Sardina pilchardus (sardine): 134092159 Help Entry 134092159         CDS       T10667                                  Symbol col2a1b Name (RefSeq) collagen, type II, alpha 1b   KO K19719   collagen type II alpha Organism spil  Sardina pilchardus (sardine) Pathway spil04510   Focal adhesion spil04512   ECM-receptor interaction spil04518   Integrin signaling Brite KEGG Orthology (KO) [BR:spil00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     134092159 (col2a1b)    04518 Integrin signaling     134092159 (col2a1b)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     134092159 (col2a1b)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:spil00536]     134092159 (col2a1b) Glycosaminoglycan binding proteins [BR:spil00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    134092159 (col2a1b) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  134092159 NCBI-ProteinID:  XP_062400935 LinkDB All DBs Position 9:12318453..12458962 Genome browser AA seq 1489 aa AA seqDB search MSVASTISMTRSDRCRSWLAQTCPERWRTEEDPGSCLQEGSRYNDKDVWKPEPCRICVCD TGTVLCDDIICEEPKDCPNAEIPFGECCPICPEQPAAPSGVPGAKGQKGEPGDITDVVGP RGPGGPMGPSGEQGPRGDRGDKGEKGSLGPRGRDGEPGIPGNPGPPGPPGPNGPPGLGGN FAAQMAGGFDEKSGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGNPGEGGEPGSSGP MGPRGPPGPSGKPGDDGEAGKPGKSGERGPTGPQGARGFPGTPGLPGIKGHRGYPGLDGT KGELGAAGSKGESGSPGENGAPGPMGPRGLPGERGRPGPSGNAGARGNDGLPGPAGPPGP VGPSGAPGFPGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGAGGNPGTDGIPGA KGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGMSGDPGIAGFKGEAGPKGELGRAGP QGPLGPAGEEGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGV SGPKGAGGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPAGAAGEDGRPGPPGPQGARGQ PGVMGFPGPKGATGEGGKAGEKGSGGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGQ PGPSGFQGLPGPPGPPGEGGKPGDAGVPGEAGPGGATGPRGERGFPGERGSAGPQGLQGP RGLPGTPGTDGPKGATGPGGAPGAQGPPGLQGMPGERGPGGISGPKGDRGDNGEKGPEGA PGKDGGRGLTGPIGPPGPGGPNGEKGESGPAGPSGAAGARGAPGDRGETGPPGPAGFAGP PGSDGQPGIKGDQGEPGQKGDAGAPGPQGPSGAPGPSGPTGVSGPKGARGAQGPPGATGF PGSAGRVGPPGPNGNPGPSGPAGPPGKDGPKGVRGDGGPPGRQGDAGLRGPAGTPGEKGE SGEDGPPGPDGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGAGDRGP PGPVGPPGLTGPAGEHGREGNPGSDGPPGRDGAAGIKGDRGNTGPVGAPGAPGATGAPGP VGPTGKQGDRGEAGPQGPSGAPGPAGARGMAGPQGPRGDKGEAGEGGERGQKGHRGFTGL QGLPGPPGQNGDQGATGPAGPAGSRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGETGP SGPQGNPGPPGPPGPPGPGIDMSAFAGLGQPEKAPDPMRYMRADQAAGGLRQHDAEVDAT LKNLNSQIENIRSPEGSKKNPARTCRDLKLCHPDWKSGEYWIDPNQGCTVDAIKVFCNME TGETCVNPKPSSIPRKNWWSSKGGDRKHVWFGETMNGGFHFSYGDESLAANTASIQMTFL RLLSTEASQSITYHCKNSVAYMDAATGNLKKAVLLQGSNDVEIRAEGNSRFTYSALEDGC TRHTGQWGKTVIEYRSQKTSRLPIVDIAPMDIGGPNQEFGVDVGAVCFL NT seq 4470 nt NT seq  +upstreamnt  +downstreamnt atgtctgtggccagcaccatctcaatgacaagaagcgatcgttgtagatcatggctagct cagacctgcccggaacgatggagaacagaggaagaccctggcagctgcctccaggagggc agtcgctataacgacaaggacgtgtggaagccggagccttgccgcatctgcgtatgcgac acaggcactgtcctctgcgacgacataatctgcgaggagcccaaagactgccccaacgcc gagatcccattcggagagtgttgccccatctgccccgagcagcctgctgcccccagtggt gtaccaggtgcaaagggacagaaaggtgaacccggagatatcacagatgtggtaggacca agaggacctggaggacccatgggaccctcaggagaacagggcccacgtggagacagggga gacaagggagagaagggatctctcggcccccgtggcagagatggcgagcctggcattcct ggcaaccccggaccccctggacccccaggaccaaatggaccccctggacttggcggaaac tttgctgctcagatggctggtggttttgatgagaagtctggtggtgcccagatgggagtg atgcaaggacctatgggcccaatgggacccagaggaccacccggccccagcggatctccc ggaccacaaggtttccaaggcaaccccggagagggtggagagcccggttcatctggcccg atgggtccccgtggcccacctggaccctctggcaaacccggagatgacggtgaggctggt aaacctggtaaatctggtgagcgtggacctactggccctcagggagctcgtggattccca ggaactcctggactgcctggaatcaaaggacacagaggttacccaggtcttgatggtact aagggagaacttggagccgctggatccaagggagagtctggttctcccggtgagaacggt