Sardina pilchardus (sardine): 134089433
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Entry
134089433 CDS
T10667
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134089433
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Meiosis-specific proteins
Others
134089433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
134089433
NCBI-ProteinID:
XP_062399860
LinkDB
All DBs
Position
8:complement(14124539..14139177)
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AA seq
1718 aa
AA seq
DB search
MSAPHTLSEAEALDIVPSSNPASQACPEAEEIFWQVTHKKSETDVSLVDDFTKAAGSDMS
VGHEELLLEELLASSPLPQFKKHMPTLRVKLSRLKAVLVLDPLQTPMGGSLSEDMIFGRC
VPYDISSCGDTNSSQMRSSDTEEFSKVSPRDEESLMLLEVESCSMHKESFNTSLAHLSSI
LQVREEPVGDQVSSVDMLKKVTPADLQEMHHFRTLDAPSNSLDTLNPLDPKSPVPLRLYP
ELELDVPFFPVPGPQRPELRLPNSHLQPEPLPPIYRHWLVSDEEREESEQVLWSSEKQHN
AIGGFLLAEPSSLERFEKNQPLTDALKLLGISAPKQEVGLTGLPEQLQSLVKGCVEFPED
MTAEPLSIEKRDLVKPEDFTVLSGSEIDAKPTQPPATSVQGDLKRQAVPSQQEDGAAVKK
LIMERMAWPAEISTPAWEHAPSIKTQERVANFAPASHPPKELPSRTSEHKPVTHSDLLSS
FMMLRQQQRVLESSEKTSSTLTGAAGDKNVQVKRFTNQRPTEQRPGEGSRPLVTGTASSS
GPPERGSSSAVQGTHSITASTGQASRASTPVGQTDRASTPIASDSRDGKAEAQVPAERDN
KNCRVIPVQATESQLLALRAVQAVGEPCFSRALELGLSATGGCRDFSSLDTERSLFLLKQ
QQKQLSVMPGLEQLYVEVALLHTLATVKELVLQCGVGRACDYLAKAKTAHETDALEHLHK
KYLIWQFHSQKNLEPDPKLLELQDVMRSWLQSVATQQPLSKVLLLISSNSDSVRTLLIGS
LSEISGEGVVDAVVSEENCWQVDGKKVLNSLRRSSWVVVCSLHLGPDFPWHAFSVVVEYD
SLGHTPWPSICSERSISYVTFATVTPASDTTAPPSPSTDLERIPFTLFVTEGLLDRSSLL
QTLESVYNLTMIERSQSPSLKMLGGAHQYAVITVDESTAVLLQEVDELATERASERVVMR
LIALSLQYSSCWFLLHLPSARYSCVSVQILTNLALIYSAVVLFGLKSEEFSVKVLVVSEE
EDIARWIYQIAHHSMMSSEGDPQRYLDREWLSVLPSQDEDSLMRFPSVNPLVAQIMLKRA
PSLRWLLGASLTELQQLLPEVPHKVIKLFTDTTGLYPLGSPAPQPNPVPDPEPQPQPQLP
QMGRTSAQDPWASAVQPQASHYSHSPQEEALFHKTSSAGQSDARFHKKEEWGRAGNSTAG
LSDAFFQKTSSAGQNSALFHKTSSAGSSAGQNDVLFHKTSSAGQNDVLFHKTSSAASSAG
QSDALFHKTSSAGQSDALFHKKEEWRHTGNSTAGQSHAFSHSTQDWGQEGNSCTGQNDAI
FHRKKDWGHSGAGQTNAAFHRNEDWEQTRNPTAGQTDAYFHRNEDWGQARSSSEVQTGAY
FHNKEDWEQKEAGQADAFFHRTQDWGQTGNSTARQSDVFSHKTQHWGKTGNSDQTDAFFQ
WKNDWGQTMNASAGQRDDVFRKTDDWEQPGYSDASQADPFFQRKGDFGQRETAKTEGVFR
RRDDWGITENSCAVPSNDAFRIEVDWGQTESPFSPTPAATATPPMPQGFQRKHWHMGVKE
DKFIPRTNQARDWTPRISPKDTAYYSIRETQTTSPFERSFSSGPQPSPYFQSQMPAAIPC
GPAHSIASSPVSRWTGRLISEAYRFTPGGGSSRPAGMRDEQDRKRRAELSPASGYPDTKK
AKLLYEKVPGRSDGQTRLRVLGRLIFTSQRTTASPSLE
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcctcacacgctgagtgaagcggaggctttggacatagtccccagctccaat
cctgcttcccaggcctgtcctgaggcagaggagatcttttggcaggtcacccacaaaaag
agcgagactgatgtatctttagtagatgacttcaccaaagccgcaggaagtgacatgagt
gtgggccacgaagagctcctgctggaggaattgctggcaagctctcccctgccccagttc
