Sardina pilchardus (sardine): 134092298
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Entry
134092298 CDS
T10667
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134092298 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spil03029
]
134092298 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
spil04031
]
134092298 (rhot1b)
Mitochondrial biogenesis [BR:
spil03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
134092298 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
134092298 (rhot1b)
GTP-binding proteins [BR:
spil04031
]
Small (monomeric) G-proteins
Rho Family
Miro
134092298 (rhot1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_1
EF-hand_7
Arf
RsgA_GTPase
PduV-EutP
MMR_HSR1
Dynamin_N
AAA_22
AAA
AAA_5
FeoB_N
EF-hand_8
AAA_25
nSTAND1
Motif
Other DBs
NCBI-GeneID:
134092298
NCBI-ProteinID:
XP_062401088
LinkDB
All DBs
Position
1:complement(43404079..43419136)
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AA seq
660 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVTEEFPDVVPYRAEEITIPADVTPERVPTHIVDYSE
VEQTDEQLYQEITKANVICIVYSVNNKNSIEKVTSHWIPLINDRTDKDSRIPLILVGNKS
DLVEHSSMETILPIMNKYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPDQKE
MKVACLRALTRIFKVSDLDNDGILNDNELNFFQRTCFNSPLAAQALEDVKNVVRKNINNG
VCDNGLTLNGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELHQDYLFPPLKIPPDCTTE
LNHNAYLFLQSIFDKHDKDRDCALSPEELKDLFDVFPYMPWGADVNNTVCTNDQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIIAEQESQAAAMTVTRDKKIDLQKRQTQRNVFR
CNVFGAIGSGKSGFLQAFLGRNLMRQRTISEEHKSYYAISTAYVYGQEKYLLLHEVFPDF
DFLSDAELSCDVVCLIYDASNPFSFEYCAKVFKQYFMDSKTPCMMVASKADLPEVKQQQA
LTPLEFCRKHKMPPPQSYTCNTAAAPNRDIFIKLTTMAMYPHARLRCMCTCNRCTFCLCQ
NFLNSELMQTVKAKLYTVIFSRHMTQADLKSSTFWLKASVGATVFVVLGFAMYRAMLRSR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaggacgtgaggatattacttgtaggagaacccaaagtagggaagacttccctt
atcatgtctctggtcacagaggagtttccagatgtggtgccctatcgggctgaagaaatc
accattccggccgatgtcactccagagagagtgcccacacacatcgttgactactcagag
gtcgagcagacagatgagcagctctatcaggaaatcaccaaggcaaatgttatctgcatt
gtctattccgtcaacaacaagaattccattgaaaaggtcaccagtcattggattccacta
ataaatgacaggacagataaggacagcaggattcccctcatcctggtgggcaacaagtcc
gacctggtggagcacagcagcatggagaccatcctgcccatcatgaacaagtacacggag
atcgagacgtgcgtggagtgttctgccaagaacctgaagaacatctcggagctcttctac
tatgcccagaaggcagttctgcacccaaccggtccactctattgccccgaccagaaggag
atgaaggtggcttgtcttagggccctcacacgcatcttcaaggtgtccgatttggacaat
gatggcatccttaatgataacgagctcaacttcttccaaaggacatgtttcaacagcccc
ctggctgcccaagccctggaggacgtgaagaacgttgtgcggaagaacataaataatgga
gtgtgtgacaacggcctcacgctgaatgggttcctgttcctgcacacactcttcatccag
agaggaaggcacgagaccacctggaccgtcctgcgccggtttggctacgacgacgacctg
gagctccaccaggactacctcttccccccgttaaaaatacctcccgactgcaccaccgag
ctcaaccacaatgcttacctcttcctccagagcatcttcgacaagcatgataaggaccgg
gactgtgccctgtcccccgaggagctgaaggacctgtttgatgtctttccctacatgccc
tggggcgccgacgtcaacaacaccgtctgcaccaacgaccagggctggatcacctaccag
ggctacctctcccagtggacgctcaccacgtatctagacgtgcagcggtgcctggagtac
ctggggtaccttggttactccatcattgctgaacaggagtcccaggcagctgccatgaca
gtgactcgggacaagaagattgacctgcagaagaggcagacgcagcgcaacgtgttccgc
tgtaacgtgttcggcgccatcggcagtggcaagagcggcttcctgcaggctttcctgggg
aggaacctcatgcgccagagaacaataagtgaagaacacaagtcttattatgcaatcagc
actgcctatgtctacggtcaggagaagtacttactgctccatgaggtcttcccagacttt
gatttcctctcggacgcagagctgtcctgcgatgtcgtgtgcctgatctacgacgccagc
aaccccttctcttttgagtactgcgcaaaagtctttaagcaatacttcatggacagcaag
acgccgtgcatgatggtggcgtccaaggccgacctgcccgaggtcaagcagcagcaggcg
ctgaccccgctggagttctgccgcaagcacaagatgccgccgccgcagtcctacacctgc
aacacggccgccgcgcccaacagggacatcttcatcaagctcaccaccatggccatgtac
ccccacgctcgtctgcgctgcatgtgcacgtgcaaccggtgcaccttctgtctctgtcag
aacttcctcaactctgagctgatgcagaccgtgaaggccaaactctacaccgtcattttc
agcaggcacatgacgcaggcggacctgaagagctccaccttctggttgaaggcgagcgtt
ggagccacagtgtttgtggtgctgggctttgccatgtacagagccatgctcaggtcccgg
tga
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