Sardina pilchardus (sardine): 134092812
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Entry
134092812 CDS
T10667
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134092812 (tmf1)
Membrane trafficking [BR:
spil04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
134092812 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
134092812
NCBI-ProteinID:
XP_062401883
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All DBs
Position
9:complement(15086800..15097503)
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AA seq
1153 aa
AA seq
DB search
MSWFNASQLSSFAKQALTTAQKSIDRVLDIKEDDPWGDTVVATYDDLPGKPVSAGGWGMN
QWDTPVEECTKTSPPSSEAITTPVTRTVVDETETFFSAFLSSGDLPTVMSSQVVSVPPIK
SSRGGPQEETEKEDTDEVDSPQQGEAAEDQQDSEGYAEVDMDVDLDNESVYAEPRSSSAG
PDVVLLELEPAVSVDLTVPEQTPTSEDQTVLDNTEVAASEAAPDEPQSSPESELAVDHLE
SPEAPEPKSPSKASLAPPKEILLESKDAKGEDRQSDTPSPPVSAFSSGTSTTSDIEVLDH
ESVLSESSASSRQETAEAKAGLHLMQGSFQLLSASACADYPRLGEDYPKLTESCGSSSDA
FERIDSFSVQSLDSRSVSEVNSDDELPGGRTLASVTSPSSHTPPASLLVPAPKKEDGEEE
DEGEERRHDETMTEQSLDEAETEMESEMEESARSATPVNCEQPEEEPESDVTLSGLSMDA
SEPRTPPITEEMRGASTSQILELQKIIDDLTSRLETRETQLLSVSKDKARLEEDCDNLKD
EIIGLREETTTVQSLQDEFTHRIAEAERKAQLACKERDIAKKEIKGLREELASRFNSNET
LELIRDKEEQIRGLLEEGEKLSKQQLQHCNIIKKLRVKEKDSDLKITKQTKQLKEQEEEL
KHLQQVLDGKEEVEKQHRENIKKLNVVVERQERESTQVQSELEEFLEKNRSLQAALDNSY
KELAELHKANASKDSVAQELALSHQEQAREELERALERATEEARMQQEALANQVADLRLA
LQRAEQQQARKEDYLREEISELQQRLQAAETRNQELSQSVTSATRPLLRQIENLQASLGG
QTESWEKLEKSISDRLVDAEAQLAVAVEKERAATDELHGLRAQVASLESQSSLLRQEKGR
LQGLLEAEKSRRERLEDDISREHVELENLRGEHSRALEEAKKEKLLMTNQLEMEKMKVEQ
EKKKCYLAQEALKEKERKAMVMSVSEPPASSPSLSRSSSISGPDHAGLHSSLLAQQEDTL
DHSFGSMSISGSNLYEVARLGGGSSIMENLQSQLKLREGEIAQLQLEIASLERSRAVMAE
ELVRLTNQNDELDEKVTEIPRLRIHLKDLEQRHNTILQMYGEKAEEAEELRLDLEDVKNM
YKTQIDELLKNQK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtttaacgcgtcgcagctgtccagttttgctaaacaggcgctgacaacagca
cagaagtctatcgatcgtgtgttggacattaaagaagacgatccatggggtgatacggtc
gtcgctacgtatgatgatttacctggcaaacctgtctcagcgggagggtgggggatgaac
cagtgggacacccccgttgaggaatgcaccaagacttcccctccctcatccgaggccatc
accaccccggtgactcgcacggtggtggacgagacggagacgttcttcagtgccttcctc
tcttcaggagatctgccgactgtcatgagctcacaggtggtgtccgtccctccaattaaa
tcgagccgaggaggaccacaggaggagacggaaaaggaagacactgacgaagtggactcc
ccacagcaaggcgaagccgcagaggatcagcaggacagtgagggatatgccgaggtggac
atggacgttgacttggacaatgagtcggtttatgcagagcctagaagttcatccgcgggc
cccgatgtggttttgctggagctggaaccagccgtctctgtcgatttgactgtgccagag
caaacacctaccagcgaagaccagacagtgcttgacaatacagaggtggcagcaagcgaa
gcggcaccagacgagcctcagagcagccctgagtccgagctggccgtggatcacctggag
tcgcccgaagccccagagcccaagagcccctctaaagcctcactagcgccccctaaggag
atcttactggagtctaaagacgccaagggggaggaccggcagagtgacaccccgtcgccg
ccggtcagcgctttctcgtcgggcacgtccaccaccagcgacatcgaggtgctggaccac
