Sardina pilchardus (sardine): 134093012
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Entry
134093012 CDS
T10667
Symbol
sema3fa
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa isoform X1
KO
K06840
semaphorin 3
Organism
spil Sardina pilchardus (sardine)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
ig
I-set
Ig_6
Ig_2
V-set
PSI
DUF4799
Ig_5
Motif
Other DBs
NCBI-GeneID:
134093012
NCBI-ProteinID:
XP_062402239
LinkDB
All DBs
Position
9:20449484..20498223
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AA seq
839 aa
AA seq
DB search
MSPFGWLVLETLTVFLLVTHPSHSNPLSAPRVFLSFKELRSTGTAHHFSFLLNSTDYRIL
CMDEDHDRMYVGSKDYILSLDLHDINKEPLIIHWPVNPQRKTECILSGKDTNGECGNFIR
LIEPWNRTHLYVCGTGAYNPVCTYVDRGRRSQTLFSEQAARAGGRTSRAAAADADTTAEP
TVPKEYIFRLEPGKVDSGKGKCPYDPKLNSVSSLINGQLYTGLYIDFMGTDSAIFRTMGK
HTTMRTDQYNSRWLHDPTFIHAQLIPDSAEKNDDKLYFFFREKATDMGQSPVTQSRIGRI
CLNDDGGHCCLVNKWSTFLKARLICSVPGVDGVETHFDELRDVFIQKTQDTKNPVIYGVF
SVSGSVFKGSAVCVYSMADVRMVFNGPFAHKEGPNYQWVAYTGKIPYPRPGTCPGGTFTP
SLKSTKDYPDEVINFMRNHPTMYNAVYPVHKRPLVVRTNVDYEFTTITVDQVAAADGNYE
VLFLGTDRGTIQKVIVLPSDDLQTEELVLEEVEVFRVPTPITSMKISPKRQQLYVGSPAG
VTHLVLHRCDVYGEACADCCLARDPYCAWDGKSCSRYSASQKRSDPSRRSRRQDVKYGNP
IRQCRGYNSNANKNTLETVQYGVEGSTAFLECQARSPHVSIKWHLQKENSDRKKELRCDG
RVVRTEQGLLLRSLQMSDSGVYQCTSTENNFKHTLVKLQLVVLSSRTANAALAESHHQHP
QQTAVAGPAAGPQAPALTHPPGSSAWTPTAEQYKDLLTLLSQPEMSLINQYCQDYWQHGE
PHPLVSGPQSGLVGAGGGGGGGGGGGGAVKRKELKELREQRKPRNRRHHEGQSAVATET
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgtttggatggttggtcctggagaccttgacggtcttcttgctagtgacccac
ccctcacacagcaaccccctttcagctcccagagtttttctgtccttcaaagagctccga
tcaaccggcacggcacaccacttctccttcctgctcaactccaccgactaccgcatcctg
tgcatggacgaggaccacgaccgcatgtacgtgggcagcaaggactacatcctgtccctg
gacctgcatgacatcaacaaggagcccctcataattcactggcctgttaatccacaaagg
aagacagagtgcattctgtctggcaaagacaccaatggggagtgtggaaacttcatccga
ctgatcgagccatggaacaggacccacctgtatgtgtgtgggactggagcctacaatccc
gtctgcacttacgttgaccgcggtcgaaggtcacagactctgttcagcgagcaggcggcc
agggcagggggcaggaccagccgagcggccgcggccgacgccgacaccaccgccgaaccc
accgtgccaaaggaatacattttccgtttggagcctggcaaggtggattctgggaagggg
aaatgtccatatgaccctaaactcaatagtgtctcctcccttatcaacggacagctctac
acaggcctctacattgacttcatgggcacagactcagccatcttccgcactatgggcaaa
cacaccaccatgcgcaccgaccagtacaactcccgctggctgcacgatcctaccttcatc
catgcccagctcatccctgacagcgcggagaagaatgatgacaagctctacttctttttc
cgggagaaggccactgacatgggccagagtccggtcactcagtctcgcatcggcaggatc
tgcctgaacgacgacggaggccactgctgcctggtgaacaagtggagcacgttcctcaag
gcgcggctgatctgctcggttccgggagtcgacggggtcgagacccacttcgacgagctg
agggacgtgtttatccagaagacccaggacaccaagaaccccgtcatctatggagtattc
tctgtctctgggtctgtgttcaagggctccgccgtgtgtgtctactccatggcggatgtg
cgcatggtgttcaatgggccctttgctcacaaagagggaccaaactaccagtgggtcgcc
tacacaggaaagataccataccctcgaccaggaacatgcccaggagggacgttcaccccc
tcgcttaagtccaccaaagactacccggacgaggtcatcaactttatgcgtaaccacccc
accatgtacaacgccgtgtacccggtgcacaagcgccctcttgtggtcaggaccaacgtg
gactacgagttcaccacgatcaccgtggatcaggtggccgccgccgacggcaactacgaa
gtgctgttcctggggacggacagaggaaccattcagaaggtgattgtccttcccagcgat
gacctgcagacagaggaattagtacttgaggaagtggaggtcttcagagttccaacacca
ataacaagcatgaagatttctcccaaaaggcaacagctgtacgtgggctcgcccgccggc
gtcacccacctggtgctgcaccgctgcgacgtctacggcgaggcctgcgccgactgctgc
ctggccagagacccctactgcgcctgggacggcaagtcctgctcccgctactccgcctcg
cagaagagatctgacccctccaggcgcagccgccgacaggatgtaaagtacggaaacccc
atcaggcagtgcaggggctacaactccaatgccaataagaacaccctggagacggtgcag
tatggagtggagggaagtaccgccttccttgagtgccaggccaggtcccctcacgtgtca
atcaagtggcatctgcaaaaggagaacagcgataggaagaaagagctgcgctgtgacggg
cgcgtggtgcggaccgagcagggcctgctgctgcgctcgctgcagatgtccgacagcggc
gtctaccagtgcacgtccaccgagaacaacttcaagcacacgctggtcaagctgcagctg
gtggtgctgtcctcgcgcacggccaacgccgcgctggccgagtcccaccaccagcacccc
cagcagacggccgtcgccggccccgccgccgggccccaggcccccgcgctcacccacccg
cccggctccagcgcctggacccccaccgccgagcagtacaaggacctgctgaccctgctg
agccagcccgagatgagcctcatcaaccagtactgccaggactactggcagcacggcgag
ccgcacccactggtcagcgggccccagagcgggctggtcggcgccggaggaggaggagga
ggaggaggaggaggaggcggcgccgtcaagcgcaaggagctgaaggagctgagggagcag
cgcaagccgcgtaaccggcgccaccacgagggccagagcgccgtcgccacggagacatga
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