Sardina pilchardus (sardine): 134089124
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Entry
134089124 CDS
T10667
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04142
Lysosome biogenesis
spil04144
Endocytosis
spil05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134089124 (cltcl1)
04142 Lysosome biogenesis
134089124 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134089124 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134089124 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134089124 (cltcl1)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
134089124 (cltcl1)
Exosome [BR:
spil04147
]
Exosomal proteins
Proteins found in most exosomes
134089124 (cltcl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_Vps41
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
134089124
NCBI-ProteinID:
XP_062399438
LinkDB
All DBs
Position
8:27234853..27277004
Genome browser
AA seq
1683 aa
AA seq
DB search
MSQILPIRFQEHLQLQGVGVSAAHIGFSYLTMESDKFICVREKVGEQNQVVIIDLADPTN
PIRRPITADSAIMNPASKVIALKASRTLQIFNMEMKSKMKAHTMTDDVMFWKWISVNTIS
LVTDTAVFHWSMEGDSQPIKMFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGQFTLEGNPNPSTLFCFSVRGAAGGKLHIIEVGTPATGN
QPFTKKAVDVFFPPEAQTDFPVAMQIGAKYGVIYLITKYGYVHLYDIETGVCIYMNRISA
ETIFVTAAHESTSGIIGVNKKGQVLSVCVEEENIVGYATNVLQNADLALRLAMRSNLPGG
EELFTRKFNTLFSQASYTEAAKVAASAPKGVLRTADTIRRFQSVSAAPGQASPLLQYFGV
LLDQGQLNALEALELCRPVLQQGRKQLLEKWLKAEKLECSEELGDLVKPVDPSLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKMGYTPDWISLLRSVMRAGPDQGLQFAQMLVQDE
EPLANIDQIVDVFMEGSLVQQCTSFLLDALKSNKPEEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRTHIAQLCEKAGLLQRALEHYTDMYDIKRTIVHTHLLNPEWLVNYFGSLSV
EDSVECLRAMLSANLRQNLQLAVQVASKYHEQLGTLTLLELFESFKSYEGLFYFLGSIVN
FSQDPDVHYKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVLGGLLDVDCSEDVMKNLLMAVKGTF
STDDLVAEVEKRNRLKLLLPWLESRLSEGCEEPATHNAVAKIYIDSNNNPERFLQENAFY
DSAVVGRYCEKRDPHLAFVAYERGQCDQELIKVCNENSLFKSESRYLVRRKDPELWAGVL
EEDNPYRRQLIDQVVQTALPETQDPEEVSVSVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADQTRVMEYINRLDNYDAPDIANIAISNQLFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAEQCGEASVWSQLARAQLERELVRDAIDSYIRAEEPSAYMEV
VNAASRNDNWEELVKYLQMARKKSRESYVETELIFALAKTNRLAELEELINGPTNAHIQQ
VGDRSYEEGMYEAAKLLYNNVSNFARLASTLVCLGEFQAAVDSSRKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEELINYYQDRGFFEELIVLLEAALGLERAHMGMFTEL
AILYSKYKPQKMREHLELFWSRVNIPKVLRAAEAAHLWAELVFLYDKYEEYDNAIITMVT
HPTDAWKESAFKEIIAKVANVELYYKSLQFYLDYKPLLLNDLLSVLAPRLDHTRAVSYFT
KVNELQLVKPYLRSVQNQNNKAVNEALNLLLTQEEDYQGLRASIDAYDSFDSVALAQALE
KHELLEFRRIAAYLYRSNSRWQQSVDLCKKDKLYKDATQYAAESEDSELAEALLQWFLEE
GRRECFAACLFTCYPLLHPDLVLELAWRHQLTDFTMPYFIQVMREYLTKVDALAEQVTVD
