Sardina pilchardus (sardine): 134092723
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Entry
134092723 CDS
T10667
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spil03009
]
134092723 (shq1)
Ribosome biogenesis [BR:
spil03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
134092723 (shq1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PRP21_like_P
CIS_TMP
PRDM2_PR
Motif
Other DBs
NCBI-GeneID:
134092723
NCBI-ProteinID:
XP_062401748
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All DBs
Position
9:complement(11153480..11192162)
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AA seq
676 aa
AA seq
DB search
MLTPAFELSQDSDFLTLMVRVPYTRTSEFDLCIDGEDFKFYAKPYFLRLTLPGRIVEDGR
EKASFDIDKGVFTLRVPKETAGQHFEGLQMLTSLLAPKGIRSAKPLVEDMEPCVGSAGAG
LEEEEEEDEEEFDWQVEQAVYTERSEEELNQLQKYGFGNLRCGVFARLQEELSDVIDVKD
PDSTTPAARRRGRQAAEHNKFDPDHYLADLFEDEAIQSLLRFGPWWGEASSEQSQHSPAS
VEFSEEDKEQMRKLTNRSYLLDKSTRQHAWLSLVDIILAYAYEIRVTEGEHSVESPWNIR
KLSGTLSWLETYHSLQDVLVSFGRRALSYPLYRHFSLVTSAVRDAARIFQAGKACVLKCL
LDVHKIFRENDPAYILNDLYITDYCVWIQKVKSKHVNSLAEPLQKANLKKEDLGLELEEL
EAAAALVEREEEEEEEEEEDGSSSGEESDSSDDSSSSSSSSSSSSEDSDDCQAPEEPGAL
CVLVNSGSVAGKKKNHGSSSSSSSSGPLQQPQPAPVKSPALTPSPAPGLPPRGAPDHAGS
SSSSSSHSPAQLIEELGERLGEGLRISPARPEGTPPSSSSPSSSSSSSSSSSASASNVEQ
PERQSARVGEGERMNGSQPAHTRLPGAERRHAPPAEAAKARGTLLTARPHRNPLVIVDAE
ELDSDDEEVEDCSPGL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccccagcgtttgagctgagtcaggactcggacttccttacgctaatggtccgt
gtgccctacaccaggacctcagagtttgacctgtgcattgacggggaagacttcaagttc
tatgccaagccatactttcttcggttgaccttacctggcagaattgtagaggatggaaga
gagaaagcatcattcgatattgataaaggtgtcttcacgctgcgcgtgcccaaagagacg
gcgggccagcactttgagggactgcagatgctgacgagcctgctggcacccaagggcatc
cgctctgccaagcccctggtggaggatatggagccctgtgtggggagtgcaggtgctgga
ctggaggaggaggaagaggaggacgaggaagagtttgattggcaggtggagcaggccgtg
tacaccgagcgttccgaggaggagctgaaccagctgcaaaagtacggctttggcaacctc
aggtgcggggtcttcgcccgactgcaggaggagctgagcgatgtcattgatgtgaaagat
ccagacagcaccacaccggcggcaaggagacgtggccgccaagccgccgagcacaacaag
ttcgacccggaccattatctggcggacctgtttgaggacgaggcaatccagagtctgctg
aggttcgggccgtggtggggagaggcgagctcggagcagtcccaacacagccctgcatcc
gtagagttctcggaggaggacaaggagcagatgaggaagttgaccaaccgctcgtacctg
ctggacaagtccacgcggcagcatgcgtggctcagcctggtggacatcatcctggcctac
gcctacgagatccgcgtcaccgagggagagcacagcgtggagtcgccgtggaacatccgt
aagctcagcgggaccttgagctggctggagacgtatcactctctgcaggacgtgctggtg
tcgtttggcaggagagcgctgtcctaccccctctaccgccacttctccctggtcacctcg
gcagtacgggacgctgcgcggatcttccaggcaggcaaggcctgtgtcctgaaatgcctg
ttggacgtccacaagatcttccgagagaacgatcccgcctacatcctcaacgacctctac
atcaccgactattgcgtctggatccagaaagtcaagtccaagcatgtaaactccctggcg
gagcctctacagaaagccaatctgaagaaggaagatctgggattggagctggaggagctg
gaggcggcggcagcgctggtggagagagaggaggaagaggaggaggaggaggaggaggat
gggtcgtcgagcggagaggagtcagacagcagcgacgacagcagcagcagcagcagcagt
agcagcagctcgtcggaggacagcgacgactgtcaggcgccagaggagcccggcgctctg
tgtgtgctggtgaactcaggtagcgtcgcagggaagaagaagaaccacggcagcagcagc
agcagcagcagcagcggccccctccagcagccccagcctgccccagtgaagagcccagcc
ctgaccccgtccccagcccccggcctccctccccgcggagctccagaccacgccggcagc
agcagcagcagcagcagccacagccctgcacagctgatcgaagagctgggagagcggctg
ggggaggggttgagaatctctccggcacggccggagggaacgcctccctcctcctcctcc
ccctcttcctcctcctcctcctcctcctcctcgtccgcctctgccagcaatgtggagcag
ccagagcggcagagcgcgagagtgggggagggggagcgcatgaacgggagccagccggcg
cacacacgtctgccgggcgccgagcggagacacgctccgccggccgaggctgccaaagcc
cgggggacgctcctgaccgcgcgtccgcaccggaacccgctggtcatcgtcgacgcggag
gaactggacagcgacgacgaggaggtcgaggactgctcgcccggtctctga
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