Sardina pilchardus (sardine): 134093540
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Entry
134093540 CDS
T10667
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134093540 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spil04812
]
134093540 (nedd1)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
134093540 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
134093540 (nedd1)
Cytoskeleton proteins [BR:
spil04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
134093540 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Beta-prop_LRRK2
Beta-prop_IFT122_1st
eIF2A
Beta-prop_Vps41
Beta-prop_WDR41
DUF7899
Beta-prop_ACSF4
Beta-prop_SPT8
NBCH_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
134093540
NCBI-ProteinID:
XP_062402603
LinkDB
All DBs
Position
10:6658270..6666915
Genome browser
AA seq
668 aa
AA seq
DB search
MEEVLRLVSSGDCIKIWDSSSMKVLDQFSPHSSTHPVSQVCWTSNNQYLISASSVGDKVV
VSSLKTSPIPVIELAEGKKQTRVSINSTSQYLVSGGLDGIVNIWDLKTKKLYRNLKDHKQ
EVTCVAYNASDSYIVSGSISGELILHNVSKNLSSKPFGHGTIQPIRDLRYSVVKRSMLGS
ISDVGTVALWDATTQKELHTFDPAHKGPASGLAFSPANDLLFGSVGLDKKFICYDTSSKV
IVRNIKVDSPLTAIEFFPDGSTLVLGSTQGQILQYDLRNLSSPVKTVAGHKTSITCLRFQ
STQIRRKSSKLVSGKSSVSQPKRTSGKPSTPQAGTLTPTPAAPSPQPTPEPYSGERGDGQ
AHSTGIGLDGFSREADGQHSTDPLLSMDKAARVGRASLDIFSPIRESTNTEMRAGRNSLD
IFSPVCDDHKLHGSGLDSSGKRGGDLDLAPPFTGISAQRKTPLGTTGGRCYSPLSVFQTP
PPIKEEEAQTETQEGKMSERNGGSSSQESDSLATPPALQNLRMQSSIPAYLTPEITQRRA
NDVTAHLTYNSPFNGARPTLATAGAGVSESVATSLSDRIVETIGAEGAAAPLTNQQIVFI
RNMIQETLEDLRDSCHRDIVNLQVEMVRQFCIQLNEFHEVVEKYSVNNSLLEEIEKLREE
NRRLRTNY
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggtcctgcggctcgtgtcgtcgggcgactgcattaagatatgggactcaagc
tccatgaaagtgttggaccaatttagtccacacagcagcacacatccggtatcccaggtt
tgctggaccagcaacaatcagtacctcatcagtgccagcagtgttggagataaggttgtc
gtgtcaagcctcaagacctcccccattccagtgatcgagcttgctgaagggaaaaagcaa
actcgagtcagcatcaactccacatctcagtacttggtgagcggtggtcttgacggcatt
gtcaacatttgggacttgaagacaaagaaactttaccgaaaccttaaggatcacaaacaa
gaagtcacgtgtgttgcttacaatgccagtgacagctacattgtctctggctccatcagt
ggtgagctcattctacacaacgtatccaagaacctgtccagcaagcccttcggtcatgga
actattcagcctatccgcgacctgaggtactctgtggtgaagcgctccatgctgggcagc
atatcagacgtgggcacagtggctctgtgggacgccaccacacaaaaagagctgcacacg
ttcgacccagcccacaaagggcctgcctccggcctggcgttctccccagcaaacgacctt
ctgtttggatcggtgggactggacaagaagttcatctgctatgacaccagcagtaaagtt
attgtgcgcaacataaaggtggactctcccctcactgcaatcgagttcttccccgacggg
tccactctggtcctgggctccacccagggacagatactacagtatgacctccgcaatctc
agctctccggtgaaaactgtcgcaggtcacaagacgtccatcacctgcctgcgcttccag
agcacccagattagacggaagtctagtaaattggtttcgggaaagtcctctgtttcccag
ccgaagaggacctcagggaaaccaagcactccgcaggcagggaccttaacccccaccccc
gcagcgcccagcccccagcccaccccagagccctattctggagagagaggagacggccag
gcccacagcacagggataggcctggatgggttctcacgagaagctgacggtcagcacagc
acagacccactgctcagcatggacaaggcggcccgcgtgggtcgggccagtctggacatt
ttctctccaatcagagagagcaccaacacagagatgcgggcaggacgcaacagcctggac
atcttttctcctgtctgtgatgatcataaactccatggatctggcctagattcgagtgga
aagagaggaggtgatcttgatttggcgcctccattcactggcatttcggcacagcgcaag
acccctcttggcacaacgggggggcgctgctacagtcccctttctgtgttccagacacca
ccccccatcaaagaggaggaggcccaaacagagacacaagaaggcaaaatgtctgagagg
aatggtggaagttcaagccaggagtctgatagcctcgccacacccccagcactacagaac
ttacgaatgcaatcatctatcccagcgtacctcactccggaaatcactcagaggagggcc
aatgacgtcacagctcatctgacctacaattcaccctttaatggagcacgtcctacactt
gctacagcaggagcaggggtgtctgaatcagtggcaacctcactgtccgaccggatagtg
gaaaccatcggagcggaaggggctgcagcgcctcttactaaccaacagatcgtcttcatc
cgcaacatgattcaggagacgctggaggacctcagagattcctgtcacagagacatagtg
aacctgcaggtggagatggtgcggcagttctgcatccagttgaatgagttccatgaggta
gtggagaagtactcggtgaacaactcgcttcttgaggagattgagaagctaagggaggag
aaccgacgcctcagaaccaactattaa
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