaagcagtatattgtggagaaagaggctgcactctttagcagtgatctc
tctatattgcataacttctttagtccttcacccaagacacgacgccaaggagaggttgta
ctaaaactgacccagatgatcgggaagaatgtaaagctgtatgacatggtgctgcagttt
ctgcgcacacttttcctgcggacacgcaacgtccactactgtactctgcgggcagagctt
ctcatgtcccttcatgaccttgacatcagtgagatctgtttagttgatccttgtcataag
ttcacctggtgtctggatgcatgcatcagggaaaagtttgttgacgccaagagagccaga
gagttgcaaggctttctggacggggtcaagaaagggcaggaacaagtactgggggatctt
tctatgatactctgtgacccatttgccagtaacaccctggtgctgagtactgtaagaaat
ctgcaggagctgcttagccaggatgctcttcccagggacagcccagacctactgctacta
ctaagaatgctgtgtctgggacaaggcgcgtgggacatgatcgacagtcaagttttcaaa
gagcctcgactggaactggaggtggttactcgttttctgcccgccatgatgtcaatagtg
gtggacgactacaccttcactgtggagcagaagttgccgagtgaggagaagacctccata
acctaccccacccttctgcctgacaccttcactaagtttcttcaggagaacagagttgcc
tgtgagatgggtctgtattatgtgctccacattgccaagcagaggaacaaaaatgccctg
cagagattgcttcctgctctagtggagactcacaatgacgcagcatttggagacatcttt
ctgcatctcctgactggtcacctgactctgctgtccgacgagtttggagcggaagagttt
tgcgctgctgtttttgacacatttctactgacctcctgctccagcaaggagaatgtgcac
aggcacacactacgccttttgaaccacctctgtctgaaagtgcagccctccgtcatggaa
accctagtgaagactctcgagcctcctaaacagtgcagtgagcctgtgaaggagctctac
acccagctgacggagaagctggaggcccagaagaagagtccccctgagcctgaggagccc
ccctccctggatctgggcctgcaccccatcacggtcccgaccaccccggccacccccact
acccctctctga

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