KEGG   Sardina pilchardus (sardine): 134092841
Entry
134092841         CDS       T10667                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil04137  Mitophagy - animal
spil04144  Endocytosis
spil04145  Phagosome
spil04148  Efferocytosis
spil05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:spil00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    134092841
   04145 Phagosome
    134092841
   04137 Mitophagy - animal
    134092841
   04148 Efferocytosis
    134092841
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    134092841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spil04131]
    134092841
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spil04147]
    134092841
   04031 GTP-binding proteins [BR:spil04031]
    134092841
Membrane trafficking [BR:spil04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    134092841
 Endosome - Lysosome transport
    134092841
Exosome [BR:spil04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134092841
  Exosomal proteins of other body fluids (saliva and urine)
   134092841
  Exosomal proteins of colorectal cancer cells
   134092841
  Exosomal proteins of melanoma cells
   134092841
GTP-binding proteins [BR:spil04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    134092841
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 134092841
NCBI-ProteinID: XP_062401936
LinkDB
Position
9:15686642..15691382
AA seq 217 aa
MAARPVRPNGQSPASKVCQFKLVLLGESAVGKSSLVLRFVKGQFQEFQESTIGAAFLTQT
VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDMTNTDTFGRAKTWVSELQRQ
ASPNIVIALAGNKADLSANRTVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFMAIAKKL
PKSEPPAGPGAAGTGRAGRGVDLNQPTQTSRTQCCGN
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcagcacgtcccgttcggccaaacggccagtctcctgccagcaaggtctgccagttt
aagctggtgctgcttggggagtcggcagttggaaaatccagcctggtcctgcgctttgtg
aaaggacaattccaggagtttcaggagagcaccattggagctgctttcctgacacagaca
gtttgtttggatgacaccacagtgaagtttgagatctgggacacggcaggacaggagaga
taccacagcctggcacccatgtactacagaggagcacaggctgccattgtggtgtacgac
atgaccaacacagatacatttggtcgggcaaagacctgggttagtgaactgcagaggcag
gcgagcccaaacattgtgattgccctggctggaaataaagccgacctatctgccaaccgg
accgtggagtacgaggaggcgcaggcctatgcagatgataatagcctgctgttcatggag
acctctgccaaaactgcaatgaacgtcaatgacctcttcatggccatagctaagaagctg
ccaaagagtgaacctccggcagggccaggagctgctgggacgggccgtgcaggccgagga
gtggacctcaaccagcccactcagaccagcaggactcagtgctgtgggaactaa

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