Sardina pilchardus (sardine): 134094133
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Entry
134094133 CDS
T10667
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04620
Toll-like receptor signaling pathway
spil04621
NOD-like receptor signaling pathway
spil04622
RIG-I-like receptor signaling pathway
spil04623
Cytosolic DNA-sensing pathway
spil05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134094133 (irf7)
04621 NOD-like receptor signaling pathway
134094133 (irf7)
04622 RIG-I-like receptor signaling pathway
134094133 (irf7)
04623 Cytosolic DNA-sensing pathway
134094133 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134094133 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134094133 (irf7)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
134094133 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
134094133
NCBI-ProteinID:
XP_062403513
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Position
10:complement(29221332..29224994)
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AA seq
435 aa
AA seq
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MQVTEGHSSTMNSFNNRPQFGRWLIQQVNSGLYEGLYWLDDQKTTFRIPWKHNSRKDCND
GDNRIFREWACVSGKIHENPNDKAKWKTNFRCALSSLKNQFKQLHDNSKGSVDPHKVYQL
IAQPEYRCNFENLPVDSYPMIEDIYTANPADFSPDIMADELQLMNITLDLNPQPDAQPWV
EDYAPNNQVLPEIYPLPPVPVEQPQQNNVPVAVVEPYYQASPLPPICELEISIHYRKKEV
LKRRVSAPLVQLHHRREIGDLNGQAVCFPSTEAVVDHKQVMYTNRLLESIQMGLLLEVDH
TGIYGTRQDIPCKVFASTSNPAESQAEEPRKLGKNDREPLLIWEKFAKDLMEFKENKRGS
PDYSIYLCFGERYPDGKPLEKKLIVVKVVPLICRELHERAQMEGASSLNSGVSLQISHNS
LFDLINGTFGLPMQE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgacggagggacattcatcgacaatgaatagcttcaacaacagacctcagttc
ggtcgctggctgatacagcaagttaatagtgggctgtatgaaggcttatattggctcgat
gatcagaaaacaactttccggatcccatggaagcacaactccaggaaagactgcaatgat
ggagataacaggatatttagggaatgggcatgcgtcagtgggaaaattcacgagaatccg
aatgacaaagccaagtggaagacaaatttccgctgcgcgctttccagcctcaaaaaccag
ttcaaacagttgcacgacaactccaagggttcagtggacccccacaaagtgtatcagctc
atcgctcaacctgagtacagatgcaacttcgaaaatcttccggtggacagttatccaatg
attgaggacatctatactgctaacccagcggatttctcacctgatatcatggctgatgag
ctgcagttgatgaacatcacccttgacctgaacccacaaccagatgcacagccttgggtt
gaggactatgctccaaacaatcaagttctgccagaaatctaccctctcccacctgtgcca
gtggagcagcctcagcagaataacgtacctgttgcagtggtcgagccatactatcaagct
tctcctttgcctcccatctgtgagctggagatctccatccactaccgcaagaaagaggtg
ctgaagaggagggtgtcggcacctctggtccaactccaccaccggcgcgagatcggtgac
ctgaacgggcaggcggtgtgtttccccagcacagaggccgtcgtggaccacaagcaggtc
atgtacaccaatcgtctgctggagagcatccagatgggtctactgctggaggtggaccac
acgggcatttacgggacccgccaagacattccctgcaaggtgttcgccagcaccagcaat
cctgcagagagccaggccgaggaacccaggaagctggggaagaacgaccgggagccactg
ctcatttgggagaaatttgccaaagacctgatggaattcaaagaaaataagcgggggtct
ccagattactccatctacctgtgcttcggggagagatatccagacggaaagcccctggag
aagaaactcattgttgtcaaggtggtgccgctgatctgccgtgaacttcacgagcgtgca
cagatggaaggagcctcctcactcaactctggcgttagtctgcagatctcccacaacagc
ctgtttgacctcatcaacggcaccttcggcctgcctatgcaagagtga
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