Sardina pilchardus (sardine): 134092978
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Entry
134092978 CDS
T10667
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134092978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spil02000
]
134092978
Transporters [BR:
spil02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134092978
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134092978
NCBI-ProteinID:
XP_062402175
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Position
9:complement(19370221..19407935)
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AA seq
595 aa
AA seq
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MEKQQEPPSNQPVRGQWANKMEFLLAVAGQIIGLGNVWRFPYLCYKNGGGVFFIPYVLFL
FSCGIPLFLLETSLGQYTSQGSVTCWRKICPLFEGLGYGNQVVVLYSSIYYIVILAWAFF
YLFSSFTPELPWASCQNPWNTENCMEFDKTRGLLNLTIFENATSPVKEFWERRVLNITDN
VYEMGSMRWELVLCLLLSWIICYFCVWKGVKSTGKVVYFTATFPYVMLVVLLVRGLTLPG
AADGIKFYLYPDPARLADPQVWMDAGTQIFYSYAICIGCLTALGSYNKYDNNCYKDCVWL
CLLNSATSFVAGFAIFSVLGFMAYEQKTNISMVAESGPGLAFIAYPRAVAMMPLPQLWAI
CFFIMIILLGLDSEFVGLEALMTAITDMFPHFFHTGKHRRKILLLIISIASFLIGLVMVT
EGGLYIFQLFDYYACSGMTLLLFALFQSVCIGWIYGADHLYDNIEDMIGYRPLPLIKYCW
KYVTPVVCSSTFVFSLVKYSPLKFNNTTEYPWWGYAIGWWFTLSSTLLVPLWMIYAIIST
PGSLRQRLQTLCTPSRDLRNRTQKNAIHCPQDPECRVPFQNSETVWNKFKDTGPL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcagcaagagcctccatccaaccaaccagtgcgcggccaatgggccaacaaa
atggaatttctcctagcagtggccggccagatcattggcttgggtaatgtgtggaggttt
ccatacttgtgttacaaaaatggaggaggggtgttcttcattccttatgtgctgttcctg
ttttcctgtggcatcccactctttctgttggagacctctctggggcagtacacgagccag
ggatcagtcacttgctggcgaaagatatgccctctttttgaaggtctgggctatggaaac
caagttgtggttttgtactccagcatctattacatcgtcattctggcctgggcattcttc
tatctattctcctccttcacacctgagttgccctgggcaagctgtcaaaacccctggaac
acagagaactgtatggagtttgacaaaaccagaggcctactcaacttaaccatttttgaa
aatgcaacatcgccggtgaaagaattttgggagcgaagggttctgaatatcacagacaat
gtgtatgagatgggcagtatgagatgggagttagtcctgtgtcttcttctgtcatggata
atttgctacttctgtgtgtggaaaggagtcaagtccacaggaaaggtggtgtacttcaca
gctaccttcccctacgtcatgctggtggtgctgctggtccgggggctcacactgcccggg
gcagcggatggcatcaagttctacctctatcccgatccagcacgcctggctgaccctcag
gtgtggatggacgctggcacacagattttctattcttatgccatttgcattggatgcttg
actgcgctgggcagttacaataagtacgacaacaactgttacaaagattgtgtgtggctg
tgtctattaaacagcgcgaccagttttgtggctggttttgccattttctctgtattgggg
ttcatggcttatgagcaaaaaacaaatatctcaatggtagcagaatcaggtccgggcttg
gcattcattgcctaccctcgagccgtcgctatgatgcctttacctcaactctgggccata
tgtttcttcatcatgatcattttgcttgggctggacagtgagtttgtaggcctggaggct
ttgatgaccgccatcacagatatgtttccccacttcttccacacgggcaagcacagacgc
aagatccttctgctcatcatcagtatagcgagcttcctcattggcttagtgatggtcact
gagggtgggctgtatattttccagcttttcgactactatgcctgcagtggaatgactttg
ttattgtttgctttgttccagtctgtatgtattggatggatttatggtgctgaccacctg
tatgacaatatagaggatatgattggatatcggcctctccctctgataaagtattgttgg
aaatatgtcacaccagtagtctgctctagtacatttgtgttctccctcgtcaaatacagt
cctctgaagttcaacaacactactgaatacccatggtggggttacgctattggttggtgg
ttcactctttcatctacattgcttgtgcccctttggatgatatatgcaattatttctact
cctggaagtctacgacagaggcttcagacactgtgcactccatctcgagaccttcgaaac
cggacccaaaagaacgccatccactgtcctcaggaccccgagtgtagggttccattccag
aattcagagacagtctggaacaagttcaaagacactggccctctttag
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