gagagcgtgctgagcgagagctcggccagctcgcgccaggagacggcggaggccaaagcg
ggcctgcacctcatgcagggctccttccagctgctgagcgcgtcggcctgcgccgactac
ccgcgcctcggggaggactaccccaagctgacggagagctgcggctcgtcgtcggacgcc
ttcgagcgcatcgactccttcagcgtgcagtcgctggacagccgcagcgtcagcgaggtg
aactcggacgacgagctcccgggcggccgcacgctggcctcggtcacgtcgccgtcgtcg
cacacgccccccgcctccctcctggtcccggcgccgaagaaggaggacggagaggaggaa
gacgagggagaggagcgcaggcacgacgaaacgatgaccgagcagtccctggacgaggcg
gagacggagatggagagcgagatggaggagagcgcccgcagtgccacgccggtgaactgc
gagcagcctgaggaggagccggagtccgacgtcacgctgtcgggcctgagcatggacgct
agtgagcccaggacgccgcccatcacggaggagatgagaggagcctccacctctcagatc
ctggagctgcagaagatcattgacgacctcacaagcagacttgaaacaagggagacacag
ctgttgtcagtcagtaaagacaaggccagactggaagaggattgtgacaaccttaaagat
gagataatcggcttacgggaggaaacaactactgtccaatctcttcaagatgaattcaca
caccgcattgctgaagctgagaggaaagcccagctggcctgtaaagagagagacattgcc
aagaaggaaataaaaggcctaagagaggagctggcgtccaggttcaactccaatgagacc
ctggaactgatcagagacaaggaagaacagatcagaggccttctggaggaaggtgagaag
ttgtcgaagcagcagttgcagcattgcaacatcatcaagaagctgcgtgtgaaggagaag
gacagtgacttgaaaatcactaaacagaccaagcaactgaaggagcaggaagaggaactt
aaacacctacaacaggttctagacggcaaagaagaggtagagaagcagcacagggagaac
atcaagaagctgaacgtggtggtggagcggcaggagcgcgagtccacccaggtgcagagc
gaactggaggagttcctggagaagaaccgcagtctccaggcagcgctggacaactcctac
aaggagcttgcagagctgcacaaggccaacgcctccaaggacagcgtggcccaggagctg
gcgctcagccaccaggagcaggccagagaggagctggagcgcgcactggagcgcgccacc
gaggaggcccgcatgcagcaggaggccctggccaaccaggtggcagatctgcggctggcg
ctgcagagagctgagcagcagcaggccaggaaggaggactacctcagggaggagatcagc
gagctgcagcagagactgcaagcagccgagaccaggaaccaggaactgagtcagagtgtc
acctcagccacgcggcccctccttcgtcagattgaaaacctgcaggcctcgcttggcggc
caaacggaatcgtgggagaagctggagaagagcatctctgataggctggtggacgcagag
gctcagctcgccgtagcagtggagaaggaacgtgccgcgacggacgagctgcatggcctc
agagctcaagtggcctcgctggagtcccagagttccctcctgcgtcaggagaagggccgt
ctacagggcctcctggaggcggagaagagccggagggagaggctagaggacgacatcagc
agggagcatgtggagttggagaatctgaggggagagcactcgcgggctctggaagaggcc
aagaaagagaagttgctaatgaccaatcagctggagatggagaagatgaaggttgagcag
gagaagaagaaatgctaccttgcgcaggaggccctcaaggagaaggagaggaaggccatg
gtgatgtctgtgagcgagcctccggcatcgtccccgtcgttgtcccgctccagctccatc
agcgggccggaccacgccggcctccactcctcgttgctggctcagcaggaggacactctg
gaccactcctttggttccatgtccatcagcgggagcaacctgtatgaagtggctcgactc
ggaggaggctccagcatcatggagaacctgcagtcacagctcaaactcagagaaggcgag
attgcacagcttcagttggagatagccagtcttgagaggagccgtgctgtgatggcagag
gagctggtccggctgaccaatcagaacgatgagttagacgagaaagtgacagagattccc
aggttacggattcatctcaaggatctagagcagaggcacaacaccattttgcagatgtac
ggtgagaaggcagaagaggctgaagaattgcgtctggacctggaggatgtgaagaacatg
tacaaaacccagatcgacgagctgctgaaaaatcaaaaatag
DBGET
integrated database retrieval system
