KEGG   Sardina pilchardus (sardine): 134094037
Entry
134094037         CDS       T10667                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03013  Nucleocytoplasmic transport
spil03015  mRNA surveillance pathway
spil03040  Spliceosome
spil05168  Herpes simplex virus 1 infection
Brite
Messenger RNA biogenesis [BR:spil03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     134094037
    TREX complex
     134094037
Spliceosome [BR:spil03041]
 Complex C
  Other components
   EJC/TREX
    134094037
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    134094037
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded RRM_3
Other DBs
NCBI-GeneID: 134094037
NCBI-ProteinID: XP_062403393
LinkDB
Position
1:48358098..48363423
AA seq 299 aa
MADKLSMSLDDIIKQNKQQKGGGGGGRSRRGSGSSRGGSGGFRSGSGPTRNRQNFNRDRQ
PRPAPYSRPRELPDKWQHDMFDDGFGSSRVQRRDSSPVIGLETTGKLLVSNLDFGVSDAD
IKELFKEFGNLTKAAVHYDRSGRSLGTADVHFEKKADALKAMKQYNGVPLDGRSMDIQLV
TGQISSSRRSPSRQSSSEGGRGGDRDRDSDSGGIKRRVRLGARDSDSGGSFRRERLGVRD
PDFGGSRREGGGGGGGGGGGYRGRGGRGGRGGRRNETKQLTAEELDAQLDAYISKMDTS
NT seq 900 nt   +upstreamnt  +downstreamnt
atggcggacaaactcagtatgtcgttggatgatatcatcaaacagaataagcaacagaaa
ggtggcggtggcggcggaagatctcgcagaggaagcggcagcagccgtgggggcagtggg
ggatttcgaagtggatcgggtccaacgagaaatcgacaaaatttcaaccgggacagacaa
ccaagaccggctccatattccaggcctagggaactgccagacaaatggcaacatgacatg
tttgatgatggattcggaagtagcagagttcagaggcgagactccagcccggttattggt
ttggagaccaccggcaagctgctggtgtccaacttggactttggggtgtctgatgctgac
ataaaggaattatttaaggagtttggcaatctgacaaaagcagccgtgcactatgaccga
tcaggccgaagcctgggaacagcagacgtccactttgagaaaaaggctgatgcactcaaa
gccatgaagcagtacaatggtgtccctcttgacggtcgctccatggatatccagctggtg
accggacagatctcttcaagtcggaggtcaccgtcaaggcaaagctcaagcgaaggagga
cgaggaggagaccgagacagagactccgattccggtggaatcaagcggcgggtccgactc
ggggctcgcgactctgattctggcggctctttcagacgggagcggctcggcgtgcgagac
cctgatttcggcggatctagacgtgagggtggtggtggcggcggtggcggcggcggcgga
tacagaggaagaggaggacgtggtggacggggaggacgacggaacgagaccaaacagctc
accgctgaggagctggacgcacagctagatgcctacatttccaagatggacaccagttaa

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