Sardina pilchardus (sardine): 134092441
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Entry
134092441 CDS
T10667
Symbol
scn8ab
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit b
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134092441 (scn8ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134092441 (scn8ab)
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
134092441 (scn8ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
ATP-synt_B
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
134092441
NCBI-ProteinID:
XP_062401291
LinkDB
All DBs
Position
9:complement(3577753..3638797)
Genome browser
AA seq
1978 aa
AA seq
DB search
MAAPLFAPPGPDSFKYFTPESLVNIEKRIEEEKRKKPVKPRSDSSHRDESEDAGPKPNRD
LEAGKSLPFIYGDIPPGMTATPLEDLDPYYQTMKTFIVLNKGKTIFRFSATPSLYIISPF
SIFRKIAIKILIHSLFSMIIMCTILTNCVFMTFSDPPPWSKQVEYVFTGIYTFESLTKIV
SRGFAIDSFTFLRDAWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVFWPINLNDTYLSNGSK
GFDWKEYIMNDTNFYFLPGQLDALLCGNSSDSGRCPEGFTCMKAGRNPNYGYTSFDSFGW
AFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQN
QATMEEAEQKEAEFKAMLEQLKKQQEDAQAAAMATSAGTVSEDALVDGGGGEHVSRSSSE
ESKLSSKSAKERRNRKKKSRQKEQEKEKGDSEKVVKSESDDGSKRSRFRFPDNRLGRKTS
IMDQSLLSIPGSPFMSRHNSRSSIFSIKGRGGGGGGGKDVGSENEFADDEHSTVEESEDR
RGSLFIPYRRNSYSGYSQGSSRLNPLAPHTGGKRNSTVDCNGVVSLIGPKGPGRLLPETT
EVDCKRKLSGSLMVSVDQLNMSFSRKERANSAMTVVTNTLVEELEDSQRSCPPCWYKFAN
TFLIWECFPLWVKIKEIVNLIVMDPFVDLAITICIVLNTVFMAMEHYPMTPHFEEVLSVG
NLVFTGIFTAEMFAKLVAMDPYYYFQEGWNIFDGFIVSLSLVELGLADVEGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKI
AVDCVLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMVIGNLVV
LNLFLALLLSSFSADNLAATDDDGEMNNLQISCIRIKKGIAWAKVHMRILVAHVLKKKLE
EDEVKPLDDIFDEKVKCIANHTGADIGRGDILDYQKNGNGTTSGIGSSVGKYMIDEDRMS
FIHNPNLTVRVPIAVGESDFENLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDEDEM
AVVEVVEEYVDPEACWTEGCIARYKCCDVPITEGWGKYWWFLRKTCYLIVEHNWFETLII
FMILLSSGALAFEDVYIEQRKTIQIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWC
WLDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIP
SIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCWNETSEEYFKPDEVNNRTQCFELISLNHT
EVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEDQPMYEDNIYMYIYFV
IFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIP
RPLNNFQGKVFDFVTQQVFDISIMILICLNMVTMMVETDDQSEETEETLYWVNFVFIVVF
TSEFVLKLFALRHYYFTNGWNVFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIG
RILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKRELGIDDM
YNFETFGNSMIILFMITTSAGWDGLLAPILNYDPDCNPRKENPGTTVRGNCGNPSVGIFF
FVMYIIVSFLIVVNMYIAIILENFSVATEESADPLCEDDFESFYEIWEKFDPDACQFITF
AKLPDFADTLEHPLRVPKPNIIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGDLDMM
RQQMEERFVAANPSKVSYEPITTTLRRKQEEVSAVVIQRAYRGHLARSGFICKRRRPANN
KLENGETNQEKKENTPSTASLPSYDSVTKPEKDKKDDNEGKGRKDKGRNQKEVRESKC
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccccctgtttgcacctccaggacctgacagtttcaagtacttcacgcccgag
agtctcgttaacattgaaaaacgcatcgaggaagagaagaggaagaagcctgtcaagcca
cgctcggacagcagccaccgcgatgagagcgaggacgccgggcccaagcccaaccgcgac
