Sardina pilchardus (sardine): 134091765
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Entry
134091765 CDS
T10667
Symbol
srsf6b
Name
(RefSeq) serine and arginine rich splicing factor 6b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03040
Spliceosome
spil05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134091765 (srsf6b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134091765 (srsf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134091765 (srsf6b)
Spliceosome [BR:
spil03041
]
Common components
Common spliceosomal components
SR proteins
134091765 (srsf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
134091765
NCBI-ProteinID:
XP_062400393
LinkDB
All DBs
Position
9:complement(25352203..25357364)
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AA seq
369 aa
AA seq
DB search
MPRVYVGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDTRDADDAVYELNGKDL
CGERVIIEHARGPRRDRDGYGGGGYGGGGRSSGYSSRSRSGRDKYGPPVRTEYRLVVENL
SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSQSDMKRAIDKLDGTDINGRKIR
LVEDRSRRQRSYSGSRSRSRSRRRSRSRSRRSKGSRSNSRSRSRSRSRSKRRSSSRRKSR
SKSPARKSRSQTGKSRSRSRRSHSHSASHKSRSRSDARKSRSKSRSKSRSKSRSKSRSKS
RSKSRSKEKSVSKKSRSRSASPMENGEEERAKSTSRSPSPRDDQRNSPADHSASPSPPRS
KSLSRSRSD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgccacgagtttatgtcggcaggttaagttaccatgtccgggagaaagatattcaaagg
tttttcagcggctatggaaagcttttggaagtcgacctgaaaaatgggtatgggtttgtt
gagttcgaggacacccgtgatgccgatgacgccgtgtacgagttgaatgggaaggatctg
tgtggagagcgtgtcatcatcgagcacgcccgtggtccacggcgggatagggatggatat
ggtggtgggggttacgggggtggtgggcgcagcagtggttacagcagcaggagccgcagt
ggcagggacaagtatggcccccccgtccgcaccgagtaccgcctcgtcgtggagaacctg
tccagtcgctgcagctggcaagacctgaaggacttcatgcggcaggctggagaggtgact
tatgccgatgcccacaaggagcggactaatgagggagtgatagagttccgctcccagtcc
gacatgaagcgagccatagacaagctggacggcaccgacatcaacggcaggaagatccga
ctggtggaggaccgttcgcgtcggcagcgttcatactcaggaagcaggtccaggtctcgt
agccgtagacgctctcgcagcaggagccgcaggagcaaaggttctcgcagcaactccaga
tcgcgctcccggtcaagatcccggagcaagaggagatctagttccaggaggaagtcccga
tccaagtctcctgcccgcaagtcccgatcccaaactgggaagtctcggtctcgctcccgc
aggtcacacagccactccgcgagccacaagtctcgttcacgctcggatgcccgaaagtcc
cgctccaagtcccgctccaagtcccgctccaagtcccgctccaagtcccgctccaagtcc
cgctccaagtcccgctccaaggagaagtcggtgagcaaaaagtcccgcagccgctcggcg
tcgcccatggagaatggggaagaggagcgtgccaagtccacctcccgctccccgtctcca
cgagacgatcagcgcaactcgccggctgatcactcagcctccccgtcgccgccacgttca
aagtctctttctcgctccaggtctgattaa
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