Sardina pilchardus (sardine): 134091757
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Entry
134091757 CDS
T10667
Symbol
cdk5rap1
Name
(RefSeq) CDK5 regulatory subunit-associated protein 1
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spil03016
]
134091757 (cdk5rap1)
Enzymes [BR:
spil01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
134091757 (cdk5rap1)
Transfer RNA biogenesis [BR:
spil03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
134091757 (cdk5rap1)
Prokaryotic type
Methylthiotransferases
134091757 (cdk5rap1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
GST_C_3
Motif
Other DBs
NCBI-GeneID:
134091757
NCBI-ProteinID:
XP_062400383
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Position
9:complement(25305870..25314395)
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AA seq
606 aa
AA seq
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MRSRVLTLYLQKLLKLSSPNLSTHGRSCSVSASVNSNVNVKQKDELFKTKLATGPGFHDF
IKDVSASKKSTSINQESDSRHAYLPEDATDGNSRKVFFETYGCQMNVNDTEIAWSILQKK
GYLRAKELTEADVVLLVTCSVREKAEQTIWNRLKQLTALKKRRTKTQGPMKIGLLGCMAE
RLKSELLEREKLLDIVAGPDAYRDLPRLLALASGGQQASNVLLSLEETYADVMPVQHTTG
QSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVTSILEEVRLLSEQGIREVTLLGQNVNSY
RDTSEQQFCGPEPTQLSRGFSTVYRIRQGGLRFADLLERVSLVDPNMRIRFTSPHPKDFP
DEVLQLIQERPNICKQIHLPAQSGSSRVLQAMRRGYTREAYLELVENVCRIIPGVSLSSD
FIAGFCGETEEDHQESLSLLRAVRYNVGFLFAYSMRKKTHAYHRLHDDVSAEVKQRRLQE
LIAVFREEAARVNGSLVGSTQLVLVEGESKRSAQELSGRSDGNVKVIFPKREVPGLDPGS
HSEPIKLGDYILVKIASASSQSMRGYPVCRTTLSEATRHSADALQQQQQQLSSAQLPKDS
HVHSCG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagatccagagtgttaacgttatatctacaaaagttgttaaagttatcctcgccaaat
ctgtcaacacatggccgtagctgctctgtgagtgcatcggtcaacagcaacgttaatgtt
aaacaaaaagacgaattgttcaagacaaagttagcgactggaccaggctttcatgacttc
atcaaagatgtttctgctagcaagaaatcgacgagcatcaatcaggaatctgacagtaga
catgcatatcttcccgaggacgcaactgatggaaattcaaggaaagtgttttttgaaacc
tatggctgtcagatgaacgtcaatgatactgagattgcttggtcaattctgcagaaaaag
ggatatctccgagccaaagaactcactgaggcagatgttgttctcctagtcacatgttca
gtcagagagaaggcagagcagaccatctggaacagacttaaacagctcactgctctcaaa
aagaggcgaacaaaaactcagggccccatgaagattggacttttaggttgcatggcagag
cgtctgaaatcagagctactggaacgggagaagcttctagacattgtggctggtccggac
gcataccgagaccttccccgcttgttggctctggcctctggtggacagcaggccagcaac
gtgcttctctccctggaagagacctacgctgacgtcatgcctgtgcagcacaccacagga
cagagtgcctttgtgtccatcatgaggggttgtgacaacatgtgcagctactgcatcgtt
cccttcacgcgaggtcgggagcgaagtagaccggtgacctccattctagaggaagtccgg
ctcctctctgagcaggggatccgggaggtcacgcttctgggccagaatgtgaacagctac
cgggacacgtccgagcagcagttctgtggcccggagccgacccagctcagccgtggcttc
agcaccgtgtaccggatccgccagggaggcctgcgctttgcagacctgctggaacgcgtg
tcgctcgtcgatcccaacatgaggatccgcttcacgtccccccacccaaaggactttccc
gacgaggtgctgcagctgatccaggagcggccgaacatctgcaagcagatccacctgccc
gcgcagagcggcagcagccgcgttctccaggccatgcgccgcgggtacacaagggaagcc
tatcttgaacttgtggaaaatgtttgccgcataattcctggggtgagcctgagtagcgac
ttcatcgctggcttctgcggggagaccgaggaggaccaccaggagtcactctctctgctc
cgagccgtgcgttacaatgtgggcttcctgttcgcctacagcatgaggaagaagacccat
gcgtaccaccgtctccacgacgacgtatctgcggaggtgaagcagcggcgactgcaggag
ctcatcgccgtgttccgagaagaggcggcacgcgtcaacggcagcctcgtgggcagcacc
cagctcgtcctggtggagggagagagtaagagatctgctcaggagctgtctggcaggagt
gatggcaacgtgaaggtgatcttccccaagcgagaagtgcctggcctggacccaggttcc
cactccgagccaatcaaactgggagactacatactggtcaagattgcgtcggccagctcc
cagagtatgagaggctatcctgtgtgccgcaccaccctgagtgaggccactcgtcactca
gccgacgccctgcagcagcaacagcagcagctctccagcgcccagctccccaaagacagc
cacgtacactcctgtggctaa
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