Sardina pilchardus (sardine): 134089578
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Entry
134089578 CDS
T10667
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04010
MAPK signaling pathway
spil04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134089578 (cacna1ba)
04020 Calcium signaling pathway
134089578 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134089578 (cacna1ba)
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
134089578 (cacna1ba)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
134089578
NCBI-ProteinID:
XP_062400013
LinkDB
All DBs
Position
8:17982907..18077586
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AA seq
2400 aa
AA seq
DB search
MARFEDDLRYGGGSPASSGRGASRQGGPPAGPRVYKQSMAQRARTMAIYNPIPVKQSCLT
VNRSLFIFSEDNIIRKYAKKITECPFEYMILATIIANCIVLALEQHLPASDKTPMSERLD
DTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDLRTL
RAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGKFHR
TCFRIDTGEQAADFPCGTELPARICGNGTVCQEYWLGPNFGITNFDNILFAILTVFQCIT
MEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEF
LKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKRKPTSNSVLKRVKK
SKNDLINAEEGEDHFTDISSVACVCAFVPTAPQGSPFARASVKSSKNESSSYFRRKEKRA
RFFIRRMVKSQGFYWTVLCLVGLNTLCVAIVHYDQPDWLTYALYLAEFVFLGLFLTEMSL
KMYGLGPRTYFHSSFNCFDFAVIIGSIFEVVWAAVKPGASSFGISVLRALRLLRIFKVTK
YWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFP
AAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIILTLFGNYTLLNVFLAIAVD
NLANAQELTKDEEEQEEAISKKLALQKAKEVKEVSPMSAANISITAEQQRSQKLMSVWEQ
RTTQMRRNNIRNSSEALYSELDPEERQRMSSALHIRPDMKTHLDRPLVVEHRDGPVGGGA
VPHNHHHHHHNHHWDKAQGEGDGAGGVECGGPRKHHRHRERREDANGENGETGGREGGRE
GGRHHVHHSRSKDHEGSRCREGKGDRSRSREGGRRHHHQRSVDEGGGGGEREHHHHHHRQ
QSAEGNGVVSSGGKSLRRSRHRDGSRSGNRDGDRCSRGENGANGERNRHRPRSGKSQVTA
DGEEGRESGERAGRTHRHRHTDVDGDSLGDLRQQPTPGSQWGGDRAEDSDNQRNVKQTSQ
PGGHIPVTITSPPGETTLIPMNSIDSETMPMTEEKRNLDELNLINTRPILPYSSMFVFSQ
TNPVRRLCHYMVSLRYFEMCILVVIAMSSIALAAEDPVQVNATRNNVLKYLDYVFTGVFT
FEMVIKMVDLGLILHPGSYFRDLWNILDFIVVSGALVAFAFTGTKGKDISTIKSLRVLRV
LRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFFCTDES
KGLEKDCRGQFLDYDKDEVSAQPREWRKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSV
DATFEDQGPSPGYRIEVAFFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKN
ERACIDFAINAKPLTRYMPQNQHSFQYKMWKFVVSPPFEYSIMIMIAVNTVVLMMKFHGA
PDSYEAMLKYLNIVFTALFSLECVLKIIAFGPLNYLKDPWNVFDFVTVLGSITDILVTEI
NTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAI
IGMQVFGNIELNEDTAINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRTCDVRSG
VSGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVW
AEYDPAACGRIKYRDMYEMLLHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTST
LMALIRTALEIKLASGMVAQRLSDAELKKELATVWPNLSQKTMDLLVTPHKPNELTVGKV
