Sardina pilchardus (sardine): 134093480
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Entry
134093480 CDS
T10667
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
134093480 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spil03400
]
134093480 (fan1)
Enzymes [BR:
spil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
134093480 (fan1)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
134093480 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
134093480
NCBI-ProteinID:
XP_062402515
LinkDB
All DBs
Position
10:33904092..33925937
Genome browser
AA seq
1092 aa
AA seq
DB search
GTGTIATFFSNTPPSKLACPLCGALVPRFKINEHIDTECQKFHQGNENERALPSSTEPKT
PTLLLSPQRTCRRTPEQPPGTSSPQRTCRRTPEQPPGTNSPEQSGELKTSPYFKKQQSQQ
QQEVESEKVPEQPKVVRNISLGSLSSRLSRKALTFSGEPTTKQTSRAGGTDRHDGELNSS
QKENQSELMREAPGPLVNTSEWFSSQKPAVCKQPPPVEKEERDPGSVESRSPHTSPDRCS
NESLSSNRRSKEAAGDSRPDTHTLKPDTHTLKADAHTLKPDAHTLKPDTHTLKSKLSKRA
RQRDSTGPGLHNEGSSTGLGLHNEQSGTGLGLHNQGSSTGPGLHKEQSGTGPGPHNEGSS
TGLGLHNEGSSTGPGLHNEGSSTGPGLHNEGSSVARRAAAGVDQEQNSESKQTRDSGTSQ
PEHLESSTDPTQVSSEASGSFRKPYYLRNFLSVLEAVMEQEDDRRLFNQEDLAAIHTFQL
LSGPGQALYVRLFQRKLKWLQVEKLDYSEISADLRPVVDQLVQAHFLQDERELQELVEVL
EVLPAPELRGLAKTLHLAGGNSATQRPQLVEGLLKLAKQRALFPCAPPLTSTGAVILKRA
KRLAGRCVRLCVCPRAVFSRLLLLFSLTDSLDEEAAAAGGQGQLYTVLLVNSGQLAFPQY
SIQRHARVFRHRDDLIRYEVAMRGLQEVAVAMQSGSWEDALGLYTAAKATWQELQQSGDL
QHEKELPVFLRPFTVGWTYTRIMSRGIEILQRLKCYEEAVVQLRAVLSQSVYCPDSRGRW
WDRLALNLQQHLKLHEQAIDAIRDGLSDPLVRTGHQLALHQRAARMRESPSLKKLRLLLR
DLPSVHVSDVPHVTIRGHMFPHQGGMGKSVFLRPADQEEGEEGGATVMCSVEDLALAHYR
QLGYDQGLHGEGSTFSTLFGLLMWDVIFMEGVPDVFRYPYQTCPLDLHTDCFYGNRRAAV
DARVQLVREASGETLQELLAHAWHSQQGRVCALVSWERFASLQQAQSLVGCMGGSFLAEV
MLRMARDYRHCRAGLPDLVVWSSASASYKLVEVKGPSDRLSQKQQIWLDELSKWGADVEV
CHVTAVGARARR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
gggacgggcaccatcgccaccttcttcagcaataccccccccagtaagctggcatgccct
ctgtgtggtgcgctggtgccgcgcttcaagatcaacgagcacatcgacaccgagtgccag
aagttccatcaggggaatgagaatgagcgcgcgctgccgtccagtacggaaccaaagacc
ccgacgctgctcctgtcacctcaacgcacctgcaggagaacacctgagcagccgcccggg
acgagctcacctcaacgcacctgcaggagaacacctgagcagccgcccgggaccaactca
cctgagcagagcggggagttgaagaccagtccttacttcaaaaagcagcaatcacagcag
cagcaggaggtggagtcggagaaagttccggagcagccgaaggtggtgcggaacatcagc
cttggcagcctgtcctccagactgtccagaaaggccctgacgttctccggagaaccgacc
accaagcagaccagccgtgctggagggaccgatagacacgatggtgaactgaacagctct
cagaaggagaaccaatcagagctgatgagagaagcgccaggtccgttagtgaacacctcc
gagtggttctcctctcagaaaccagctgtgtgcaaacagccccctccagtggagaaggag
gagcgtgatccgggaagtgttgaatcacgatcaccacacacttctcctgacaggtgtagc
aatgagtccctctcgtccaataggagatcgaaggaggcggcaggagatagcaggcctgac
