Sardina pilchardus (sardine): 134092192
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Entry
134092192 CDS
T10667
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134092192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spil02000
]
134092192
Transporters [BR:
spil02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134092192
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134092192
NCBI-ProteinID:
XP_062400967
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Position
9:19408850..19434096
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AA seq
780 aa
AA seq
DB search
MTSGINTIRHIEGHKLVQMGTDAHLESWITDYLTERPQFRTNAAARLVYNQPRRAHVIPL
LIQLHWLPLAARIKFKTLTFAYKVFSGSAPTYLNALYSYLKEWESQSMAGSTPVGHIQLS
AATNFKGTSFIQLEKVISDMDTFYLQGFLRCCPTFKILALLKWSMENSYEAEVQQKLVGG
GGATVVPPKSQPAEREQWSSKMEFFLAAAGHVVGLGNVWRFPYLCYKNGGGAFFIPYIVF
LFTCGMPLFFLETSLGQYTSQGGITCWKKICPLFEGLGYGSQVVVLYTGIYYIIILAWAF
LYLFFSFSSELPWANCQNPWNTENCFEYDQTNLTEDITVKTTSSVVEFWERRILGLSSGI
EELGSVRWDLALCLLLAWVICYFCVWKGVKTTGKVVYLTATFPYVMLVVLLVRGLTLPGA
ADGIKFYLYPDPARLADPQVWMDAGSQVFYSYGVCTGVLTALGSYNKYDNNCYKDCIYLC
LLNSLTSFVAGFAIFSVLGFMAKEQELDISMCFLVAMTGPGLAFIAYPRAVALMPLPQLW
AIFFFIMIVFLGLDSEFVCHEALVTAISDMYPSFFQEPYKRKVLLLIISIASFLIGLVMV
TEGGLYVFQLFDYYACSGMTLLTFAILQSICIGWVYGAGHQYDNIEDMIGYRPWPVMQYC
WQYVTPIVCTATFIFFIAKHTPLQFNNSYEYPWWGYAIGGFFTLSSTLVVPLWMVYAICT
TPGTMHERLRTLCTPAKDLLPRGQSQQKELQLVTFETFTMLQTLRTSSTHSDSVFLKGPV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtggcattaacaccattcgtcacattgagggacacaagcttgtacagatgggt
actgatgctcacttggaatcctggatcactgactacctgacggagagaccacagttcagg
acgaatgcagcagcacgcctggtctacaaccaacccagaagggcgcatgtcatcccattg
ctcatccagctacactggctaccgctggccgcccgcatcaaattcaagactctaacgttt
gcctacaaagtattctctggctctgctcccacctatttgaatgccctctacagttacctc
aaagagtgggagagtcagtccatggctgggagtacccccgtcggccacatacaactttcg
gctgctaccaacttcaaagggacctccttcatccaactggaaaaggtcatcagcgacatg
gacactttctacctccaaggtttcctcagatgctgtcccactttcaagatccttgctctt
ttgaaatggagtatggagaattcatatgaggcagaagttcagcagaagctggtgggtggt
ggtggagccacagtagtcccacccaaaagtcagcctgcagagagagaacagtggtccagc
aaaatggaattcttcctggctgcggctggacacgtagttggtcttgggaatgtgtggagg
tttccttacctgtgctacaagaatgggggaggtgctttcttcataccatatatagtgttc
ctttttacctgtggaatgcctctctttttcctggagacttcgttggggcagtacaccagc
caggggggcattacctgttggaagaaaatctgcccactttttgaaggattgggctatgga
agtcaggtggttgttttatacactggaatctattacatcatcattctggcctgggcattc
ctctatctatttttttccttcagttctgagctgccctgggcaaactgtcaaaacccctgg
aacacagagaattgctttgagtatgaccagaccaatctgactgaggatatcactgtgaaa
acaacatcatctgttgtagaattttgggagaggaggattctgggactgtctagtggaatt
gaggagctgggttctgtgagatgggacttggccctgtgtcttctcctagcttgggtcatc
tgctatttctgtgtctggaaaggagtgaagaccacaggcaaggtggtgtacctcacagct
accttcccctacgtcatgctagtggtgctgctggtccgggggctcacactgcccggggca
gcggatggcatcaagttctacctctaccctgatccagcacgcctggctgaccctcaggtg
tggatggacgctgggagccaggtcttttactcctatggagtttgcactggtgtcttaaca
gctcttgggagctacaacaaatatgataacaactgttacaaagactgtatttacttgtgc
ctgttgaacagtctgaccagttttgtggccggttttgccatattctcagtattaggcttc
atggccaaggagcaagagctggatatctctatgtgtttcctcgttgccatgacaggccct
gggttggcatttatagcatatccacgcgcagtggctttaatgcctcttccccaactatgg
gccattttcttcttcatcatgattgtgttccttgggttggatagtgagtttgtttgccat
gaagctttggtgaccgctatcagcgacatgtatccatccttcttccaagagccatataaa
cgtaaggtcctcctcctcatcatcagcatagcgagcttcctgattggcctggtaatggtg
acagagggtggcctgtatgttttccaactgtttgattactatgcttgcagtggcatgact
ctgctgacttttgccattttgcagtccatttgcatcggatgggtgtacggtgcaggtcat
cagtatgacaacattgaagacatgataggctaccggccttggcctgtgatgcaatactgt
tggcaatatgtaacaccaattgtgtgcacagctacttttatcttcttcattgccaagcat
accccgctgcagtttaacaactcatatgagtatccgtggtgggggtatgctattggtgga
ttcttcaccctgtcctctactctggtggtgcctttgtggatggtgtatgccatctgtacc
accccaggaaccatgcatgagagactacgaacgctgtgcacccctgcaaaggacctcctg
cccagaggccagtcccaacaaaaggagctccagttggtcacttttgagacattcaccatg
ttacaaacactgcgtacgagtagcacccactcagactctgttttccttaaaggaccagta
taa
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