Sardina pilchardus (sardine): 134093021
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Entry
134093021 CDS
T10667
Name
(RefSeq) integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03266
Virion - Herpesvirus
spil04145
Phagocytosis
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
spil04517
IgSF CAM signaling
spil04518
Integrin signaling
spil04810
Regulation of actin cytoskeleton
spil04820
Cytoskeleton in muscle cells
spil05100
Bacterial invasion of epithelial cells
spil05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
134093021
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134093021
04517 IgSF CAM signaling
134093021
04518 Integrin signaling
134093021
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134093021
09144 Cellular community - eukaryotes
04510 Focal adhesion
134093021
09142 Cell motility
04820 Cytoskeleton in muscle cells
134093021
04810 Regulation of actin cytoskeleton
134093021
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134093021
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134093021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134093021
04515 Cell adhesion molecules [BR:
spil04515
]
134093021
04090 CD molecules [BR:
spil04090
]
134093021
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134093021
Cell adhesion molecules [BR:
spil04515
]
Integrins
Integrin alpha subunits
134093021
CD molecules [BR:
spil04090
]
Proteins
134093021
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
134093021
NCBI-ProteinID:
XP_062402254
LinkDB
All DBs
Position
9:20591072..20631760
Genome browser
AA seq
1069 aa
AA seq
DB search
MLLLQNTEMGSTRKLSKGSAKFPSPIRFPKFRLCASFIVWITALASVCTGFNLDVDNRVV
YTGPEGSYFGYSVDFYVDSSSIVSILVGAPKANTSQTDVIEGGSVFFCPWRHDQSKCRVL
EFDSEGDRTFNVNNRDLKVEFKSHQWFGATVRSHGDNVLACAPRYYWRTEHDLPFSDATG
TCYLSVNNFTKTVEYAPCRTERHGPAGQGYCQGGFSADFTQDGKVVLGGPGSFYWQGQLI
TATTEEIVKAFYPSYFLLSVAGQVQTRQVQSSYDDSYLGYSVAVGEFSGDDTEDFVTGVP
KGVMLYGLVSLLNGTNLKSMLNFTGEQMGSYFGYAVATADINNDGLVDLLVGAPLFMFHH
PGGHLEEVGRVYVYLQTAPLFFLPAPHLSGTHTYGRFGASFAALGDLDQDGYNDVAIGCP
FGGEDGQGLVLIYNGQTAGLSDTPSQVLTGQWATGVLPTGFGFSIQGSKDLDENGYPDLL
VGAFGVDKAVLYRARPIVNASATLVVQPTMINPEEKNCIVTNENGTIPSSCVSLNFCLSA
DGKHLPADLAFVVELQLDSVKQTQRGLVRRALFLHSQKPSHIQRLSLANGEPLCQDTKIY
LRGEKEFRDKLTPIMVSLSFSLDPQAPVDSHGLKPVLNYQTTQLIHQKAQIQLDCGDDNI
CVPDLKLTVRGDREEVYLGDENVLTLTFNAVNEGEGGAYEADLYVLLPPEADYSGIARNN
HSLTQLTCSYAAVNDTRFVSCDLGNPMKSGTSLWAGLRFTVPRVRDSQKTVQFDLQIRSK
NENNSHSEVVSYSLEVAVMADVILQGVSRPDKLLFPPADWRPTNRWMEEDIGPQMLHVYE
LLNNGPSTLSVSTLELRCPRQVEGHRLVYPLELTTEGPINCSTKNIINPLRVKLQLSPSE
EPPALASGSSPARQSRELPRDQLSQLSNLSCWTVQCWRLQCSVGVLPRGKSAILKVRSRV
SADTFIERAYKQYLLECTVEYRVEKMPYSILPKEYPNGSTKVVTPIVWANPENPYAVPLW
IIILAILAGLLLLALVIYILYKLGFFKRPDPYGTAMEKAQLKPQASSEA
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgttactactgcagaatacagagatgggctcgacgagaaaactcagcaagggctcagca
aagttcccctcaccgatacgatttccgaagtttcgactgtgcgcgtctttcattgtatgg
ataacggccctggcgtcggtctgtacggggtttaacctggatgtggacaaccgtgtggta
tacactggacctgagggcagctactttggctactctgtagacttctacgtagacagctca
tcaattgtcagcatcctagttggtgcaccgaaagccaacaccagccaaacagatgtcata