KLEEAESQRTKEEEVQEPAAMVYGQQLMLTAGPTPIVPQPGYPGYAYTTPGYAAPTYGFN
VQP
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagattctccctatacgatttcaggaacatctgcagctgcagggtgtgggcgtg
agtgcagcccacatcggcttcagctacctgactatggagtcggacaagttcatctgtgtg
cgggagaaagtgggcgagcagaaccaggtggtcatcattgacttggccgaccccaccaat
cccatccgccggccaatcacagccgacagcgccatcatgaaccccgccagcaaggtcatc
gccctgaaagcctcgcgcacactccagatcttcaacatggagatgaagagtaagatgaag
gctcacaccatgacggacgacgtcatgttctggaagtggatctccgtcaacaccatcagt
ctggtcacggacacggccgtcttccattggagcatggagggggactctcagccaatcaaa
atgttcgaccggcacgccagtctggcggggtgtcagatcatcaactacaggacagatgag
cagcagaaatggctgctcctcatagggatctcagcacagcaaaaccgtgtggtgggggcg
atgcagctgtactccgtggacaggaaggtgtcccagcccatcgaggggcacgcggcggcc
ttcggccagttcaccctggaggggaaccccaacccctccaccctcttctgcttctccgtc
aggggcgccgccgggggaaagctacatattatagaggtgggtacgcctgctacaggaaac
cagcccttcactaagaaagccgtggacgtcttctttcctcccgaggcccagacagacttc
cccgtcgccatgcagatcggggctaaatatggcgtcatctacctcatcaccaagtacggc
tacgtgcacctgtacgacatcgagacaggcgtgtgcatctacatgaaccgcatcagcgca
gagaccatcttcgtcaccgccgcccacgagagcacctcaggcatcataggagtcaacaag
aagggacaggtcctgtccgtgtgtgtagaagaggagaacatcgtgggctacgccactaac
gtgctgcagaacgccgacctggcgctgcgtctggccatgaggagcaacctgcccggagga
gaggagctcttcacacgcaagttcaacacgctcttcagccaggccagctacacggaggcc
gccaaggtggcagcgtccgctcctaagggggttctgcgtacggcggacacgatccggcga
ttccagagcgtgtcggcggcccctggccaggcgtctccgctgctgcagtacttcggggtg
ctgctggaccagggccagctcaacgccctggaggccctggagctctgcaggcccgtgctg
cagcagggccgcaagcagctgctggagaagtggctcaaggctgagaagctggagtgctcc
gaggagcttggggatctggtgaagccggttgaccctagcctggcactgagcgtctatctg
cgggccaacgtcccaaataaagtcatccagtgcttcgccgagacgggacagttccagaag
attgtgctctatgcaaagaagatgggttacactcctgattggatctctctgctgaggagt
gtgatgagggcaggtccagatcagggcctacagtttgcccagatgctggtgcaggacgag
gagccactggccaacatcgaccagattgtggacgtgttcatggagggtagtctggtgcag
cagtgtacctcgttcctattggacgccctcaagagcaacaagccagaggaggggcatctg
cagacacgcctcctggagatgaacctcatccacgcccctcaggtcgcagatgcaatcttg
gggaatcagatgttcacacactacgaccgcacacacatcgctcagctgtgtgagaaagca
gggctgctgcagagagccctggaacactacacggacatgtacgacatcaagaggaccatc
gtacacacacacctgctcaacccagagtggctggtgaactactttggctctctgtcggtg
gaggactcggtggagtgtctgcgggccatgctctccgccaacctccggcagaacctgcag
ctggccgtgcaggtggcctccaagtaccacgagcagctgggcacactcacgctactcgag
ctcttcgagtccttcaagagctacgagggcctgttctacttcctgggctccattgtgaac
ttcagtcaggacccggacgtccactacaagtacatccaggccgcgtgcaagaccggccag
atcaaagaggtggagcgcatctgcagagagagcaactgctacgaccctgagcgcgtcaag
aacttcctcaaggaagcaaagctgacagatcagctccctctgatcatagtgtgcgatcgc
tttgactttgtccatgacctggttctgtacctctaccgcaacaacctgcagaagtacatc
gagatctatgtacagaaggtaaaccccagcaggctgccggtggtgttgggggggctgctg
gacgtggactgctctgaggacgtgatgaagaacctgctcatggccgtcaagggcaccttc
