Sardina pilchardus (sardine): 134089389
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Entry
134089389 CDS
T10667
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spil02000
]
134089389 (tmc1)
03037 Cilium and associated proteins [BR:
spil03037
]
134089389 (tmc1)
Transporters [BR:
spil02000
]
Other transporters
Pores ion channels [TC:
1
]
134089389 (tmc1)
Cilium and associated proteins [BR:
spil03037
]
Other cilia and associated proteins
Stereociliary proteins
134089389 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
134089389
NCBI-ProteinID:
XP_062399816
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All DBs
Position
8:5588292..5598871
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AA seq
832 aa
AA seq
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MPRDKLVASESDVSIEVNAGKNLEQSEKEQRRRKAKRRRDKEEEKTGIEEDGEEVDKEIQ
RRRKHGRNGRARELKEEKEEENRNHRRQRPSKTEEEITTSRKKAKKKPDDEAQKTDKGKK
KRKKVETSSESSEVEELVEEEEEEEEEEDAVVVVGALTPEELEKLKEAVDERKKLIGTLR
GKPWPMMKKLQTLKESQEFVEKYEGALGIGRGRKLYAYKVMMQKKWMKFLRDFENFKTAC
IPWEMKIKDIESHFGSSVASYFIFLRWMYGINMILFGLMFGLVMVPEALMGRPYGSIPRK
TVPRADEASAMDFAVLWDFGGYAKYSVLFYGYYNHQRTIGWLKFRMPLSYFLVGVGMVAY
SYMVVIRKMARNANEQGGGDDTSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAIV
EEQENRKDENIHLTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALAGLENYGWWERN
EVNMVMSLLGMFCPMLFDVISSLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINL
KRKEEEGIIANMTLWHASLYNGTLGENATTPVITVDPADVPRGPCWETMVGQEFVRLIIS
DTMTTYVTLLIGDFLRALIVRFLNYCWCWDLEYGFPSYSEFDVSGNVLGLIFNQGMIWMG
AFYAPCLPALNVLRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLP
AIYTIVSIPPSFDCGPFSGKSRMFDVIQETLENDFPAWFGKVFSYVSNPGLVLPFLLLMI
LAIYYLHSISKTYKQSNLDLKKKLQTQNDENKKKNKRAALKAATDLEEVTED
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgacaagctcgtcgcctccgagagtgatgtcagcattgaggtgaatgcaggt
aagaatcttgagcaatctgagaaagagcagcggagaaggaaggccaagagacggagagat
aaagaggaagagaagacgggaatagaggaagacggcgaagaggtggacaaagagatccaa
aggcggagaaagcatgggaggaatggaagagcgagggagcttaaggaagagaaagaggag
gagaacaggaatcaccggagacaaagaccgtctaaaacagaggaggaaataacgaccagt
cggaagaaagccaagaagaaaccggacgatgaagcacagaagacagacaaagggaagaaa
aaaagaaagaaagtggaaaccagttctgaatcctctgaggtggaggaactagttgaggaa
gaggaggaggaggaagaggaggaggacgcggtggtggtggtgggggcgctgactcctgag
gagctggagaagctgaaggaggcggtggacgagaggaagaagctcatcggcacgctcaga
gggaagccctggcccatgatgaagaagctccaaaccctcaaggaatctcaggagtttgtg
gagaaatatgagggtgctcttgggataggaaggggcagaaagctgtatgcctacaaagtc
atgatgcaaaagaaatggatgaagttcctacgtgactttgagaacttcaagacagcatgc
atcccatgggaaatgaagatcaaagacatagaaagtcattttgggtcctctgttgcaagc
tacttcatcttcctcagatggatgtatgggattaacatgattctctttggactcatgttc
ggcctggtcatggttccagaggcgctgatggggcggccgtatgggagcattcccaggaag
actgttcccagagcggacgaagcaagtgccatggactttgccgtcttgtgggattttggg
gggtatgccaagtactctgtcctcttctacggctactacaaccaccagcggactattggc
tggctgaagtttcgcatgcctctctcctacttcctggtcggggtcggcatggtggcctac
agctacatggtggtcattcggaagatggcccgcaacgccaatgagcaagggggcggagat
gacaccagtttcaacttcagctggaagatgttcaccagctgggactacctcatcgggaac
cctgagaccgcagacaacaagtttgcctccatcaccaccagcttcaaggaggccattgtg
gaggaacaggagaacaggaaggatgagaacatccaccttacccgcttcctcagggtcctg
gccaacttcctggtgctctgctgcttggcaggaagtggatatctgatctactttgtcgtc
aggaggtctcagaagtttgccctggcggggctggagaactacggctggtgggagagaaat
gaagtgaacatggtgatgtctctgctggggatgttctgtcccatgctgttcgacgtgatc
agctccctggagaactaccacccccgcgtcgccctccagtggcagctgggccgcatcttc
gccctgttcctgggcaacctctacaccttcatcatcgccctcatggacgagatcaacctc
aaaaggaaagaggaggagggtataatcgccaacatgacgctgtggcatgccagcctgtac
aacggcaccctgggagagaacgccaccactcctgtcatcactgtggacccagcggatgtc
cccagagggccctgttgggaaactatggtgggacaggagtttgtccgcctcatcatttct
gacaccatgacgacatacgtgaccctgctgatcggggatttcctcagggcattgatcgtt
cgcttcctcaactactgctggtgctgggacctggagtacggctttccctcctattcagag
tttgatgtcagcggaaatgtcctggggttaatctttaatcagggaatgatctggatgggg
gcattttacgcgccgtgtctgccagcgctgaacgtgctgcgtctgcacgtgtccatgtac
ctgcagtgctgggcggtgatgtgctgcaacgtgccccaggagcgcgtcttcaaggcgtcc
ggctccaacaacttctacatggccatgctgctggtcattctgttcctctccaccctgccc
gccatctacaccatcgtctccatccccccctccttcgactgcggacccttcagtgggaaa
agtcggatgtttgacgtaatccaggagaccctggagaatgattttccagcatggtttggg
aaggtgttcagctatgtgtccaaccctggcctagtcctgccattccttctgctgatgata
ttagcaatatactatcttcactccatatcgaagacatacaaacagtccaaccttgatctt
aaaaagaaacttcaaacacaaaatgatgaaaataaaaagaagaacaagagggctgctctt
aaggcagcgactgacctggaggaggtaacagaagactga
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