gagggcgggtctgtgttcttctgtccctggagacacgaccaatcaaagtgcagggttctt
gaatttgacagtgaaggagatcggactttcaacgtcaacaacagagacctcaaggtggaa
ttcaaatcccaccaatggtttggggcgacagtgcgctcccatggcgacaacgtcctggcc
tgtgctccacggtactattggagaacggagcatgaccttcctttttcagacgccaccgga
acctgctacctgtctgtgaacaacttcaccaaaacagttgaatacgccccctgtcgaaca
gagagacacggtcctgccggccagggctactgccaaggggggttcagtgctgacttcact
caggatgggaaagttgttcttgggggacctggaagtttctattggcaaggccagctgatc
acagccactacggaggaaatagtgaaggccttctatccttcctacttcctgctgtcggtg
gccgggcaggtgcagaccaggcaggtgcagagcagctatgatgacagctacctcggttac
tctgtggctgttggagaattcagtggagatgatactgaagattttgtaacaggggtcccc
aaaggagtcatgctgtatggtttagtatctttactaaatggaaccaatctaaagtccatg
ctgaacttcaccggtgaacagatgggctcgtacttcggatatgcagtggcaacagcagat
atcaacaatgacgggttggtggatctgctggtgggggcgcctctcttcatgttccaccat
cctggcggtcacctggaggaggtgggccgcgtctatgtctacctgcagacggctccgctg
ttcttcctgcccgcgccacacctgagcggcacgcacacctacggccggttcggagcctcc
ttcgccgccctgggagacctggaccaggacgggtacaatgatgtagccattggttgccct
tttggtggggaggacgggcaaggcctggtcctcatctacaacggacaaacagctggattg
agcgacacaccttctcaggtgctgactggccaatgggctaccggtgtgcttcccacaggg
tttggtttctccatccaaggaagcaaagatctggacgagaatggctatccagatcttctt
gttggagcctttggagtagacaaggcagtgttgtacagggccagacccattgtgaatgcc
tctgccactttagtagtgcagcccaccatgatcaaccctgaagagaagaactgcatagtg
accaatgagaatggaaccatcccttcatcgtgtgtgagtttgaatttctgcctctctgcc
gatggaaagcacctccctgctgatttggctttcgtggtggagctgcagctggacagtgtg
aagcagacacagagagggctggtgaggagagctctcttcctgcactcccagaagccctct
cacatccagaggctctcgctggccaacggagaacccttgtgccaagacaccaagatctac
ctgcgcggtgagaaggagttccgggacaagctgacgcccataatggtcagcctgagcttc
tctctggatccccaggctccagtggactcccacggcctgaagcccgtcctcaactaccag
accacacagctcatccatcagaaggctcagattcaactcgactgcggagacgacaacatc
tgtgtgccggacctgaagttgactgttaggggggatcgagaggaggtgtatctgggggat
gaaaatgtcttgactctgacgtttaatgctgtgaacgagggcgaaggtggggcttatgaa
gcagatctgtatgtgctcctcccaccagaggctgactacagtggcatcgccagaaacaac
cattcgctaacccagctgacctgcagttatgcagcagtgaatgatactcgttttgtcagc
tgtgatctgggaaaccctatgaagtctggaacaagtttgtgggccggtcttcgtttcacc
gtgccgagagtccgggactcacagaaaactgtccagttcgacctacagatccgcagtaaa
aatgagaacaactcccacagcgaggtcgtctcgtactcccttgaggtagccgttatggca
gacgtcatccttcaaggtgtgtcccgtccagataaacttctgtttcctcctgctgactgg
agaccgaccaacaggtggatggaggaggacatcggcccccagatgctgcatgtttacgag
ttgttgaataatggtcccagcacgctgagtgtgtctacactggagctgcggtgtcctcgt
caggtggaaggtcaccgcctggtctatcccctggagctcaccaccgagggccccatcaac
tgcagcactaaaaacatcatcaaccccctgagggtcaagctccagctgagtccgtcggag
gagcccccagcgctggcgtctggctccagtccggcccggcagagcagagagctgcccagg
gaccagctgtcacagctcagcaacctgtcctgttggacagtccagtgctggaggctgcag
tgtagtgtgggggtgcttcccagggggaagagtgccatcctgaaagtgaggtctcgagtg
agcgctgacaccttcatagagagagcgtataagcagtacctgctggagtgtacggtggag
tacagagtggaaaagatgccatattccatactgcccaaggagtacccaaatggatccacc
aaagtcgtgaccccaatagtgtgggctaatccagagaacccgtatgctgtgcctctgtgg
atcatcatcctggctatactggctggactgctactgctggcactagtcatatacatttta
tacaagctgggtttcttcaagcgacctgacccttatgggacagccatggagaaggcacaa
ctcaagccccaggcttcatcagaggcctaa
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integrated database retrieval system