aagaaacacatgccgactttacgagtcaaactgagccgattgaaagctgtgttggtgttg
gacccactacaaactccaatgggaggttccctgtctgaggatatgatttttgggagatgt
gtgccctatgatatcagttcatgtggtgatacaaacagctctcagatgaggtcaagtgat
acagaggagtttagcaaagtgtcacctcgggatgaagagtccttaatgttgcttgaagtg
gaatcctgcagcatgcacaaagaatccttcaacacatctctagctcacctttctagcatt
ctacaagtaagagaagaacctgtgggagaccaggtgtcttcagtggatatgcttaaaaaa
gtgaccccagcagatctacaggaaatgcatcattttagaacccttgacgctcctagtaac
agcttggacactctcaacccattagacccaaagagcccagttcctcttaggctgtaccca
gagctggagctcgatgtacccttcttcccagttcctggccctcagaggcccgagctgcgg
ttgccgaacagtcatcttcaaccggagcctttgccccccatctacagacattggctagtg
tcagatgaagaacgagaggagtcagagcaggttctgtggtcctcagagaaacagcataac
gccataggaggttttcttctggctgagccttctagtcttgaacgttttgagaagaaccaa
ccactgactgatgccttaaaactcttgggcatctcagcaccaaaacaggaggttggactc
actggattgcctgaacagctccagtctctggttaaaggctgcgttgaatttccagaggat
atgacagctgagccactcagtattgagaaaagggatttagttaagccagaggacttcaca
gtgctgtcaggctcagagattgatgcaaaacccacccagcctcccgccacctctgtccag
ggagacctgaagcggcaagcggtaccctctcagcaggaggatggggccgccgtgaagaag
ctcatcatggagaggatggcttggcccgctgagatctcaacgcctgcctgggagcatgcc
ccctcaatcaagacacaggagagagtggccaacttcgctccggcgagtcaccctccaaag
gagcttcccagcagaacttcagagcacaagccagtgacgcactctgacctcttgagctcg
ttcatgatgctcagacaacagcagcgtgtgctggagtcttcggagaagaccagctccact
ctgacaggtgcagcaggagacaaaaatgtacaggtaaagaggttcaccaaccagagaccc
acggagcagaggccaggtgagggcagtcggcctctggtgacggggacggcgtcctcctca
ggccctccagagagaggcagctcctccgccgtccagggaacccacagtatcacagcctct
acaggtcaggctagcagagcaagcactcctgttggtcagaccgacagagccagtactccc
atcgcgtcagatagcagagatggcaaggctgaggctcaggtacccgctgagagggacaat
aaaaactgcagggtcatacctgttcaggccacagagagccagctgctggccctgcgggcg
gtgcaggcggtgggagagccgtgcttctccagggcgctggagctgggcctgagtgccacc
ggcggctgcagggacttcagcagcctggacacggaacgcagcctcttcctgctcaaacag
cagcagaagcagctctccgtcatgccaggtctggagcagctgtatgtggaggtggctttg
ctgcacaccctcgccactgtgaaggagctggtgcttcagtgcggagtcggcagagcttgt
gattacctggctaaggccaaaaccgcccacgagacagatgccttggagcacctgcacaaa
aagtacctgatctggcagttccacagccagaagaacttggagccggaccccaaactcctg
gagctccaggatgtgatgagatcatggctgcagtctgttgccacccagcagcccctctca
aaagtgctcttactgatttctagcaactctgactctgtgaggacgctgctaatcggaagt
cttagtgagatatcaggagagggtgtggtggatgcagttgtgtctgaagaaaactgctgg
caggtagatggcaagaaggtgttgaacagcctgaggcgcagcagctgggtggtggtgtgc
agcctgcacctgggcccggacttcccctggcacgccttctccgtggtggtggagtacgac
agcctgggccacacgccctggccctccatctgcagcgagaggagcatcagctacgtgacc
ttcgccactgtcaccccagcctcggacacgacagccccaccatctccatcaactgatctg
gagagaatccctttcacgctgtttgtgactgagggtctgctggatcgctcatctttactg
cagacgctggagtccgtgtataacctgaccatgatagaaaggagccagtctccctcgctg