YAALMIFDYYKQTRAQRQQQQKEQAAAAASGGTTSKVGGALVKPILPPTHMQDVDVKSVD
CPADAQAHTRPSSTALNNGRTHQDGNIRGSSSWASEKPREVPRPIKRIIHRGPSDDTADP
ATAQESVELRKMEHSGNSGASSCLESQGRAVSMPKLSAEMQRSHSRHSPGTLLAPIPDSS
PMKRSASTVAPQRPQEVNLRDYTLEKPGQERPHHHHHHHRCHHRRERDKKQRSLDRSPSG
QPPNNLGEPPGDPSTRERTHDRGRSHERKHHSSSGDKQRYYSCDRYSSREHCAAAATATT
KSTTASCATSPNEAHEPGLNKQGSGWVKGSPVMSTSGASTPSRGRRQLPQTPLTPRPGVA
YRTANSSPVFFVVGAQAGASASPCRLSRGQSEHNALLHSGRDSPSSTPFVRISSEPFLYP
AELYGAAAPAAAAALPPLPPLPPPPQQQQQPPPCSFRDEVAAFQELASGTRAIAVVGHPP
PLPRSPGAHHTGPLLPPLPPQLFRGVPNGYHLNMGVPGGGQIPEGRVPRYYLEAGEDEWC
NT seq
7203 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgaagacgatctacgatatggaggtggcagtccagcgagtagtggaagg
ggggcaagccggcagggaggccccccagccggcccgagggtgtacaagcagtcaatggcc
caaagagccaggacaatggccatatataacccaatccctgtcaaacaaagctgtctcact
gtcaaccggtcccttttcatcttcagcgaagataacatcatacggaaatatgcaaagaaa
ataaccgaatgtccatttgagtacatgattctagccaccatcatcgccaactgcattgtc
ctggccctcgagcagcatttaccggcgagtgacaagacccccatgtcggagcgtctggat
gacaccgaaccatactttattggaatattttgttttgaggctggcattaagatcatcgct
ctcgggtttgcatttcacaaaggctcctacctccgaaacggatggaatgtaatggatttt
gttgtcgtgctaacagggattcttgccactgtgggagcagactttgatttgcggacactc
agagcagtgcgcgtgcttcgaccgctcaagcttgtgtctggaattccaagccttcaggtg
gttctgaaatctatcatgaaagccatggtgcctcttctccagatcgggcttcttctgttc
ttcgccatcctcatgttcgccatcatcggtctggacttctacatggggaagttccaccgc
acatgcttcaggatcgatacgggggagcaagcagcagatttcccctgtggaaccgaactt
cctgctcggatctgtgggaatggcaccgtgtgccaggaatactggctcggtcccaacttt
ggcatcaccaactttgacaacatcctgttcgccattctcaccgtcttccagtgcatcacc
atggagggttgggtggacatcttatataatgccaatgacgcctcagggaacacctggaac
tggctctacttcatccccctcatcatcatcggctccttcttcatgctcaacctggttctg
ggcgtgctgtctggggagtttgccaaggagcgtgagcgggtggagaagcggcaggagttc
ctgaagctgcgccggcagcagcagatcgagcgcgagctcaccggctacctggagtggatt
tgcaaggcagaggaagtcatgctggccgaagaggacaaaaatgcagaggagaaatctcta
gatggagcctggtacaagagaaagcccaccagcaactcagtcctgaaaagagtcaagaag
agcaagaatgacctgatcaatgctgaagaaggggaggaccacttcactgacatctcctca
gttgcgtgcgtgtgtgcctttgtccccactgcaccccaaggatccccgttcgcccgggcc
agcgtgaagagcagcaagaacgagagctcgtcttatttccgtcggaaagagaagagggcc
cgcttcttcatccgacgcatggtcaagtcccagggcttctactggacggtcctgtgtctg
gtcgggctcaacacactgtgtgtggccatagtgcactacgaccagccagactggctcacc
tacgctttatatttggcagagtttgtgttcctgggcctgtttctgacagagatgagcctc
aagatgtatggactggggcccagaacctattttcattcctcgtttaactgctttgatttt
gcggttattatcggtagcatttttgaggtggtctgggccgctgtgaaacccggagcctcg
tcgtttggcatcagcgttcttcgagctctccgcctgctcaggatattcaaggttaccaag
tactggaactctttgcggaatctggtggtgtccctgctgaactccatgaagtccatcatc
agtctgctcttcctcctcttcctcttcattgtggtcttcgctctcctgggcatgcagctc
ttcggtggacagtttaattttgaagaagagactcccacaaccaattttgatacatttcca
gcagccattcttactgtgttccagattttgacaggagaggactggaatgcagtgatgtat