gcccctggacccatgggccctcgtggtctccccggtgagagaggccgtcccggaccctct ggcaatgctggtgctcgcggaaatgacggtttgcccggccctgctggtcctcctggccca gttggtccatctggagctcctggcttccccggctcccctggttctaagggtgaggctggc cccactggcgctcgtggacctgagggagcccagggtccccgcggagagtctggaaccccc ggatctcccggcccctccggagctggcggcaaccccggtactgatggtatccctggagct aaaggatctgctggcgctcccggtattgctggtgcccctggcttccctggaccccgtgga cctccaggaccccagggtgccactggacctcttgggccaaagggcatgtctggtgacccc ggtatcgcagggttcaagggtgaggctggacccaaaggagagcttggacgtgctgggccc caaggtccccttggtcccgctggagaggaaggaaagagaggtccccgcggagagcctggt gctgctgggcccctcggacctcccggagagagaggcgctcctggtaaccgtggtttccct ggtcaggatggtctggctggtcccaagggtgcccctggtgagagaggacctgctggagtg tctggacctaagggcgctggtggtgaccctggtcgtcccggagagcctggtcttcctgga gccagaggtctcactggtcgccctggtgatgccggtcctcagggaaaagttggccccgct ggcgctgctggtgaggacggtcgccctggtcctcctggccctcagggagcccgtggtcag cctggtgtgatgggattccccggccccaagggagccactggagagggaggaaaggctgga gagaaaggatccggcggtgctcctggtctgagaggtcttcctggtaaagatggtgagaca ggtgctgctggaccccccggccctgctggacccgctggagagagaggagagcagggacag cccggaccctccggcttccagggcctgcctggacctcccggcccccctggtgagggcggc aaacctggtgatgctggtgttcctggagaggccggccctggtggtgctactggacccaga ggagagcgtggattcccaggagagagaggcagcgctgggcctcagggtctgcagggaccc cgtggtctccccggaactccaggaactgatggacccaagggtgccactggaccaggtggt gctcccggtgcccagggaccccccggtctgcagggaatgcccggagagagaggacccggt ggcatctctggacccaagggagacagaggtgacaatggcgagaaaggacccgagggtgct cctggcaaagatggtggaagaggtttgaccggccccatcggtcctcctggaccaggcggc cctaatggcgagaagggagaatctggccctgctggaccttctggagctgctggtgcccgt ggtgctcctggtgacaggggtgagactggtcccccaggtcccgctggattcgctggtcct cctggctctgatggtcagcctggtatcaagggagatcagggtgagcctggacagaagggt gatgctggtgcccccggaccacagggaccctccggagcccctggaccatctggacccact ggtgtgtctggacctaaaggtgctcgtggtgcccagggacctcctggtgccactggtttc cctggatctgctggacgtgttggacccccaggtcccaatggtaaccctggtccttcaggc cctgctggtccccctggtaaagatggtcctaagggagtgcgcggagacggcggtccccca ggcagacagggagacgctgggctgcgtggacctgctggaacccccggagagaagggagag tctggagaggatggtccccctggtcccgacggtccatctgggcctcagggtctggctggt cagcgtggtatcgtgggtcttcccggacagcgtggtgagcgaggcttccccggcctgcct ggaccatctggtgagcctggaaagcagggagctcccggtggcgctggagaccgcggaccc cccggcccagtcggacctcctggtctgaccggacccgctggagagcatggtagagagggc aaccctggatctgatggtcctcctggtagagacggtgctgctggaatcaagggtgaccgt ggcaacaccggtcctgttggcgctcccggtgcccctggtgctactggcgcccccggccca gtcggacccaccggcaaacagggagatagaggagaggctggtccccaaggaccttctgga gctcctggacccgctggcgcaagaggcatggccggaccccaaggaccacgcggagacaag ggagaggctggcgagggtggagagagaggacagaagggacacagaggcttcaccggtctg cagggtctgcctggacctcctggtcagaatggtgaccagggtgctactggacctgctggc cccgctggttcaagaggaccccctggcccagttggaccttctggaaaggacggttccaat ggaatgcccggccctatcggacctcctggacctcgtggacgttctggcgagactggtccc tccggtccccaaggtaaccccggacctcccggtcctcctggtcctcccggccctggcatc gacatgtccgcattcgccggccttggtcagcccgagaaggcccccgatcccatgaggtac atgcgcgccgaccaggcggccggaggcctgaggcagcacgacgccgaggtggacgccacc ctcaagaacctcaacagccagatcgagaacatccgcagccccgagggctccaagaagaac cccgctcgcacctgccgcgacctcaagctgtgccaccccgactggaagagcggcgagtac tggatcgaccccaaccagggctgcaccgtggatgccatcaaggtcttctgcaacatggag actggcgagacctgcgtcaaccccaagccttccagcatcccacgcaagaactggtggtcc agcaagggcggagaccgcaagcacgtctggttcggcgagaccatgaatggcggtttccac ttcagctatggcgatgagagcctggccgccaacaccgccagcatccagatgaccttcctg agactgctgtccacggaggcctcccagagcatcacctaccactgcaagaacagcgtggcc tacatggacgcggccacgggcaacttgaagaaggccgtgctgctgcagggctccaacgac gtggagatccgcgccgagggcaacagccgcttcacctacagcgcgctcgaggacggctgc acgagacacacagggcaatggggcaagacagtcattgagtacagatcacagaagacctct cgtctgcccatcgtggacatcgcacccatggacatcggaggccccaaccaggagtttggc gttgatgttggcgcagtctgcttcttgtaa

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