Sardina pilchardus (sardine): 134093053
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Entry
134093053 CDS
T10667
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04514
Cell adhesion molecule (CAM) interaction
spil04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134093053 (nfasca)
04517 IgSF CAM signaling
134093053 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134093053 (nfasca)
Cell adhesion molecules [BR:
spil04515
]
Immunoglobulin superfamily
L1 family
134093053 (nfasca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Ig_5
V-set_CD47
C2-set_2
Fn3_ROS1
Ig_6
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
134093053
NCBI-ProteinID:
XP_062402308
LinkDB
All DBs
Position
9:21653789..21720603
Genome browser
AA seq
1344 aa
AA seq
DB search
MSKQGEGAGLATWPLLLLFLRAVSSIEVPNDPKITKDMKQPPTIVKESPKDYIVDPRDNI
IIECEAKGTPTPTIMWQRNMRFFNVGKIPHVTQRKPSGTLEISFRNGGRPEDYEGEYQCF
ATNDFGTAISNKILLRVSKSPLWPKEVLEPIVVTEGSSLVLPCNPPPGLPPPMTFWMSSY
MMPIRQDARVSMGLNGDLYFSSVLSKDTSTDYSCNARFLFTHTIQQKNPYTLKVHARQPD
NNSSSFNLTDARHLLETSPSFLTPTGLSSSKMVLRGQKLLLECIAAGVPTPSIKWFKKGG
DLPMKRIRLDSFNKTLRIVNVSEEDTGDYVCMANNKIGSIQHTINVQVKAAPYWLDKPQN
LVLAPDEQGRMTCIAHGNPKPTIQWLVNGEPIETSLANPSREVEGDTIIFRRVLMGSSAV
YQCNASNEHGYLLANALFNVLDMAPRMLGPKNQLIKVTKNQQTLMDCPFFGSPLPTVRWF
KNGLGSGLDGGYYRVHANGSLEIRRTLGEDQGTYTCVASSILGKAENQVRLEVKEPTRIV
RAPEHVSAGRGTSVRFNCRISHDPTLTIHVNWLKNDLPFNYGWRITKDDESLTITNINEG
DQGTYTCLVKTEIDEDAATARLTVLEEESLSPSNRSPLLADRPEAPKDLELSDPLARSIR
LTWVPGDSNNSPITEFLVQFEENRWEPSKWQNLSSHAGNVNSVLLELSPFVNYQFRVIAI
NSVGQSQPSRPSVRYQTSGAPPDVAPDDIKGMGSKKSNMEITWKPLTDMERNAPNILYEV
SWKKKDTEEWNTFNTTQAKYVVHDTETYEPFHIKVQAINDFGRGPESGLILGYSGEDKPS
AAPAHLNVSKIDSTTVNLHWDPVDPSSVHGEFKEYRLYYWRESSLVKGLKVNKQVNSKGF
FSSSGTGILTELVPFSLYKMYMVVANSRYEGPHSNTVEFKTKQGIPDAPRYFRIAKRSSD
TIQLQWDSPLEPNGNLSGYTLKFFIVNGTEVGKEQLKSFQPNVTSYTMRVPDRHTRYKFF
LAAFTPAGSGEVSSRESPNFSNEEAFTSSVEFTDDVVATTVPVPLPTTVPTTTTTISTST
TTTISTSTTTAISTSTTVSTSTTPHSRMVPNAPATPLEIWNLTVEPNSNYANVSWDHNFP
PDTSKFVLEYTLQSNKTTKKVTVTSKHIRLAGLVEAAKYQLRVHSLERNHITSPYVTFET
LAITTDSVDIATQGWFIGLMCAIALIVLILLIVCFIKRSRGGKYPVRDKKDLPLDPVDGK
DPDGSFDYHSDEDNKPLQGSQTSLDGQVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKK
DKEETEGNESSEATSPVNAIYSLA
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcaaggcgagggggcgggtctggcaacatggccactcctcttgctcttcctg
agggccgtgtcgtccatcgaagtcccgaacgacccaaagatcacgaaagacatgaagcag
cctcccaccattgtgaaagagtctccaaaggactacattgtagaccctcgagataacatc
atcattgaatgtgaggccaaggggaccccgacaccaacgattatgtggcagaggaacatg
cgcttcttcaacgtgggcaagatcccgcacgtgacgcagcgcaagccctcggggaccctg
gagatctccttccgcaacggcggccggcccgaggactacgagggcgagtaccagtgcttc
gccaccaacgacttcggcaccgccatctccaacaagatcctgctgcgagtctccaagtct
ccgctgtggccgaaggaggtgctggagcccatcgtggtgacggagggcagctccctggtg
ctgccctgcaaccctccgcctggcctgcccccgcccatgaccttctggatgagcagctac
atgatgcccatccggcaggacgcccgcgtgtccatggggctcaacggggacctgtacttc
tccagcgtcctgtccaaggacaccagcaccgactacagctgcaacgcccgcttcctcttc
acccacaccatccagcagaagaacccctacaccctcaaagtgcacgccagacaacctgac
aataattcttcctctttcaacttgactgacgcgcgtcacctgctcgagacatcgcccagc
ttcctgacgcccaccgggttgtccagctccaagatggtgctccgtgggcagaagctgctg
ctggagtgtatcgcggccggagtgcccactcccagtatcaagtggttcaagaagggtggc
gacctgcccatgaagaggatcaggctggatagtttcaacaagacgctgcgcatcgtcaac