catgggatagagtcccagggcggggtccgtcgggggatgttttcctccgtgtatttcatc
atcctgactctctttgggaactatacccttctcaatgtcttcttggccattgcagttgac
aaccttgcaaatgcacaagagctcacaaaggacgaggaggagcaggaggaggccatcagt
aagaagctggccctgcagaaggccaaagaggtcaaagaggtcagccccatgtcagcggcc
aacatctccatcacagcggagcagcagaggtcccagaagctgatgtccgtgtgggagcag
cgcaccacgcagatgcggcgcaacaacatccgcaacagcagcgaggcgctctacagcgag
ctggaccccgaggagcgccagcgcatgtcctccgccctgcacatccggcccgacatgaag
acccacctggaccgccccctggtggtggagcaccgcgacggccccgtcggaggcggcgcg
gtgccccacaaccaccaccaccaccaccacaaccaccactgggacaaggctcagggtgag
ggggacggggctggcggggtggaatgtggggggccgcggaagcatcaccggcaccgggag
aggcgcgaggacgccaacggggagaacggggagacgggtgggagggagggaggcagggag
ggcgggcggcatcacgtccaccacagccgcagcaaggaccacgagggctcgcgctgccgg
gaggggaaaggcgaccgcagccggagccgagagggggggcgccgccaccaccaccagagg
tctgtagacgagggcggaggaggaggagagagggagcaccaccaccaccaccaccggcag
cagtccgccgagggcaacggggtggtcagcagcgggggcaagagcttacggcggtcacgg
cacagggacggctcgcgctcggggaaccgcgacggcgaccgctgctcgcggggagagaac
ggagccaacggggagaggaacaggcaccggccccgcagcggcaagtcacaggtcaccgcc
gacggagaggagggcagagagagtggcgagagggcgggcaggacccacaggcacaggcac
acagatgtggatggcgactctttgggggatctccgacagcagcccacgccaggctcacag
tggggaggtgacagagccgaggactccgacaaccagaggaacgtgaagcagacgagccag
ccgggaggccacatccctgtcaccatcacctcaccgccaggggagaccaccctcatacca
atgaacagtatagacagtgagaccatgccaatgacggaggagaagaggaacctggacgaa
ctgaacctgatcaacactcgccccatcctgccctacagctccatgtttgtgttcagccag
accaatccagtacggcgactgtgccattacatggtgagcctgcgctactttgagatgtgc
atcctggttgttatcgccatgagtagtatagccctcgctgctgaagaccctgtccaggtc
aatgccacccgcaacaatgtgctaaagtatttggattatgtctttacgggagtttttaca
tttgagatggtgattaagatggtcgatcttggattgatacttcaccccggctcttacttc
agggatctatggaacattctggacttcattgtggtcagtggagcgctggttgcatttgcc
ttcacaggcactaaaggaaaggatatcagcaccattaaatcactgagggtgttgcgagtg
ttacggcctctcaaaaccatcaagcgtctgccgaagcttaaggccgtgttcgactgtgtg
gtgaactccctcaagaacgtgctaaacattctcatcgtctacatcctcttcatgttcatc
tttgccgtcatcgccgtgcaactcttcaagggcaagttcttcttctgcacggacgagtct
aaaggcctggagaaggactgcaggggccagtttttggactacgataaggacgaggtctcg
gcccagcctcgggagtggaggaaatacgagtttcactatgacaacgtcctctgggctttc
ctcacgctcttcacggtctctactggggagggctggcccacggtcttgaagcactcggtg
gatgccacatttgaggaccagggccctagtccaggctaccggattgaggtggccttcttt
tatgtggtctactttgttgtcttcccctttttcttcgtcaacatctttgtggccttgatc
atcatcaccttccaggaacagggtgacaaagctatgtcagagtgcagtttggagaaaaat
gagagggcttgtattgactttgccatcaatgcaaaaccgctgacacgctacatgccccag
aaccagcattcctttcagtataagatgtggaagtttgtggtttctccgcccttcgagtac
tccatcatgatcatgatcgcagtcaacactgtggtcctcatgatgaagtttcatggagcg
ccagactcttacgaggccatgctcaagtacttgaacatcgtcttcactgccctcttctca
ctcgaatgtgtcctcaagatcattgcctttggtcctttgaattacctgaaggatccctgg
aatgtctttgactttgtgaccgtactggggagcatcacagacatcctggtcaccgagatc
