Sardina pilchardus (sardine): 134089010
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Entry
134089010 CDS
T10667
Symbol
poll
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03410
Base excision repair
spil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134089010 (poll)
03450 Non-homologous end-joining
134089010 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spil03400
]
134089010 (poll)
Enzymes [BR:
spil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134089010 (poll)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
134089010 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
134089010 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
LIG3_BRCT
HHH
NTP_transf_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
134089010
NCBI-ProteinID:
XP_062399250
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All DBs
Position
1:complement(35203171..35210067)
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AA seq
575 aa
AA seq
DB search
MEAHGILKAFPKVKRSKIVETKDAPPPKKKPGEIVTGSVFQGVSIHILPAGIGKARCEIF
QRQITQNGGKIENALGPGVTHVIVEDTMDCERALRLLKADTLPSSVKLVKCSWLSMCISE
KRLLDTTAHCLLLPDSRDTQGNKSKAKEEPVKHNSTKEDVTQQHDFQTVHEDPAHTMTQT
QTQTQEGKDNYGDEDGVSQNDLDALMGGHHPTVGPSSPPDTTAATATATAPPPPSLPGKW
VCAQSSVAKCNNHNKHLTDKLEPLAKAYTHKGDRWRALGYSKAINALKSYHKPVTSYEEA
CQIPGIGHKMADKIMEIMESGHLRKLDHMGEDVPVLELFSNIWGVGAKTALLWYQMGFRT
LDDIRTKATLNHTQQIGLKHYDDFLDRMPREEAAAIEKTVREAAHAVDPGLVSVACGSYR
RGKATCGDVDVLITHPDGKSHRGIFSKVLHILHESGFLTDDLVSSEDNGEQKKYMGVCRL
PGPGQRHRRLDVIVVPHGEFACALLYFTGSAHFNRSMRALAKTKRMSLSEHSLNCNVLRQ
GAAKVAAGSPLPTHSERDVFTHLGVPYREPHERDW
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccacggtattttaaaagcatttccgaaagtgaagcgatcaaagatagtcgag
accaaggatgcacctccacccaagaagaagcccggtgaaattgtaacaggctctgtgttc
caaggtgtctctatacacatccttccagctggcattgggaaagccagatgtgagatcttc
cagagacagatcacccagaatgggggaaagattgagaacgcattaggccctggtgtgacc
catgtcattgtggaggataccatggactgcgagcgagcgttgaggctgctgaaagcagac
accttgccttcctcggtcaaattggtgaagtgttcttggctgagcatgtgcatatctgaa
aaacggttactggacactacagcccactgtcttctccttccagacagcagagacacgcaa
ggcaataaaagcaaggcaaaagaagagcctgttaaacacaactctaccaaagaagatgtg
acacaacagcatgacttccaaacagtgcacgaagacccagcacatacgatgacgcaaacg
cagacgcagacgcaggaaggcaaagacaactacggggacgaggatggcgtgtcccaaaat
gacctggatgcactgatgggtggccatcaccctacggtgggtccctcgagcccgccggac
accacggctgccaccgctaccgccaccgcgccaccaccgcccagcctgcccgggaagtgg
gtctgtgcccagtcctccgtggccaagtgcaacaaccacaacaaacacctgaccgacaag
ctagagcctctggccaaggcctacacacacaagggggacaggtggcgcgccctgggctac
tccaaagccatcaacgccctgaagagttaccacaagccagtcacgtcttatgaggaggcg
tgtcagatccctggcatcggccacaaaatggccgacaagatcatggagatcatggagagc
ggacacctgcgcaagctggaccacatgggggaggacgtgcccgtgctggagctgttctcc
aacatctggggcgtgggagccaaaaccgcgctcctctggtaccagatggggtttcgcacc
ttggacgacatccgtaccaaagcaactttaaatcacacgcagcaaattggcctgaaacac
tacgacgactttctggatcgaatgccgcgcgaagaagcagccgccatcgagaagacggtc
cgggaggctgctcacgccgtagacccgggcctggtgtcggtggcctgtggctcctaccgt
cgagggaaggccacgtgcggagacgtggacgttctcatcactcacccggacggaaagtcc
cacaggggcatcttcagcaaagtcctgcacatcctgcacgagagtggctttctcacggac
gacctggtgagcagcgaggacaacggcgagcagaagaagtacatgggcgtgtgccggttg
cccggccccgggcagcgtcaccggcggctggacgtgatcgtggtgccgcacggcgagttc
gcctgcgcgctgctctacttcacgggctcggcccacttcaaccgctccatgcgcgccctg
gccaagaccaagcgcatgagcctgtccgagcactcgctcaactgcaacgtgctgcggcag
ggcgccgccaaggtggcagcgggcagccctctgcccacgcacagcgagagggacgtcttc
acccacctgggcgtcccgtacagggagccccacgagagagactggtag
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