ctggaggcgggcaagagcctgcccttcatctacggggacatcccgccgggcatgacggcc
acaccgctggaggacctggacccctactaccagaccatgaaaacatttatagtactaaac
aaagggaaaacaatcttcaggttcagcgcgacaccgtcattgtatatcattagtccattc
agtattttcagaaaaatagcaattaaaattttgatacactcattattcagcatgatcatt
atgtgtactattttgacaaactgcgtattcatgacatttagcgatccacccccctggtcc
aaacaagtggagtacgttttcaccggaatctacacctttgaatctctgacaaagattgtg
tccagaggcttcgctatagatagcttcacgttcctccgagatgcctggaactggctggac
ttcatggtcatatccatggcatatgtaacagagtttgtggacctggggaatgtgtccgcg
ctgagaacattcagggttctgcgagctctgaaaactatttctgtgattccaggcctgaag
accattgtgggcgctctgatccagtcagtgaagaagctgtcggacgtgatgatcttgacg
gtgttctgtctgagtgtgtttgcgctgatcggactgcagctcttcatggggaacctgcgt
cacaagtgtgtgttctggcccatcaacctcaacgacacctacctgtccaacggcagcaaa
ggcttcgactggaaagagtacatcatgaacgacactaacttctacttcctgccaggccag
ctggacgctctgctctgtggaaacagctctgactcggggcggtgtccagagggcttcacg
tgcatgaaagccggacggaaccccaactatggctacaccagcttcgactcgttcggctgg
gccttcctggccctcttccggctcatgacccaggacttctgggagaacctctaccagctg
accctccgtgcggcggggaagacctacatgatcttcttcgtgctggtgatcttcgtgggc
tccttctacctggtgaacctgatcctggctgtggtggccatggcctacgaggagcagaac
caggccaccatggaggaggcggagcagaaggaggccgagttcaaggccatgctggagcag
ctgaagaagcagcaggaggacgcacaggctgctgccatggcgacgtcggcgggcacggtg
tcggaggacgcgctggtggacggcggtggcggtgagcacgtgtcacgctcctcctccgag
gagtccaagctgagctccaagagcgccaaggagcggcgcaaccgcaagaagaagtcgcgg
cagaaggagcaggagaaggagaagggggacagcgagaaggtggtcaagtccgagtccgac
gacggcagcaagcgcagccgcttccgtttccccgacaaccggctgggccgcaaaacctcc
atcatggatcagtctctgctcagcatccctggctcgcccttcatgtcgcgccacaacagc
cgcagcagcatcttcagcatcaaggggcgcggtggcggcggcggcgggggcaaagacgtg
ggctcggagaacgagtttgcggacgacgagcacagcacggtggaggagagcgaggaccgc
cgcggctccctcttcatcccctaccgccgcaacagctacagcggctacagccagggctcc
tcgcgcctcaacccgctggcgccacacactggcggcaagcggaacagcacggtggactgc
aacggcgtggtctctctgattggccccaagggccccgggcgtctgctgcctgagaccact
gaggtggactgtaagcggaagctctcgggttccctgatggtgtcggtggatcagctcaac
atgtccttcagccgcaaagagcgagccaacagtgccatgaccgtcgtcaccaacacactc
gtcgaggagcttgaagattcccaaagaagttgtccgccatgctggtacaagtttgccaac
acgttcctgatctgggagtgtttcccgctgtgggtgaagatcaaggagatcgtgaacctg
atcgtcatggacccgtttgtggatctggccatcactatctgcatcgtgctcaacacggtg
ttcatggccatggagcactaccccatgaccccacactttgaggaggtgctgtctgtggga
aacctggtgttcacaggtatcttcacggccgagatgtttgccaagctggttgctatggat
ccctactactacttccaggagggctggaacatctttgacggcttcatcgtcagtctgagt
ttggtggagttgggtctggcagatgtggagggtctgtcagtgttgcgatccttcagattg
ttgagagtgttcaagctggccaagtcgtggccgacgctgaacatgctgatcaagatcatc
ggtaactcggtgggcgccctggggaacctgaccctggtgctggccatcatcgtcttcatc
ttcgccgtggtgggcatgcagctgtttggcaagagctacaaggactgcgtgtgcaagatc
gccgtggactgcgtgctgccccgctggcacatgaacgacttcttccactccttcctcatc
gtgttccgcgtgctgtgcggcgagtggatcgagaccatgtgggactgcatggaggtggcc
ggccagaccatgtgtctgaccgtcttcatgatggtgatggtcatcggcaacctggtggtg
ttgaatctgttccttgccttgctgctgagctccttcagcgctgacaacctggccgccacc
gacgacgacggcgagatgaacaacctgcagatctcctgcatccgcatcaagaagggcatc
gcctgggccaaggtgcacatgcgcatcctggtggcgcacgtgctcaagaagaagctggag
