Sardina pilchardus (sardine): 134092628
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Entry
134092628 CDS
T10667
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04110
Cell cycle
spil04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134092628 (smc3)
04114 Oocyte meiosis
134092628 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134092628 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
spil00535
]
134092628 (smc3)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
134092628 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
134092628 (smc3)
Proteoglycans [BR:
spil00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
134092628 (smc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
134092628
NCBI-ProteinID:
XP_062401630
LinkDB
All DBs
Position
1:complement(44292318..44317622)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKLRRALEYTIYNQELNETRAKLD
ELSTKRETCGDKSRQLRDAQQDARDKVEETERVVRELKAKVAAMKEEKEQLSSERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEREEK
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNVEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYSTNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSS
RGALTGGYYDTRKSRLELQKDMRRAEEELSELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLAQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRIKDTLARSDDLDGLIDKTEVEIKDHIKS
MDRWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGTDSEKG
TTSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ISAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggtcattatccaggggttccgaagttacagggatcagactgtggtt
gaccctttcagcccaaagcataatgtcatcgttggcagaaatggatctggcaaaagtaat
ttcttctatgccattcagtttgtgctcagtgatgagttcagccacctccgtcccgagcag
cgtctggccctgctccacgaagggactggccctcgtgttatctcggcttttgtggagatt
atatttgacaattctgacaacaggctgccgatcgacaaagaagaggtgtccctccggcgt
gtcattggggccaagaaggaccagtatttcttagacaagaaaatggtgactaagaacgat
gtgatgaacctgctggagagtgctggcttctcccgtagcaacccctactacatcgtcaag
cagggcaagatcaaccagatggctactgcccctgactcccagcgtctgaagctgctccga
gaggtggccggtaccagggtctacgatgagcgcaaggaggagagtatctcactcatgaag
gagacagagggcaagagggagaagatcaacgagctgctgaagtacatcgaggagcgcctg
cacacgctggaggacgagaaggaggagctggcccagtaccagaagtgggacaagctgcgc
cgcgcgctcgagtacaccatctacaaccaggagctcaacgagacgcgcgccaagctggac
gagttgtccaccaagagggagacctgtggagacaagtccaggcagctgcgagacgcccag
caggatgccagagacaaagtcgaggagacggagcgcgtggtgcgcgagctgaaggccaag
gtggcggccatgaaggaggagaaggagcagctgagctcggagcggcaggagcagatcaag
cagcgcaccaagctggagctcaaggccaaggacctgcaggacgagctcgccggcaacagc
gagcagaggaaacgtctgctgaaggagcgtcagaagctgctggagaagatcgaggagaag
cagaaggagctgcaggagaccgagcccaagttcaacaccgtcaaggagcgcgaggagaag
ggcatcgccaggttggcccaggccacccaggagcggacggacctgtacgccaagcagggc
cgcggcagccagttcacctccaaggaggagagggacaagtggatcaagaaggagctcaag
tccctggaccaggccatcaacgacaagaagcgccagatcgccgccatccacaaagacctg
gaggacaccgaggccaacaaggagaagaacgtggagcagtacaacaagttggatcaggat
ctgaatgaggtgaagacccgcgtggaggagttggacaagaagtactacgaggtgaagaac
cgcaaggatgaactgcagagcgagagaaactacctgtggagagaggagaatgctgagcag
caggccctggctgccaaaagggaggacctggagaagaaacagcagctgctccgtgccgcc
accggcaaggccatcctcaacggcatcgacagcatcaacaaggtgctggagcacttccgc
cgcaaaggcatcaaccagcacgtcatcaacggttaccacggcatcgtcatgaacaacttt
gagtgtgagccagcgttctacacctgtgtggaggttacagccggaaccagattgttctac
cacatcgtggagacggacgaggtgagcaccaagatcctcatggagttcaacaagatgaac
ctgccgggagaggtcaccttcctgcccctcaccaagctggacgtgcgcgacactgcctac
ccagagaccaacgatgccatcccgatgatcagcaagctgcgctacagcaccaactttgac
aaggccttcaagcatgtgttcggcaagaccctcatctgccgcagcatggaggtgtccact
cagctggccagggccttcaccatggactgcatcactctggagggtgaccaggtgagtagc
agaggtgcgctgacgggcggttactacgacacgaggaagtcgcgtctggagctgcagaag
gacatgaggagagccgaggaggagctgagcgagctggaggccaaactcaacgagaacctg
cgccgcaacatcgaacgcatcaacaacgagatcgaccagctgatgaaccagatgcagcag
atcgagacccagcagaggaagttcaaggcgtcgcgcgacagcatcctgtccgagatgaag
atgctgaaggagaaacgccagcagtccgagaagaccttcatgccaaagcaacgcagtctg
cagagtctggaggccagcctgcacgccatggagtccacgcgggagtcgctgaaggccgag
ctgggcaccgacctgctggcgcagctcagcctggaggaccagcgccgcgtcgacgacctc
aacgacgagatccgccagctgcagcaggataacagacagctgctgaatgagaggattaag
ctggagggcatcatgaccagggtggagacgtacctgaacgagaacctgcggaagcgtctg
gaccaagtggagcaggagctgaatgagctgcgggagactgagggaggcactgtgctcaca
gccaccacctctgagctggacggcatcaacaagcgcatcaaggacaccttggcccgctcg
gatgacttggacggcctgattgacaagacggaggtggagatcaaggaccacatcaagagc
atggaccgctggaagaacatcgagaaggagcagaacgacgccatcaaccacgacaccaag
gagctggagaagatgaccaaccggcagggcatgctgctgaagaagaaggaggagtgcatg
aagaagatccgcgagctgggctccctgccgcaggaggccttcgagaagtaccagacgctc
acgctcaaacagctcttccgtaagctggagcagtgcaacaccgagctgaagaagtacagc
cacgtcaacaagaaggccctggaccagtttgtcaacttctccgagcagaaggagaagctg
atcaagcgacaggacgagctcgaccgcggctacaagtccatcatggagctcatgaacgtg
ctcgagctgcgcaaatacgaggccatccagctcaccttcaagcaggtgtctaagaacttc
agcgaggtgttccagaagctggtgcccggcggcaaagccacgctggtgatgaagaagggc
gacgctgagggcagccagtcgcaggatgagggcgagggcggcaccgacagcgagaagggc
accacctcccagagcagcgtgccctcggtcgaccagttcaccggagtgggcatcagggtg
tcgttcacagggaagcagggtgagatgagggagatgcagcagctctctggaggtcagaag
tccctggtggctctggctctcatcttcgccatccagaagtgcgacccggcgccgttctac
ctgtttgacgagatcgaccaggcgctggacgcccagcacaggaaggccgtgtcagacatg
attgtggagctggccggccacgcccagttcatcaccaccaccttcaggcccgagctgctg
gagtcggccgacaagttctacggcgtcaagttcaggaacaaggtgagtcacattgatgtg
atctcggcagagcaggccaaggactttgtggaggatgacaccactcacggctga
DBGET
integrated database retrieval system