agcacagacgacctggtggccgaggtggagaagaggaacagactgaagctcctcctcccc
tggctggagtcccgcctctcggagggctgtgaggagccggctacccacaatgccgtggcc
aagatctacatcgacagcaacaacaaccccgagcgcttcctgcaggagaacgcgttctac
gacagcgccgtagtgggccgctactgtgagaagagagacccccacctggccttcgtggcc
tacgagaggggccagtgtgatcaggaactcatcaaggtgtgcaatgagaactcactcttc
aagagtgagtcgcgttacctggtgcgacggaaggatccggagctgtgggcaggtgttctt
gaggaggacaacccttaccggcggcagctgatcgaccaggtggtccagacagcgcttcct
gagacgcaggacccagaggaggtgtctgtgtcagtgaaggccttcatgacggccgatctg
cccaacgagctcatcgagctgctggagaagatcgtcttggacaactcagtctttagtgag
cacagaaatctgcaaaacctgttgatcctgacggccatcaaggctgaccaaacgcgcgtc
atggagtacatcaaccgcctggacaactacgacgcccctgacatcgccaacatcgccatc
agcaaccagctcttcgaggaagccttcgccatcttcaagaagtttgatgtcaatacttca
gccatacaggtcctgattgagcacatcggtaacctggaccgtgcgtacgagtttgcggag
cagtgcggggaggcgagcgtgtggagtcagctggcgcgggctcagctggagagggagctg
gtgagggacgccatcgactcctacatcagagcagaggagcccagcgcatacatggaggtg
gtcaacgccgccagcaggaacgataactgggaggaactggtgaagtatctgcagatggcg
aggaagaagtctcgtgagtcgtacgttgagactgaactcatctttgctctggctaaaact
aaccgcctggcagagttggaggaactcattaacggtcccaccaacgcccacatacagcag
gttggggaccgtagttatgaggagggcatgtacgaggcggcgaagctgctgtacaataac
gtgtctaacttcgcccggctggcgtccacgctggtgtgcctgggcgagttccaggcggcc
gtggacagcagccgcaaggccaactccacgcgcacctggaaggaggtgtgttttgcatgt
gtggatggcgaggagtttcgactggcccagatctgtgggctgcatattgtcatccatgct
gatgaactggaggagctcattaactactaccaggaccggggcttctttgaggagctgatt
gtgttgctggaagcagctctgggtttggagcgtgctcacatgggcatgttcaccgagctc
gccatcctctactccaaatacaaaccgcagaagatgagggaacacctggagctcttctgg
tcccgagtcaacatccctaaggtgctgcgtgcggcagaggcagcccatctatgggcggag
cttgtgtttctgtacgataagtatgaagagtatgacaatgccatcatcaccatggtaaca
caccctaccgatgcatggaaggagtctgccttcaaagagatcatcgcaaaggttgcaaat
gtggagttgtactacaagtctcttcagttctatctggactataaaccgttgctgctgaat
gacctgctgtctgtgctggctccacggttagaccacaccagagccgtcagttacttcacc
aaggtgaatgaacttcagctggtgaagccgtacctgcgctctgtacaaaaccagaacaac
aaagccgtcaatgaagccctcaacctactgctcacacaggaggaagactaccagggcctg
agggcctccatagatgcctatgatagctttgacagcgtggcgctggctcaggcgctggag
aagcacgagctgctggagttccggcgcatcgccgcctacctgtacaggagcaacagccgc
tggcagcagagcgtggacctctgcaagaaggacaagctctacaaggatgccacgcagtat
gcggcggagtcggaggactcggagctggcggaggcgctgctgcagtggttcctggaggag
ggccggagggagtgcttcgccgcctgcctcttcacctgctacccgctgctccacccagac
ctggtgctggagctggcatggaggcaccagctcaccgacttcaccatgccctacttcata
caggtcatgagggagtacctcaccaaggtggatgcgttagcggagcaggtgacggtggat
aagctagaggaggcagagagccagagaactaaagaggaagaagtgcaggagcctgctgcc
atggtctatggtcaacagctgatgcttactgctggccccactccgatagtccctcagcct
ggttatcctgggtacgcttacaccacgccgggatatgccgcgcccacatacgggttcaat
gtgcagccttaa
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integrated database retrieval system