gtgtcagaggaggacacaggcgactacgtctgcatggccaacaacaagatcggcagcatc
cagcacaccataaacgtgcaggtcaaagctgcaccgtactggctggacaagccacagaac
ctcgtcctcgctccggacgagcagggacgcatgacttgcatcgcccacggcaacccaaag
cccaccatccagtggctggtgaacggggagcctatagagacttctctggcaaacccgagt
cgagaggtggagggcgacaccatcatattccggcgggtgttgatgggaagcagcgccgtg
taccagtgcaacgcctccaacgagcacggctacctgctagccaacgccttgttcaacgtc
ctggacatggcgccgcggatgctcggacccaagaaccagctgatcaaagtcaccaaaaac
caacagaccctcatggactgccctttctttggctccccgctgccgactgtacgctggttc
aagaatggtctgggcagtgggctcgacggcggatactaccgggtccacgccaacggctct
ctggagatcaggcggacactaggggaggaccagggcacctacacctgcgtggccagcagt
atcctgggcaaggctgagaaccaggtccgcctggaggtcaaagagcccacgcgcatagtg
agagcccctgaacacgtgtccgctggtcggggaacctcggttcgcttcaactgccgcatc
agtcacgaccccacccttaccattcatgtcaattggttgaagaatgacctgccattcaac
tacgggtggagaatcacgaaggacgacgagtctctgaccataaccaacatcaacgaggga
gaccagggcacctacacctgtctggtcaaaactgagatagacgaggacgctgccacggca
cgccttacagttcttgaggaggaatccttgtctccctccaatcgtagtcccctgctagca
gaccgcccagaggctcccaaagacctggagctttcggacccgcttgcccgcagcatccgg
ctcacatgggtacctggagatagcaacaatagccccatcacagagttcctggttcagttt
gaggagaaccgctgggagccgagcaagtggcagaacctgtccagtcacgcgggcaacgtg
aactcggtgctgctggagctgtccccgtttgtcaactaccagttccgggtgatcgccatc
aacagcgtgggccagagccagcccagcaggccctctgtgcgctaccagaccagcggagca
cctccagatgttgctcctgacgatatcaaaggcatgggctccaagaagagcaacatggag
atcacctggaagcccctcactgacatggagaggaatgcccccaacattttgtatgaggtt
tcatggaagaagaaggacactgaagagtggaacaccttcaacaccacccaagccaaatat
gtggtccacgacacggagacctacgagcctttccacatcaaggtccaggccatcaacgac
ttcggccgaggcccagaatctggcctgatactgggctactctggcgaggacaagccttct
gcagccccagcgcacctgaacgtgtcaaagattgacagcaccacagtcaacctgcactgg
gaccctgtagacccgagcagcgtccatggggagttcaaggaatacaggttatactactgg
agggagagcagcctggtgaagggcctgaaggtcaataagcaggtgaacagcaagggcttc
ttcagctcgtccggcacgggcatcctcaccgaactggtgcccttcagcctgtacaagatg
tacatggtggtggccaacagccgctatgagggcccgcacagcaacacggtggagttcaag
accaaacaaggaattccagatgctcccaggtacttcaggatcgccaagaggagctccgac
accattcaactgcagtgggactcaccactggagcccaatggcaacctgagcgggtacacg
ttgaagttctttatcgtgaatgggacggaggtgggcaaagagcagctcaagagcttccag
cccaacgtgacgtcgtacaccatgcgcgtccctgaccgccacacgcgctacaagttcttc
ctggcggccttcacgccggcggggtcaggggaggtcagctccagagagtcaccaaacttc
tccaacgaagaagcatttaccagctcagttgagttcacagatgacgtggtggctacaact
gttcccgtaccacttcccactactgtcccaacgacaactacaaccattagtacctcaaca
accactacaattagtacctcaacaactactgccattagcacctcaacaaccgttagcacc
tcgacaacaccccacagtcgcatggtcccaaacgcaccggccacccctctggagatctgg
aatctgacggtggagcctaacagtaactatgctaacgtcagctgggatcacaacttccct
cccgacaccagcaagtttgtgctagagtacaccctgcaaagtaacaagacaacgaagaaa
gtgaccgttacgagcaagcatattaggttggcggggctggtggaggccgccaaatatcag
ctaagggtgcactcactcgagcgaaaccacatcaccagcccgtacgtcaccttcgagacc
ctagcgatcacaacggacagcgtggacatcgccacacagggctggtttatcggcctgatg
tgtgccatcgccctcatcgtcctcatccttctcatcgtttgcttcatcaagaggagtcga
ggagggaagtatccagtgagggataaaaaagacctccctctagatcccgtcgacgggaag
gacccggacggatcctttgactaccacagcgacgaggacaacaagccgctgcagggcagc
cagacgtcgctggacgggcaggtgaaggagagcgacgacagcttggtggactacggcgag
ggcggcgacggccagttcaacgaggacggctccttcatcggccagtacaccgtcaagaag
gacaaggaggagacggagggcaacgagagctcggaggccacctcccccgtcaacgctatc
tactccctggcatag
DBGET
integrated database retrieval system
