Sardina pilchardus (sardine): 134089027
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Entry
134089027 CDS
T10667
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134089027 (smarca2)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
134089027 (smarca2)
Chromatin remodeling factors
BAF complex
134089027 (smarca2)
PBAF complex
134089027 (smarca2)
GBAF(ncBAF) complex
134089027 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134089027
NCBI-ProteinID:
XP_062399274
LinkDB
All DBs
Position
8:complement(24090095..24136536)
Genome browser
AA seq
1624 aa
AA seq
DB search
MSTPTDPSGGMSRPGPSPGPGLSPGPILGSSPGPGPSPGSVHSMMGPSPGPPSGPHSMQS
QGPGDYSQEGMHQMHKPMEGMLEKVPMTDEMHFGQMKNVGMRTLHSGMGPPQSPMEQHSQ
GYISPHPSPMGVPEHAPSPMSNVGPTAPQMPPAQPGPMMPMDPQAMGQPGRGPSSFSPVQ
LQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQPSVNTGPYSRPPGMPMPPISG
PTPGPCPTPAMQGHAQSPAPKPWTEGQSAGEPSATPQKHPMPTPSGRPSPAPPGAQQMPQ
PMAGPLGGQQQQQQHPHQHQHQHQHQHQHPQPQPPQLPHQPSTQQQQQQHQQHQHQQQAL
QQQQQQQQQQAGQPSLIIQLQQKQNRITPIQKPQGLDPVEILQEREYRLQARIAHRIQEL
ENLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACMRRDTTLETALNSKAYKRSKRQ
TLREARMTEKLEKQQKIELERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQKLSKAVA
TWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLT
SLVYEHKAAQAAKDRKKKKKKKKLQKLEGDVEGLGAIGPDGEPMDESSQMSELPVKLIQT
ETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEDEDEAISHPDAEEKK
SANLESEKPAEHIIESAKQDVDDEYSAEAGSESLHSYYGVAHAVIERVEKQSSLLINGSL
KHYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWVYELDKWAPSIVKVAYKGTPGMRRSLLPQLRSGKFNVLITTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSAIQKVLYRHMQGRGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQH
IEESFAEHLGFGNAIISGPELYRASGKFELLDRILPKLLATNHRVLLFCQMTTLMTIMED
YFSYRNFKYLRLDGTTKSEDRALLLKQFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETLNQMIARIEDEFELFMRMDLDRRRED
ARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRSRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEIRLKKRKRRRHSDKEGRRESGEKAKKKRGRPPAEKLSPNPPKLT
KQMTAIVDTVINYRDSSGRQLSEVFVQLPSRKELPEYYELIRRPVDFKKIKERVRSHKYR
SVSDLEKDVMLLCLNAQTFNLEGSQIHEDSIVLQSVFKSARQKIAKEEESEDDNDDDDDD
EEESETESKSVRVKIKLSKREERSHDKGKKRQSRNKAKPVVSDEDSDDDPDDKEQSEGSK
SEDE
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacggacccatctggtggaatgtcccgtcctggaccatccccaggccca
ggtctgtccccgggtcccatcctgggatccagccctggtccaggcccctctcctgggtcg
gtgcacagcatgatgggccctagcccggggcctcccagtggaccccacagcatgcagagc
caggggcccggagattactctcaggaaggcatgcatcagatgcataagcccatggagggc
atgctggagaaggtgcccatgacagacgagatgcactttggccagatgaagaacgtgggg
atgaggactctgcacagtggcatgggtccgccccagagccccatggagcagcacagccaa
gggtacatatcccctcacccctcccccatgggtgtccccgagcatgcccccagccccatg
tccaacgtgggccccaccgctccccagatgccccctgctcagccgggccccatgatgccc
atggacccgcaggcgatggggcagccgggccgcggtccgtcctccttcagccctgtccag
ctgcagcagctccgtgcccagatcctggcctacaagatcctgggccgcgggcagccactg
cccgaaaacctgcagctggccgtgcagggcaagaggagcctgcccaccatgcagcagccg
tcagtcaacactgggccctacagccggccaccaggtatgccgatgcctcctattagcgga
cctaccccagggccgtgcccaacgcctgccatgcaaggacacgctcaaagtcccgcgcca
aaaccctggacggagggccagagtgctggcgagccgtccgccaccccgcagaagcacccg
atgcccacccccagcggtcgcccgtcgccagctccgcctggcgcccagcagatgccccag
cccatggccggccccttgggaggacaacagcagcagcagcagcacccgcatcagcaccag
caccagcaccagcatcagcatcagcacccccaaccgcagccgccgcagctgccccaccag
ccctccacccagcagcagcagcagcagcatcagcagcatcagcatcagcagcaggccctc
cagcagcagcagcagcagcagcagcagcaggccgggcagccctcgctcatcatccagctg
cagcagaagcagaaccgcatcacgcccatccagaagccccaggggctggaccctgtggag
atcctgcaggagcgcgagtacaggctgcaggccaggattgctcaccgcatccaggagctg
gagaacctgccgggctctctgcctccggacctgcgcaccaaagcaacagtggagctcaag
gccctcaggctgctcaacttccagcgccagctgaggcaggacgtggtggcgtgcatgcgg