acacacacactgaagcccgacacacacacactgaaggccgacgcacacacactgaagccc
gatgcacacacactgaagcccgacacacacacactgaagtccaaactcagcaagagagcc
agacagagagacagtactggaccgggtcttcataacgaggggtccagtactggactgggt
cttcataacgagcagagcggtactggactgggtcttcataaccaggggtccagtactgga
ccgggtcttcataaggagcagagcggtactggaccgggtcctcataacgaggggtccagt
actggactgggtcttcataacgaggggtccagtactggaccgggtcttcataacgagggg
tccagtactggaccgggtcttcataacgagggatccagtgtggcgaggagagcagcggct
ggtgttgatcaggagcagaactctgagtccaaacagacgagagattccggaacatcccag
ccggagcacctggagtccagcacagaccccacgcaggtgagctcggaagcgtcaggatct
ttccggaagccgtattacctgcggaacttcctgtccgtgctggaggccgtgatggagcag
gaggacgaccggcggctcttcaaccaggaggacctcgccgccatacacaccttccagctg
ctctcagggccaggccaggcgctgtacgtgcgtctgttccagaggaagctgaagtggctg
caggtggagaagctggactactctgagatcagcgcagacctgcggcccgtagtggaccag
ctggtgcaggcacacttcctgcaggacgagcgtgagctgcaggagctggtggaggtgctg
gaggtgctgccggcccctgagctgcggggtctggccaagacgctgcacctggccgggggg
aacagcgccacccagaggccacagctggtggaggggctgctgaagctggccaagcagcgc
gccctcttcccctgcgccccccccctcaccagcacgggggccgttatcctcaagagggcg
aagcggctggcgggccggtgtgtgcgcctgtgtgtgtgtccgcgggccgtgttctcgcgg
ctgctgctgctcttctctctgacggactccctggacgaggaggcggcggcggcggggggg
cagggtcagctctacaccgtcctattggtcaactcgggacagctggccttcccccagtac
agcatccagcgccacgccagggtgttccgccacagggacgacctcatcaggtatgaggtg
gccatgcgtggcctgcaggaggtggcagtggccatgcagtcgggcagctgggaggacgcc
ctggggctttacacggctgccaaggcaacgtggcaggagctgcagcagagtggggacctc
caacatgagaaggagctgccggtgtttctgcggccctttactgtaggatggacctacacc
cgcatcatgtctcgtggcatcgagatcctacagagattaaagtgttatgaggaggcggtg
gtccagttgagggcagttctgtcccaatcagtctactgcccagacagcagggggcgctgg
tgggaccgcctggccctcaacctgcagcagcacctcaaactccacgagcaggctatcgat
gcgatccgggacgggctctcggacccgttggtccggaccggtcaccagctggccctgcac
cagcgcgccgcccgcatgagggagtcgccgagcctgaagaagctccgcctcctcctgcga
gacctgcccagcgtccacgtcagcgacgtcccccacgtcaccatccgtggtcacatgttc
ccgcaccaggggggtatgggtaaatctgtgttcctgcggccggccgaccaggaagaggga
gaagagggcggagccacagtcatgtgctccgtggaggacctagcactggcacactacaga
cagctgggctacgaccaggggctgcatggcgagggctccaccttctccaccctgtttggg
cttctcatgtgggacgtgatcttcatggagggcgtgccagacgtcttcagatacccctat
cagacgtgtccactggacctgcacactgactgtttctacggtaaccggcgtgcggcggtg
gacgcgcgggtgcagctggtgcgggaggcgtcgggggagacgctgcaggagctcctggca
cacgcctggcacagccaacaaggacgagtgtgtgccctcgtcagctgggaacgcttcgcc
tctctgcagcaggctcagagcctggtggggtgtatgggcggctcgttcctggcggaggtg
atgttgcggatggccagagactacagacactgccgcgccggcctgcccgacctggtggtg
tggagctcagcgtccgctagctacaagctggtggaggtgaagggtccgagcgaccgtctg
tcccagaagcagcagatctggctggacgagctgagcaaatggggtgcagacgtggaggtg
tgtcatgtgaccgccgtgggggcgcgggcacgcagatga
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