Sardina pilchardus (sardine): 134092414
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Entry
134092414 CDS
T10667
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134092414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134092414
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134092414
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134092414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-B_box
Prok-RING_4
ANCHR-like_BBOX
GeBP-like_DBD
zf-RING_6
zf-RING_4
She9_MDM33
DUF733
Motif
Other DBs
NCBI-GeneID:
134092414
NCBI-ProteinID:
XP_062401247
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All DBs
Position
1:43579576..43586716
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AA seq
440 aa
AA seq
DB search
MATDTASLAGLEEELTCSICMTTFENPVSLPCGHNFCQGCLDVAWKENAPLACPQCRHNY
SSKPELKKNTVLSAIVAAITMKSSSSESDHCKDVPVKQEPDVIQCDTCREVKAFKTCLTC
MASFCEEHLKPHEENPVFRAHQLTDPSGDLQERICQDHHKIKEFFCKQHECSICSTCLQA
HRGCDYTTPQERREQKESEISGMLSLLERKINKNNIVIAQMGQQELELQDDAVSRKKMVS
TKYQLIRDLIDRDEQDALKAVDKELESGQTKLQSLRKTFGQNVERMSQTKVKLNDLLSRA
DSLSFLQASVQLPFNTKFDPYCPRMNTDSEAVTAYQSSAVAVKQLLDKILSVPAENRISL
LADFEMVLVKGTSSGSSQAVHGNPGAPFRPGGQRMNPTHPNKKPDHMRGQNDQRGEKSNW
QHDKGTVCLEMCVVSCWIWL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatactgcatcactggccggcctagaggaagaactcacttgcagtatctgc
atgactacgtttgaaaacccagtttctctcccttgtggtcataacttctgtcaaggctgt
ttggatgtggcatggaaagaaaatgcccccctggcatgtcctcagtgcaggcacaattac
tctagcaaacccgagctgaagaaaaacactgtcctaagcgctattgttgcggccattaca
atgaagtcatcttcatcggagtcagaccattgcaaagatgtaccagtcaagcaggaacca
gatgttatccaatgtgatacctgcagggaggtaaaagcatttaaaacctgccttacatgc
atggcctcgttctgtgaggaacatctgaagccgcacgaggaaaatcctgttttccgcgcg
caccaactgaccgacccttcaggagacctgcaggagcgcatttgccaggaccatcacaag
atcaaagagttcttctgcaagcaacatgagtgcagtatctgcagcacctgtctgcaggcg
catcgaggttgcgactacaccaccccacaggaaagacgagaacagaaagagtctgagata
agtggtatgttgagtttgcttgagaggaagatcaacaagaacaacattgttatcgcccaa
atggggcagcaggagttggaactacaggatgatgcggtttctcgtaagaagatggtgagc
acaaaatatcagctcataagggatctgatcgacagggatgagcaagatgctttgaaagct
gtggataaggaattggagagtggtcagaccaagctccagtctctaaggaagacatttggt
cagaatgtggagaggatgagccaaaccaaagtgaagctcaacgaccttctgtcaagagcg
gattcgttgtccttcctgcaggcttcagtccaacttcccttcaacaccaaatttgaccct
tactgcccccgtatgaacacagactctgaagctgtgacagcctatcaatcctctgctgtt
gctgtgaagcagctactggacaaaattctgagtgtaccagcagaaaaccgcatctcactt
cttgcagattttgagatggttcttgtcaaaggaacctcctcgggttcttctcaggcggtg
catggcaacccaggtgctccctttagaccaggtggacagaggatgaatccgacacatcca
aacaagaagccagaccacatgagggggcaaaatgaccaaaggggagaaaaatcaaactgg
caacatgataaaggtactgtatgtctggaaatgtgtgttgtgagctgttggatttggcta
tga
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