cgggacaccactctggagacggcgctcaactccaaggcctacaagcgcagcaagaggcag
acgctgagggaggcgcgcatgaccgagaagctggagaagcagcagaagatcgagctggag
aggaagcgccggcagaagcaccaggagtatttgaacagcattctgcagcatgccaaggac
ttcaaagaataccacaggtccatttccggaaagatccagaagctgtccaaggccgtggcc
acatggcacaccaacacggagcgcgagcagaagaaggagacggagcggatcgagaaggag
aggatgaggaggctgatggcggaggatgaggagggctaccggaagctgatcgaccagaag
aaggacaagcgcctggcctacctgctgcagcagacggacgagtatgtggccaacctcacc
agcctggtgtacgagcacaaggccgcccaggccgccaaggacaggaagaagaagaagaag
aagaagaagttgcagaaattggagggtgacgttgaaggacttggagccatcggcccagat
ggagagccaatggacgagagcagtcagatgagcgagctgcccgtcaagttgatccagacg
gagacgggcaaagtgctgcagggcaccgacgcccccaagtccagtcagctggaggcctgg
ctggagatgaatccgggctatgaagtggccccgcgctccgacagcgaggagagcggctcc
gagtttgaggaagaggacgaggacgaggccatatcacacccggacgcggaagagaagaaa
tccgccaacctcgaaagcgagaagcccgccgagcacatcatcgagtcggccaaacaggac
gtggacgacgagtacagcgcggaggcgggctccgagagcctccactcctactacggcgtg
gcgcacgccgtcatcgagagggtggagaagcagtcctccctgctgatcaacggcagcctg
aagcactaccaggtccagggcctggagtggatggtgtccctgtacaacaacaacctgaac
ggcatcctggccgacgagatgggcctgggcaagaccatccagaccatcgccctcatcacc
tacctgatggagcacaagaggctcaacgggccctacctgatcatcgtgcctctctcaact
ctctccaactgggtgtatgagctcgacaagtgggcgccctccatcgtcaaagtcgcatac
aagggcacgccgggcatgcggcggtcgctgttgcctcagctgcgcagcggcaagttcaac
gtgctcatcaccacctacgagtacatcatcaaggacaagcacatcctggccaagatccgc
tggaagtacatgatcgtggacgagggccaccgcatgaagaaccaccactgcaagctgacg
caggtgctcaacacgcactacgtggcgccgcgccgcctcctgctcacgggcacgccgctg
cagaacaagctgcccgagctgtgggcgctgctcaacttcctgctgcccaccatcttcaag
agctgcagcaccttcgagcagtggttcaacgcgcccttcgccatgaccggagaacgggtg
gatctgaatgaagaggagaccattctgatcattcgccgtctgcacaaggtgctccgcccc
ttcctgctgcgccgcctgaagaaggaagtggaatctcaacttcctgagaaggtggagtac
gtcatcaaatgtgacatgtcggccatccagaaggttctgtatcgccacatgcagggcagg
ggcatcctgctgaccgacggctccgagaaggacaagaagggcaaaggaggcgcgaaaacc
ttgatgaacaccatcatgcagctgaagaagatctgcaatcatccttacatgttccagcac
atagaggagtccttcgcagagcacttgggctttgggaatgccatcatcagtggtccagag
ctgtaccgtgcgtctggtaagtttgagctgctggaccgcatcctgcccaagctgctggcc
accaaccaccgcgtgctgctcttctgccagatgaccaccctcatgaccatcatggaggac
tacttcagctaccgcaacttcaagtacttgcgcctggacgggaccaccaagtcggaggac
cgcgcgttgctgctgaagcagttcaatgagccgggctcgcagtacttcatcttcctgctg
agcacgcgcgccggggggctgggcctcaacctgcaggccgccgacaccgtggtcatcttc
gacagcgactggaacccccaccaggatctgcaggcgcaggaccgcgctcaccgcatcggt
cagcagaacgaggtgcgcgtgctgcgcctctgcacggtcaacagcgtggaggagaagatc
ctggccgccgccaagtacaagctcaacgtggaccagaaggtcatccaggctggcatgttc
gaccagaagtcgtccagccacgagcgccgcgccttcctgcaggccatcctggagcacgag
gagcagaacgaggaggaagatgaggtcccagatgacgagaccctgaaccagatgatcgcc
aggatcgaggacgagtttgagctcttcatgcgcatggacctggaccggaggcgcgaggac
gcccgcaaccccaagcgcaagccgcggctgatggaggaggacgagctgccctcctggatc
ctgaaggacgacgccgaggtggagcggctcacctgcgaggaggaggaggagaagatgttc
ggccgcggctcgcgctcccgccgcgacgtggactacagcgacgcgctgacggagaagcag
tggctgagggccatcgaggacgggaacctggaggagatggaggaggagatccgactgaag
aagcgcaagcggcggcggcacagcgacaaggaggggcggcgcgagagcggcgagaaggcc
aagaagaagcgcggccgcccgcccgccgagaagctctcgcccaacccgcccaagctcacc
aagcagatgaccgccatcgtggacacggtcatcaactacagggacagctccggcagacag
ctcagtgaggtctttgtgcagctgccctcacgcaaggagctccctgaatactatgagctg
ataagaagacccgtggacttcaagaagatcaaggagcgcgtgcggagtcacaagtatagg
agcgtgagtgacctggagaaggacgtcatgctgctctgtctcaacgcccagacattcaac
ttggagggctcacagatccatgaggactccattgtgctccagtccgtgttcaagagcgcc
cggcagaagattgcgaaggaggaggagagcgaagatgacaacgacgacgacgacgacgac
gaggaggagtccgagaccgagtccaagtcagtgagggtgaagatcaagctgagcaaaaga
gaagagcgcagtcacgacaaagggaagaagaggcagagccgcaacaaggccaagcctgtg
gtcagcgatgaggacagcgacgatgacccagacgataaggagcagtcggaaggaagcaag
agtgaggacgagtga
DBGET
integrated database retrieval system