aatactacggaccgtctgttgaacctgagcttcctgagactcttccgggcggcgcgtctc
attaagttactccggcagggctacaccatccgcatcctcctctggacctttgtgcagtcc
tttaaggcgctgccttatgtttgccttctgatcgccatgctgttcttcatctatgccatc
attggaatgcaggtttttgggaacattgaactcaatgaggacactgctatcaatcaccat
aacaactttcgcaccttcctgcaggctctgatgctcctcttcaggagtgccacgggagaa
gcctggcatgaaatcatgctgtcctgtctgagtcaccgcacctgtgatgtgaggtcgggt
gtgtccggcaaggagtgcggcagcgacttcgcctacttctacttcgtgtccttcatcttt
ctctgttctttcttgatgctgaatttatttgtagcagtcatcatggataactttgagtac
ctcaccagagattcctccatcctggggccccatcaccttgatgagttcattcgggtttgg
gctgagtacgacccggctgcctgcggccgtatcaagtaccgcgatatgtatgagatgctg
ctccacatgtccccacccttaggtttggggaagaaatgcccaccgagaatcgcctacaag
cgtctggtgaagatgaacatgcccatagcggacgacaacaccgtccacttcacctccacc
ctcatggcactgatacgcactgccctggagatcaaactggcgtcaggtatggtcgcccag
cggctaagtgacgccgagctgaagaaggagctggcaacagtatggcctaacctgtcacag
aaaaccatggacctgctggtgactccacacaaacccaacgaactgacggtggggaaggtg
tacgccgccttaatgatctttgactactacaagcagacccgggctcagcggcagcagcag
cagaaggaacaggctgccgctgccgcctctggtggcaccaccagcaaggtgggcggcgca
ctggtcaaacccatactgccccccactcacatgcaggacgtggatgtgaagagcgtggac
tgtcccgccgacgcccaggcacacaccaggcccagctccacggcgctcaacaacggccgc
acgcaccaagatggcaacattcgagggtcctcttcatgggcctcagagaagccacgagag
gtcccgaggccgattaaacgaatcatccacaggggaccgtcagacgatactgcagatcca
gccactgcccaggagtcagtagagttgagaaagatggaacacagtggcaacagcggagcc
tcgtcttgtctggagagccaggggagggctgtgtccatgccaaaactcagcgccgagatg
cagaggagccactccagacactctccagggacgctgcttgctccaattcctgactccagt
cccatgaagcgctcggcgtccaccgttgcaccacagcgcccccaggaggtcaacctgcga
gactacaccctggagaagcccggtcaggagcggcctcatcaccatcaccaccaccaccgc
tgccaccaccgcagggaacgcgacaagaagcagaggtcactggaccgctcccccagtgga
cagcctcccaataatctgggcgagcctccaggggacccctcgacccgcgagcggacgcac
gaccggggccgctcgcacgagaggaagcaccattcgtcctccggcgacaagcagcgctac
tactcctgcgaccgctacagcagcagggagcactgcgccgccgccgccaccgccaccacc
aagtccaccactgccagctgtgccacctcccccaacgaggcccatgagcccggcctcaac
aagcagggcagtggttgggttaaggggagcccggtgatgtccacctcgggggctagcacc
cccagtcgcggccgcaggcagctgccccagactcccctgaccccccgtcccggcgtggcc
tacaggactgccaactcctcccccgtgttctttgtggtgggcgctcaggccggggcgtcc
gccagcccctgccggctgagccgcgggcagtccgagcacaacgccctcctgcacagcggc
cgcgactcgccgtcgtccaccccctttgtgcgcatcagctcggagccgttcctgtacccg
gccgagctgtacggcgcggcggcaccggcagcagcagcagcacttcctcctcttcctcct
cttcctcctcctcctcagcagcagcagcagccgccgccctgcagcttccgggacgaggtg
gccgctttccaggagttggcgtcgggcacgcgcgccatcgccgtggtgggacacccccct
ccgctgccccggtcccccggggcccaccacacggggcccctcctccccccactgccgccc
cagctgttccgcggggtgcccaatgggtaccatttgaacatgggcgtccccggtggcggc
cagatccctgagggcagggtgccccggtactacctggaggcaggggaggacgaatggtgc
tag
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integrated database retrieval system