aagatgctcgggggagctcatcaatatgctgtgattacagtcgacgagagcacggcggtg
ctcctgcaggaggtggacgagctggcgacggagcgagcgagtgagcgggtggtgatgcgt
ctgatcgctctctccctgcaatacagcagctgttggttcctcctgcatctccccagcgct
cgctactcatgcgtctctgtgcaaatcttgaccaacttggcgttaatctactcagctgtg
gtactctttggattgaagtctgaagaattcagcgtcaaggttttggttgtatcagaggag
gaggatattgccagatggatttaccagatagcccatcacagcatgatgtcatcagagggc
gaccctcagcgttatctggacagagagtggttatcggtgctgccctcacaggatgaggac
agtctgatgcgcttccccagtgtgaatccgctggtggcccagatcatgctgaagagggcc
ccctccctgcgctggctcctgggagcctccctcacagagctgcagcagctgctgccggag
gtccctcacaaagttatcaagctcttcacagacaccacaggtctgtatcctctgggctcc
cctgctccccagcctaaccccgtgcctgaccccgagccccagccccagccccagctccct
cagatggggcggaccagcgcacaggacccctgggcttcagctgtccaaccacaggcgtcc
cactacagccacagtccccaggaagaagccctcttccacaagacttccagtgctggtcag
agcgatgcccgcttccataagaaagaggaatgggggcgagcagggaattctacagctggt
ctgagcgatgctttcttccagaagacctccagtgctggtcagaacagtgccctcttccat
aagacttccagtgctggttccagtgctggtcagaacgatgtcctcttccacaagacttcc
agtgctggtcagaacgatgtcctcttccacaagacttccagtgctgcttccagtgctggt
cagagcgatgccctcttccacaagacttccagtgctggtcagagcgatgccctcttccat
aagaaagaggaatggagacacacagggaattctacagctggccagagtcatgccttctcc
cacagcacacaggattgggggcaagaagggaattcctgtactggtcagaatgatgccatc
ttccaccggaaaaaagactggggacactcaggagcaggtcagaccaatgctgccttccac
aggaatgaggattgggagcaaacaaggaatcccactgctggtcagactgatgcctatttc
cacaggaacgaggattggggacaagcaaggagttcatcagaagttcagactggtgcctat
ttccacaacaaagaggattgggagcaaaaagaagccggtcaggccgatgccttttttcac
cggacacaggattgggggcagacagggaattccactgcacgacagagtgatgtcttttcc
cacaagacacagcattgggggaaaactgggaattccgatcagactgatgcctttttccag
tggaaaaatgattgggggcagacaatgaatgccagcgctggtcaaagggatgatgtcttt
cgcaagacagatgattgggagcaaccagggtattccgatgcaagtcaggctgatccattt
ttccaaaggaaaggcgattttgggcaaagagaaacagctaagactgaaggcgttttccgc
aggagagacgattgggggataacagagaattcctgtgctgttccgagcaatgatgccttc
cgtattgaagtcgattggggccaaacagagagccctttcagtcccactcctgcagcaaca
gcaacacctccaatgccacagggcttccagcgtaagcactggcacatgggggtcaaagag
gacaagttcatcccacgcacaaaccaagcacgcgattggacaccgaggatttcaccaaag
gacactgcgtattattcgataagggaaacacaaaccacgagcccgttcgagaggagcttt
tccagtgggccccaaccttcgccgtacttccagagtcagatgcctgctgccataccctgc
ggcccggcccacagcatcgcctcctccccggtgtcgcggtggacgggccgactgatctcc
gaggcctaccgcttcacaccgggcggcggcagcagcaggccagcgggcatgagggatgag
caggacaggaagaggagagcggagctatcgccagcctcaggatacccagacaccaagaaa
gcaaagctgttatatgagaaggttcctggcagaagtgatggacagacaagactgagagtg
ctgggaaggcttatcttcacgagccagcgcaccacagccagcccctcgctggaatga
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integrated database retrieval system
