Sardina pilchardus (sardine): 134092583
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Entry
134092583 CDS
T10667
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134092583
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
spil03310
]
134092583
Transcription factors [BR:
spil03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134092583
Nuclear receptors [BR:
spil03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
134092583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
DUF4746
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
134092583
NCBI-ProteinID:
XP_062401543
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Position
9:complement(7509297..7570056)
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AA seq
507 aa
AA seq
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MATNRERPVGHMTGFYPFAFSSMRNHTPFDLLANSSLFGRFGADLPKEMAALSVETQSTS
SEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRD
KNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDIKEEVVIPESYELSGELEE
LVNKVSKAHQETFPSLGQLGKYTTNSSADTRVQLDLGLWDKFSELSTKCIIKIVEFAKRL
PGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLT
DLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPERVDRLQEPLLEALKLYARRR
RPNKPHMFPRMLMKVTDLRGISTKGAERAVTLKTEIPGPMPPLIREMLENPEVFEEAAAE
AAKAAAESASAASTAEASASASASTQPPPAIQAIKREREEEESTLEEEDDDEDYGDEERE
RGGDSEDEAWGLTPPDPTRKGATGRAQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacagggagcggcccgtgggtcacatgacggggttctacccgttcgctttc
agctccatgcggaaccacaccccctttgacctgctggccaatagcagcctgtttggacga
ttcggggcggacctccccaaagagatggcagcactttcggtggagacgcagagcaccagc
tcagaggagatggtccccagctccccctcccctcccccgccacctcgcatctacaagccg
tgcttcgtgtgccaggacaaatcctccggctaccattatggggtcagctcctgcgaggga
tgcaagggcttcttccggcgcagcatccagaagaacatggtgtacacctgccaccgagac
aagaactgccagatcaacaaggtgacgcgcaaccgctgccagtactgccggctgcagaag
tgcttcgaggtcggcatgtccaaagaagctgtgaggaatgacaggaacaagaagaagaag
gacattaaggaggaggtggtgattccggagagctacgagctgagtggagagctggaggag
ctggtcaacaaagtcagcaaggctcaccaggagaccttcccctcactcggccagctgggc
aaatacactactaactccagtgctgacacccgagtgcagctggatctggggctgtgggac
aagttcagtgagctctccaccaagtgcatcatcaagatcgtggagttcgccaaacgcctg
cccggattcaccaccctcaccatcgctgaccaaatcaccctgctcaaatcagcatgccta
gatatcctgatgctgcgtatctgcacgcgctacactccagagcaggacaccatgaccttc
tcagatgggctgacgctcaaccgcacacaaatgcacaacgccggcttcggccccctcact
gacctggtgtttgccttcgccgggcaactgctgcccctggagatggacgacacagaaaca
ggcctcctcagtgccatctgcctgatctgtggagaccgtatggacctggaggagccggag
cgcgtcgaccggctgcaagaaccgctgctagaggcgctgaagctgtacgcacgccgccgt
cgccccaacaagccccacatgttcccacgcatgctcatgaaggtcaccgacctcagaggc
atcagcaccaaaggagccgagcgagccgtcacgctgaagacggagatccccggccccatg
ccgcctctgatccgcgagatgctggagaaccccgaggtgttcgaggaggccgccgccgag
gccgccaaggccgctgccgagagtgccagcgcggcctccaccgccgaggcctcggcctcc
gcctccgcctccacccagccaccgcccgccatccaggccatcaagcgcgagcgcgaggaa
gaggagtcgaccctggaggaagaggacgacgacgaagactacggggacgaggagagagag
cgaggaggggacagcgaggacgaggcctggggcctcacgccgcccgaccccacgaggaaa
ggcgccaccggccgcgcccagtga
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