Sardina pilchardus (sardine): 134088982
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Entry
134088982 CDS
T10667
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134088982 (zfr)
Spliceosome [BR:
spil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134088982 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
DUF4484
DUF3915
zf-U1
Motif
Other DBs
NCBI-GeneID:
134088982
NCBI-ProteinID:
XP_062399204
LinkDB
All DBs
Position
8:complement(21972670..21997792)
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AA seq
1109 aa
AA seq
DB search
MIPICPVVSFTYVPGRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAATAAAYGGYQPAHAATDYAYAAQRQP
EVPPPPPPVTSQNYQDTYSYVRSTAPTMAYDSKQYYQQPTATAAVAAAAQPQPSVAESYY
QTAPKTGYTQGVTPYTQTQQTRQVTAIKPATPSPATSTFSIYPVSSAVQPVAAASVVPSY
SQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQQKQAVAAAAATAAWTGSTF
TKKTPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSS
SSSGAGGAGSSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPST
EPSVVTQTSSATTAAPSKASAGGSASAGSSGPGGGGAMGTSVPSPSPASAAGAASSSYLK
PIGMANSASAAAATAVQGKNPAASGLPANGSVVKKANTPKINFVGGSKLQTTGVKADDAK
AETAKPAPASLAAQSPDMKIESSDSLSAQSALAALQSDVQPVGHDYVEEVRNDEGRVIRF
HCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQLQK
EEYWRRREEEERWRMEMRCGRYEEDMYWRRMEEEQHHWDDRRRMPDGGYPQGPPGPPGLL
GVRPGMPIPQPQGPVPLRRPDTSDDRYVMTKHAAIYPSEEELQAIQKIVSITERALKLVS
DIITDQDKGKEEDKEKDKDKEKEKEKEKEKKEIPKDRALKGVMRVGVLAKGLLLRGDKNV
NLVLLCSEKPTKNLLTRIVEHLPKQLTLVTPEKYEVKGSIQEAAIILTSGAEPKMQVTIT
LTSPIIREENARDGDVTSGMVKDPADVLDRQKCLDALAALRHAKWFQARANGLQSCVIII
RILRDLCQRVPTWSAFPSWAMELLVEKAISSASGPLSPGDALRRVFECISSGILLPGGPG
LIDPCEKNPTDTLAAMEEQQREDITSSAQFALRLLAFRQIYKVLGMDPLPQMNARFNVRN
NRKRRRDNSDGTDGFEAEGKKDKKDHEGF
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtctccttcacctatgtgcccggccggctaggtgaagat
gccaaaatggctaccggcaactattttggatttacccatggtgctgctgcgcagtacagt
cagcagccggccgctggggttgcctacacccaccccaccacagtggccagctatactgtg
caccaagcaccagtggcggctcacacggtggcggcagcctacgccccgacggccgccaca
gttgccgtagccagacctgcgcccgtcgccgtagccgccgcggctacggcggcggcgtac
ggtgggtatcagccggcgcacgcggccaccgattacgcctacgctgcccagcggcagccc
gaggtcccgccgccccctcccccggtcacgtcccagaactaccaggacacgtattcgtat
gtgcgctccacggctccaaccatggcttatgacagcaagcagtactaccagcagcccaca
gccaccgccgcagtagcagctgccgcacagccacagcccagcgtggccgagtcctactac
cagacagcgcccaaaacaggttacacgcagggagtcaccccttacacccagacccagcag
acgcgtcaggtgacggccatcaagcctgccacccccagccccgccacctccaccttctcc
atctacccagtgtcctcggcggtgcagccggtcgcggccgcctccgttgtcccgtcctac
tcccagagccccacctatagtacaaatgcagtcacctattcaggtacgtcatactcgggt
tacgaggcggccgtgtactcggccgcctcctcttactaccagcagcagcagcagcagcag
