KEGG   Sardina pilchardus (sardine): 134089562
Entry
134089562         CDS       T10667                                 
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03022  Basal transcription factors
spil03420  Nucleotide excision repair
spil04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    134089562 (cdk7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    134089562 (cdk7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    134089562 (cdk7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:spil01001]
    134089562 (cdk7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spil03021]
    134089562 (cdk7)
   03019 Messenger RNA biogenesis [BR:spil03019]
    134089562 (cdk7)
   03400 DNA repair and recombination proteins [BR:spil03400]
    134089562 (cdk7)
Enzymes [BR:spil01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     134089562 (cdk7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     134089562 (cdk7)
Protein kinases [BR:spil01001]
 Serine/threonine kinases: CMGC group
  CDK family
   134089562 (cdk7)
Transcription machinery [BR:spil03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     134089562 (cdk7)
Messenger RNA biogenesis [BR:spil03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     134089562 (cdk7)
DNA repair and recombination proteins [BR:spil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     134089562 (cdk7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Seadorna_VP7 ABC1 Kinase-like Haspin_kinase APH
Other DBs
NCBI-GeneID: 134089562
NCBI-ProteinID: XP_062400000
LinkDB
Position
8:complement(14948926..14955025)
AA seq 345 aa
MAMDVKSRSKRYEKLAFLGEGQFATVYKARDKTTNAIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHRHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRIYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRLPFLAGDSDLDQLTKIFEALGTPTEETWPGM
TNLPDYVSFKLFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRLTATQALKTRYFSNRPG
PTPGPQLPRPNCSTEVLKEKENLVLGTKRKRDAISEGTVSKKLVF
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcgatggacgtgaaatcaagatccaagcgttatgaaaaactggcatttcttggagaa
ggacagtttgccacagtctacaaagccagagataaaacaacaaatgccatagtggcgatc
aaaaaaatcaaagttgggcacagaacagaagcaaaagatggtattaaccggacagccctt
cgagagattaagctgttacaggaattgagtcacccaaacattataggtctattagatgcg
tttgggcacaagtctaacatcagtttggtgtttgattacatggaaacagatctggaggtg
atcataaaagacactagcctcgtattaaccccagccaacattaaagcctacatactgatg
acacttcagggattggaatacatgcaccggcactggatcttacacagggatttaaagcca
aataacttgttgctagatgaaaatggggtcctgaaacttgctgactttggattggcaaaa
gcttttggaagtccaaacaggatctacacacatcaagttgttacacggtggtaccgtgct
cctgagcttctctttggcgccaggatgtatggcgttggtgtggatatgtgggcagtgggc
tgtatacttgctgagttgctcctcaggttaccattcttagcaggagactcagacctagat
cagctgaccaaaatatttgaagctttgggaacaccaacagaagaaacatggcctgggatg
accaacctccctgactacgtgtcatttaagttattccctggaactcctcttgagcatata
ttcagcgcagctggggacgaccttctggagctgctgcagggattattcacctttaacccc
tctacccgactcacagcgacacaggcccttaagacgaggtatttcagcaacaggccagga
ccaaccccggggcctcagcttccacgaccaaattgctcaacagaagttctaaaagaaaag
gagaatctcgttttagggaccaaacgaaagcgtgatgccatatcggaggggactgtgtcc
aagaaattggttttttga

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