Sardina pilchardus (sardine): 134093852
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Entry
134093852 CDS
T10667
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04137
Mitophagy - animal
spil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134093852 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134093852 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134093852 (amfra)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
134093852 (amfra)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134093852 (amfra)
Multi subunit type E3
ERAD complex
134093852 (amfra)
LMBR1L-GP78-UBAC2 complex
134093852 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-RING_16
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
Prok-RING_4
zf_RING_Vps8
zf-RING_Vps41
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
134093852
NCBI-ProteinID:
XP_062403119
LinkDB
All DBs
Position
10:complement(2546763..2554621)
Genome browser
AA seq
630 aa
AA seq
DB search
MPLFFLERFPWPSLQSYTALSALVLAGSVLSAYTVVTDPGFVTSVSEEAQTELKDQNEEE
QKDDFWNVAFNVLLYLVSDTLFVWVMVNTACCMLMLIAKAIQYVVFGPLRAGEKQHLKDK
FWNFIFYKFIFIFGVLNVQSVEEVVLWCLWFAVLIFLHLMVQLCKDRFEYLSFSPTTPMS
GHVRVLALLASLLLGCCVLAVPCGLMGHTQGLHTAAFMAAECLLVTVRTGHVIMRYSIHL
WDLNHQGTWESKSTYVYYTDFLMELGLLCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYL
FHEVQRRIHRHKNYLRVIDNMESRFAVATLEELVANNDDCAICWDSMTSARKLPCGHLFH
NSCLRSWLEQDTSCPTCRLPLNISEGGGAGATEERGREPLDDNLPPRPAADARPHINQHN
HFFHFDGSRIASWLPSFSVEVMHTTNVLGIVQANNSQLNAMAHQIQEMFPQVPYHLVLQD
LHLTRSVEVTTDNILEGRIQVPFPAQAAERTPPPASEDPAGASDVPDTAAVETEDFEMRG
SRFSKSAGERQKMLLQRKEELLLRARRRFLSKSPAEGPSSSLYAATADGDDEGLAAGDEG
ARASDSMSVRRRMLAAAAERRLQRQPEAPQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgttctttttggaaagatttccctggcctagtctgcagtcctacactgcactg
agtgctcttgtgctcgcgggttctgtcttaagtgcctacactgttgtgactgatcctggg
tttgtcacatcggtctcggaagaagcccaaacggagcttaaagaccagaatgaggaagag
cagaaggacgacttctggaatgttgctttcaacgtgttgttgtacctggtgtctgacact
ctttttgtctgggtgatggtgaatacagcctgctgtatgctgatgcttatagcaaaagcc
attcagtatgtagtatttggaccactgcgagccggtgagaagcagcatttgaaggataag
ttttggaacttcatcttttacaagttcatcttcatcttcggtgtgttgaatgtgcagtct
gtggaggaagttgtgttgtggtgcctctggtttgcggtgctcatcttcctccatctcatg
gtccagctctgcaaagatcgctttgaatacctgtccttctcccccaccacccccatgagt
ggccacgtgcgcgtgctggccctgctggcctccctgctgctgggctgctgtgtgctggcc
gtgccctgtggcctcatggggcacacgcagggcctacacaccgccgccttcatggctgcc
gagtgtttgctagttacggtacgcacaggacatgttattatgaggtactccatccacctg
tgggaccttaaccaccagggcacgtgggagagtaagagcacgtatgtttactacacagac
ttcctcatggagctgggcctgctctgtctggacctgatgcaccacatccacatgctgctg
tttggcaacatttggctgtcgatggccagcctggtgattttcatgcagctgcgctacctc
ttccatgaggtccagaggaggattcaccgccacaagaactacctacgtgtcattgataat
atggagagcaggtttgctgtggccaccctagaagagttagtggctaataatgatgactgt
gccatctgctgggactccatgacctcagcacgcaagcttccctgtggccatctcttccac
aactcctgtttgcgctcctggttggagcaggacacttcctgtccgacgtgccgcttgcct
ctgaacatcagtgagggcggcggcgcgggtgcgactgaggagaggggccgggagccgctg
gacgataacctgccccccagacctgcagctgacgcccgcccacacatcaaccagcacaac
cacttcttccacttcgatggctctcgcattgccagctggttgcccagcttctcggtggag
gtcatgcacaccaccaacgtcttgggcattgtccaggccaataactcccagctcaacgcc
atggcccatcagatccaggagatgttccctcaggtgccctaccacctggttctgcaagac
ctgcatttgactcgctctgtggaagtcaccactgacaacatcttggagggacgcatccag
gtgcccttccctgcccaggcagctgagcggacccccccaccagcctctgaggacccggca
ggagcctctgatgtgccggacacggcggctgtggagacggaggactttgagatgaggggc
agccgcttctccaagtctgcaggcgagagacagaagatgctcctgcagaggaaagaggag
ctgctcctgagggctcgcaggcgtttcctgagtaagagccctgctgaaggcccctccagc
tcgctctacgcggccacggcggatggcgatgacgagggactggccgcaggggacgaaggt
gctcgggcctcggactccatgagcgtgcggcgcaggatgctggcggcggccgccgagcgg
cgcttgcagaggcagcccgaggccccccagtga
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