Sardina pilchardus (sardine): 134091818
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Entry
134091818 CDS
T10667
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134091818 (ccdc174)
03041 Spliceosome [BR:
spil03041
]
134091818 (ccdc174)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134091818 (ccdc174)
Spliceosome [BR:
spil03041
]
Complex C
Other components
EJC/TREX
134091818 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
134091818
NCBI-ProteinID:
XP_062400476
LinkDB
All DBs
Position
9:complement(27195974..27200903)
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AA seq
459 aa
AA seq
DB search
MDKKKQFNVTASSLVDLKAELYRKQQEFRQEKLTQHGGTSAAGSADGPKLKKPSIWSKQN
EGVSARAQRDVELSAEEENNLDKSKKKLEEKARLYEQMTKGDFPDEETEGLFLVDFTQKI
IDQRRNAHANTSGAYRDGEDEDQQIPVPPPQNPDEEWVEYVDALGRSRKCLKKDLPDFKK
MDQDFQKSRLGSGDKSLLSEDMRREIQREQWAEEEEESMKRPMGPIHYENIREQEARELG
VGYFSFAQDEEQRRKQRETLDMLRDQTTDQRTKRERLKEKRKALLQARLSKVRMRKMKKS
KLDGTEDESGAAVEEEEEEDEEGVGEVPETPSVPKVEVEIQERKDTKPGVPHVREWDRGK
ESMWNQWVSGRRDERDSEFAPPSAYFGGQNRAGSRSRTSAEEDQDKPRLSFKWAGTHGHS
STHTAQQSASHTPAPPQPSKPTQQDQSLEDMLSFYKNST
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaagaagcaatttaacgttacagcctcgtcgctggtggacctgaaggcagag
ctttacaggaaacagcaggagtttcgacaggaaaagctcacccagcatggaggaacttct
gctgctgggtccgctgacggaccaaagcttaagaagcccagcatctggagtaaacagaat
gaaggcgtgtctgcacgtgctcaaagggatgtggaactcagtgcagaggaagagaataat
ctggataaatcaaaaaagaaactggaggagaaggctcgtctctatgagcaaatgaccaaa
ggagatttcccagatgaagagacagagggacttttcctggtggacttcacccagaagatc
atcgaccagagaagaaacgcacacgcaaacacctcgggtgcgtacagagatggagaggac
gaggaccaacagattccagttccaccccctcagaaccctgatgaagaatgggtggaatat
gtcgatgccctaggaagatcacgtaaatgtttgaagaaagatttacctgactttaagaaa
atggaccaggatttccagaaaagcaggctgggtagcggtgataagagtctgctctcagag
gacatgcggagagagatccagagagagcagtgggccgaggaggaggaggagagcatgaag
agacccatggggcccattcactacgagaacatcagggaacaagaggcccgagagctgggt
gtcggatacttctcgtttgctcaggatgaggagcagcgacggaaacagagggaaaccctg
gacatgctcagagatcagaccacagaccagcgcactaagagggagcgactgaaggagaag
aggaaggccctgctgcaggctcgtctctccaaagtgaggatgaggaagatgaagaagagc
aaactggacggaaccgaggacgagtcaggtgctgcggtggaggaggaggaagaggaggat
gaggagggtgttggagaggttcctgagacaccgtccgtgccgaaggtggaggtggagatc
caggagaggaaggacaccaaacctggagttcctcacgttcgagagtgggacagagggaaa
gagtccatgtggaaccaatgggtcagcggtcgccgtgacgagagggactcggagtttgct
ccgccgtcggcgtacttcggcggtcagaaccgggccggcagcagaagcagaacctcggcc
gaggaggaccaggacaaaccgaggctctccttcaagtgggccgggacgcacgggcactcg
tccacacacaccgcccaacagtcagcgagtcacacaccagctcctcctcagccgtccaag
ccaacacagcaggaccagagtctggaggacatgctctccttctacaagaactctacctag
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