Sardina pilchardus (sardine): 134092111
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Entry
134092111 CDS
T10667
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
spil04030
]
134092111
G protein-coupled receptors [BR:
spil04030
]
Rhodopsin family
Vision
Opsin
134092111
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7tm_4
7TM_GPCR_Srv
7TM_GPCR_Srsx
TAS2R
Motif
Other DBs
NCBI-GeneID:
134092111
NCBI-ProteinID:
XP_062400894
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Position
9:3994748..4001180
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AA seq
382 aa
AA seq
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MASSVNLTEPYSPSISIAENPTVEPFFFPRSGYTVLSLMASSVNLTEPYSSSISIAENPT
VEPFFFPRSGYTVLSVVMGMVTVTAVVLNVTVIVVTARHRQLRQPLNYALVNLAVADLGT
ALMGGVPAVLSNAAGRHILGRAGCILEGFSVALFGITALCTVALIAVERLFVVCKPLGSV
KFQGWHAVVGVAISWAWSLVWNTPPLLGWGSYALEGVKTSCGPDWHSRQPGNVSYILCYF
LLCFAVPFTLIVLSYTWLLWTLRQVAQMSGGAAAKAEAKVACMVVAMVMAFLVSWMPYSV
LALVVVFDPEVKVAPLVAMLPVYLAKSSTVYNPMIYIFMNKQFQKYAVPFLFCGWSPWEL
EESDDEPHTTISSVGNQISPEP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcagttaaccttacagaaccctactccccctccatctccatcgctgagaac
cccacagtggaaccgttcttcttccctcgttctggctacaccgtcctctcactaatggct
tcgtcagtgaaccttacagaaccctactcctcctccatctccatcgctgagaaccccacc
gtggaaccgttcttcttccctcgttctggctacaccgtcctctcggtggtcatggggatg
gtcacggtgaccgcggtggtcctgaacgtgactgtgatcgtggtgactgcccggcatcgc
cagctccgccagcccctgaactacgccctggtgaacctggccgtggctgacctgggcacg
gcgctgatgggtggagtgcccgctgtcctgtccaacgcggccggccgacacatcctggga
agggcaggctgcatcctggaggggttctccgtggctctctttggcatcacggctctctgc
acggtggctctgattgccgtggagcgtctcttcgtggtgtgcaagccgctggggagcgtc
aagttccagggatggcacgccgtggtgggcgtggccatctcctgggcgtggtctctggtg
tggaacacgccccctctcttgggctggggcagctacgcgctggagggcgtcaagacgtcg
tgcgggccggactggcacagccgccagccgggcaacgtctcctacatcctctgctacttc
ctgctctgcttcgccgtcccgttcaccctcatcgtgctgtcctacacctggctgctctgg
accctacgacaggtggctcagatgagtggtggagctgctgctaaagccgaggccaaggtg
gcgtgtatggtcgttgccatggtgatggcgttcctggtcagctggatgccctactccgtg
ctcgccctggtggtcgtgtttgaccccgaggtcaaggtcgctcctcttgttgccatgtta
ccggtgtacctggccaaaagcagcacagtctacaaccccatgatctacattttcatgaac
aaacagttccagaagtatgcggtgcccttcctcttctgtgggtggagcccctgggagttg
gaggagtcggacgacgagcctcacaccaccatctcctccgtcggcaaccagatctccccc
gagccatga
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