cagcagaagcaggcggtggcggctgccgcggccacggccgcctggaccggcagcaccttc
accaagaagacgcccttccagaacaagcagctgaagcccaagcagccgcccaagccgccc
cagatccactactgcgacgtctgcaagatcagttgcgccggaccgcagacctataaggag
cacctggagggccagaagcacaagaagaaggaggcggccctgaaggtgtcccagagcagc
agcagcagcggagcgggcggcgccggcagctcggcccgcggcacccagaaccagctgcgc
tgcgagctctgcgatgtctcctgcaccggcgccgacgcctacgccgcgcacatccgcggt
gccaagcaccagaaggtcgtcaagctacacaccaaactgggcaagcccatcccttccaca
gagcccagcgtggtcacccagacctccagcgccaccacagcggcgcccagcaaggcctcg
gcagggggctcggcgtcggcgggcagctccggtccgggcggaggcggggcgatgggcacc
agcgtgccctctccatctccagcgtccgcggcgggcgccgccagctcgtcctacctgaag
cccatcggcatggcgaacagcgccagcgcggcggcggccacagcggtgcagggcaagaac
ccggcggccagcggcctgcccgccaacggcagcgtggtcaagaaggccaacacccccaag
atcaactttgtcggaggaagtaagttacagaccacaggtgtcaaggccgatgacgccaaa
gcagagacggcaaaacctgccccagcctcattggctgcacagtctccggacatgaagatc
gagtcctctgattcgctgtcggcgcagtccgccctggctgccctgcagagcgatgtccaa
ccagtcggacatgactacgttgaagaggtacgtaacgatgaaggcagggtgatccgcttt
cattgcaagctgtgtgaatgtagtttcaacgatccaaacgccaaggagatgcatttaaaa
ggacgaagacatcgtctccagtacaagaaaaaggtcaacccagatctccaggtggaggtg
aagcccagtatccgagcgcgcaagatccaggaggagaagatgaggaagcagctgcagaag
gaggagtactggaggaggagagaggaggaggagcgctggaggatggagatgaggtgtggg
cggtacgaggaggacatgtactggcgccgcatggaggaggagcagcaccactgggacgac
cggcgcaggatgcctgacggaggttacccccaggggccgcccggcccgccagggctcctg
ggcgtgcgacccggcatgcccatccctcagccgcagggcccagtgccccttcgccggccc
gacacctcggatgaccgttacgtcatgaccaaacatgcggccatctacccctccgaggaa
gagctgcaggccatccagaagattgtgtcaatcactgagcgggctctcaagctggtgtcc
gacatcatcacggaccaagacaagggcaaggaggaggacaaggagaaggacaaggacaag
gagaaggagaaggagaaagagaaggagaagaaggagatccctaaggaccgagctcttaag
ggtgtaatgagagttggcgtgttggccaaaggcctgctcctgcgcggggataagaacgtg
aacctggttctcctgtgttccgagaagcccaccaagaacctgctgacccgcatcgtggag
caccttcccaagcagctcacgttggtgacacctgagaagtacgaggtgaagggctccatc
caggaggcggccatcatcctcacctccggcgccgagcccaagatgcaggtgaccatcacc
ctgacgtcgcccatcatccgcgaggagaacgcccgtgacggagatgtaacctcgggtatg
gtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggctgctcta
cgccacgctaagtggttccaggctagagctaacggactccagtcctgtgtcataatcatt
cgcattctacgggacctgtgtcagcgagtgcccacgtggtctgcctttccaagctgggcc
atggagctcctggtggagaaggccatcagcagtgcatccggccccctgagtcccggagat
gccctgcgtcgagtctttgaatgtatttcctccggcatcctgctccctggtggtcctggg
ttgattgacccatgtgagaagaatcccacagacacgttggcagccatggaggagcagcag
agagaggatataacctcaagtgcccagtttgccctaaggctgctcgcgttccgccagatc
tacaaagtcttgggcatggacccactgccccagatgaacgcccgcttcaacgtgcgcaac
aaccgcaagcgccgacgtgacaacagcgacgggacggacggcttcgaagccgaggggaag
aaggacaagaaggaccatgaaggcttctaa
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integrated database retrieval system