gaggacgaggtcaagccgctggacgacatcttcgacgagaaggtcaagtgcatcgccaac
cacacgggcgcggacatcgggcgcggcgacatcctggactaccagaagaacggcaacggc
accaccagcggcatcggcagcagcgtgggcaagtacatgatcgacgaggaccgcatgtcc
ttcatccacaaccccaacctcaccgtgcgcgtgcccatcgccgtgggcgagtccgacttc
gagaacctcaacaccgaggacttcagcagcgagtcggacgtcgagaacagcaaagacctg
gacgacacaagctcgtcggagggcagcactatagacatcaagcctgacgaggacgagatg
gccgtcgtggaggtggtggaagagtatgtggacccagaggcctgctggacagaaggctgc
attgcccgatacaagtgctgcgacgtgcccatcactgagggctggggcaagtactggtgg
ttcctgaggaagacctgctacctgatcgtggagcacaactggtttgagacactcatcatc
ttcatgatcctgctcagtagtggagctctggcctttgaggatgtctacatcgagcagcgt
aagaccatccagatcatcctggagtatgccgaccgcgtgttcacctacatcttcatcctg
gagatgctgctcaagtgggtggcctacggcttcgtcaagtacttcaccaacgcctggtgc
tggctggacttcttcattgtggatgtgtcaatagtcagcctcatagctaatgccctgggc
tactctgacttgggtcccattaagtccttgaggactttgcgggcccttaggcctctgagg
gccctgtcgcggtttgagggcatgagggtggtggtgaacgctctggtgggcgccatcccc
tccatcatgaacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggc
gtcaacctgttcgccggcaagtactactactgctggaacgagacgtcggaggagtacttc
aaaccggacgaggtcaacaaccgcacacagtgctttgagctgatctctttgaaccacacg
gaggtgcgatggaaaaacgtcaagatcaacttcgacaacgtgggggcaggctacctggct
cttctgcaagtggcgaccttcaaaggctggatggacatcatgtacgctgcagtggactcc
agaaaggtggaagaccagcctatgtatgaggacaacatctacatgtacatctactttgtc
atcttcatcatctttggttctttcttcaccctgaacctcttcattggtgtcatcattgac
aatttcaaccagcagaagaaaaagtttggaggtcaggacatcttcatgacagaggagcag
aaaaagtactacaacgccatgaagaagctgggatctaagaagcctcagaagcccattccc
agacctctgaacaacttccagggcaaggtgtttgactttgtgacgcagcaagtgttcgac
atctccatcatgatcttgatttgcctcaacatggtgaccatgatggtggagacagacgac
cagtcggaggagacggaggagaccctctactgggtcaatttcgtcttcatcgtcgtcttc
acctcagagtttgtgctcaagctgtttgctctgagacattactacttcaccaacggctgg
aacgtctttgattgtgttgtggtcatcctctctatcgtgggtatgttcctggcggacctg
attgagaagtactttgtgtcgccgacgctgttcagggtgatccgtctggcgcgtatcggc
cgtatcctgcgtctcatcaaaggagccaaaggcatccgaactctgctctttgccttgatg
atgtcacttcctgccctgttcaacatcgggctcctgctgttcctggtcatgttcatcttc
tccatcttcggcatgtccaacttcgcctacgtcaagcgagagctggggatcgacgacatg
tacaactttgagacgttcggcaactccatgatcatcctattcatgatcaccacgtcagcc
gggtgggatggactcctggccccgatcctgaactacgaccccgactgcaacccccgcaag
gagaaccccggcacgacggtgcgagggaactgcgggaacccctcggtgggcatcttcttc
ttcgtcatgtacatcatcgtgtccttcctcatcgtggtcaacatgtacatcgccatcatc
ctggagaacttcagcgtggccacggaggagagcgccgacccgctctgcgaggacgacttc
gagtccttctacgagatctgggagaagttcgacccggacgcgtgccagttcatcaccttc
gccaagctgcccgacttcgccgacaccctggagcacccgctgcgtgtgcccaagcccaac
atcatcgagctcatcgccatggacctgcccatggtcagcggcgaccgcatccactgcctg
gacatcctgttcgccttcaccaagcgcgtgctgggcgacagcggcgacctggacatgatg
cggcagcagatggaggagcgcttcgtggcggccaacccgtccaaggtgtcgtacgagccc
atcaccaccacgctgcgccgcaagcaggaggaggtgtcggccgtggtcatccagcgcgcc
taccgcggacacctggcgcgctccggcttcatctgcaagagacgccggcccgccaacaac
aagctggagaacggagagaccaatcaggagaagaaggagaacacgccctccaccgcgtcg
ctgccctcgtacgacagcgtcaccaagcccgagaaggacaagaaggacgacaacgagggc
aaagggcgcaaggataagggccgaaaccaaaaagaagtcagggagtccaagtgttag
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