KEGG   Sardina pilchardus (sardine): 134093540
Entry
134093540         CDS       T10667                                 
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
  KO
K16547  protein NEDD1
Organism
spil  Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:spil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spil03036]
    134093540 (nedd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:spil04812]
    134093540 (nedd1)
Chromosome and associated proteins [BR:spil03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     134093540 (nedd1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     134093540 (nedd1)
Cytoskeleton proteins [BR:spil04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     134093540 (nedd1)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_EML_2 WD40 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st WDR55 Beta-prop_WDR90_POC16_2nd WD40_Gbeta WD40_MABP1-WDR62_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st Beta-prop_LRRK2 Beta-prop_IFT122_1st eIF2A Beta-prop_Vps41 Beta-prop_WDR41 DUF7899 Beta-prop_ACSF4 Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 134093540
NCBI-ProteinID: XP_062402603
LinkDB
Position
10:6658270..6666915
AA seq 668 aa
MEEVLRLVSSGDCIKIWDSSSMKVLDQFSPHSSTHPVSQVCWTSNNQYLISASSVGDKVV
VSSLKTSPIPVIELAEGKKQTRVSINSTSQYLVSGGLDGIVNIWDLKTKKLYRNLKDHKQ
EVTCVAYNASDSYIVSGSISGELILHNVSKNLSSKPFGHGTIQPIRDLRYSVVKRSMLGS
ISDVGTVALWDATTQKELHTFDPAHKGPASGLAFSPANDLLFGSVGLDKKFICYDTSSKV
IVRNIKVDSPLTAIEFFPDGSTLVLGSTQGQILQYDLRNLSSPVKTVAGHKTSITCLRFQ
STQIRRKSSKLVSGKSSVSQPKRTSGKPSTPQAGTLTPTPAAPSPQPTPEPYSGERGDGQ
AHSTGIGLDGFSREADGQHSTDPLLSMDKAARVGRASLDIFSPIRESTNTEMRAGRNSLD
IFSPVCDDHKLHGSGLDSSGKRGGDLDLAPPFTGISAQRKTPLGTTGGRCYSPLSVFQTP
PPIKEEEAQTETQEGKMSERNGGSSSQESDSLATPPALQNLRMQSSIPAYLTPEITQRRA
NDVTAHLTYNSPFNGARPTLATAGAGVSESVATSLSDRIVETIGAEGAAAPLTNQQIVFI
RNMIQETLEDLRDSCHRDIVNLQVEMVRQFCIQLNEFHEVVEKYSVNNSLLEEIEKLREE
NRRLRTNY
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggaagaggtcctgcggctcgtgtcgtcgggcgactgcattaagatatgggactcaagc
tccatgaaagtgttggaccaatttagtccacacagcagcacacatccggtatcccaggtt
tgctggaccagcaacaatcagtacctcatcagtgccagcagtgttggagataaggttgtc
gtgtcaagcctcaagacctcccccattccagtgatcgagcttgctgaagggaaaaagcaa
actcgagtcagcatcaactccacatctcagtacttggtgagcggtggtcttgacggcatt
gtcaacatttgggacttgaagacaaagaaactttaccgaaaccttaaggatcacaaacaa
gaagtcacgtgtgttgcttacaatgccagtgacagctacattgtctctggctccatcagt
ggtgagctcattctacacaacgtatccaagaacctgtccagcaagcccttcggtcatgga
actattcagcctatccgcgacctgaggtactctgtggtgaagcgctccatgctgggcagc
atatcagacgtgggcacagtggctctgtgggacgccaccacacaaaaagagctgcacacg
ttcgacccagcccacaaagggcctgcctccggcctggcgttctccccagcaaacgacctt
ctgtttggatcggtgggactggacaagaagttcatctgctatgacaccagcagtaaagtt
attgtgcgcaacataaaggtggactctcccctcactgcaatcgagttcttccccgacggg
tccactctggtcctgggctccacccagggacagatactacagtatgacctccgcaatctc
agctctccggtgaaaactgtcgcaggtcacaagacgtccatcacctgcctgcgcttccag
agcacccagattagacggaagtctagtaaattggtttcgggaaagtcctctgtttcccag
ccgaagaggacctcagggaaaccaagcactccgcaggcagggaccttaacccccaccccc
gcagcgcccagcccccagcccaccccagagccctattctggagagagaggagacggccag
gcccacagcacagggataggcctggatgggttctcacgagaagctgacggtcagcacagc
acagacccactgctcagcatggacaaggcggcccgcgtgggtcgggccagtctggacatt
ttctctccaatcagagagagcaccaacacagagatgcgggcaggacgcaacagcctggac
atcttttctcctgtctgtgatgatcataaactccatggatctggcctagattcgagtgga
aagagaggaggtgatcttgatttggcgcctccattcactggcatttcggcacagcgcaag
acccctcttggcacaacgggggggcgctgctacagtcccctttctgtgttccagacacca
ccccccatcaaagaggaggaggcccaaacagagacacaagaaggcaaaatgtctgagagg
aatggtggaagttcaagccaggagtctgatagcctcgccacacccccagcactacagaac
ttacgaatgcaatcatctatcccagcgtacctcactccggaaatcactcagaggagggcc
aatgacgtcacagctcatctgacctacaattcaccctttaatggagcacgtcctacactt
gctacagcaggagcaggggtgtctgaatcagtggcaacctcactgtccgaccggatagtg
gaaaccatcggagcggaaggggctgcagcgcctcttactaaccaacagatcgtcttcatc
cgcaacatgattcaggagacgctggaggacctcagagattcctgtcacagagacatagtg
aacctgcaggtggagatggtgcggcagttctgcatccagttgaatgagttccatgaggta
gtggagaagtactcggtgaacaactcgcttcttgaggagattgagaagctaagggaggag
aaccgacgcctcagaaccaactattaa

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