Sardina pilchardus (sardine): 134094534
Help
Entry
134094534 CDS
T10667
Symbol
prdm11
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134094534 (prdm11)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134094534 (prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Zn_ribbon_PRDM4
Dimer_Tnp_hAT
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
134094534
NCBI-ProteinID:
XP_062404079
LinkDB
All DBs
Position
10:complement(34406357..34427874)
Genome browser
AA seq
1191 aa
AA seq
DB search
MADPPSFSTQSSPEQPRDGSVSHISEQPVDESSKRPRVDQDCCTADLQQGADLWFCEECK
EFFLEECPSHGPPVFVPDTPVAVGVRGRAALTLPSGVLLLQEGGGLDVCCVDQDIPKGAL
FGPYQGEMVSHDQPSSCFSWVIVDKNSYRCIDGSDESKANWMRFVRSSSDVSDRNLSAFQ
HGEHIYFRVCRPLVSGERLRVWYSDDYLRRLQDISQDRILHNLDTGAVKSEEAAPNPDES
KAPLTPNPDESKAPRTPSPDESKGPVLSPDESKGPVLRSDESKGPVLRSDESKGPVLRSD
ESKGPVLRSALHGRRAPLKVSAAEEGEGPPQAKKKKIDLIFKDVLEASLEASQRQESPLD
SAAFPLTRTRAHLRAQLCPALSNSLPALETDCKDGAALLALGSAEFDLSALKREEEGEDP
ADPATSSFCPNCVKLRLRIRELEAELRRLRGEEREEPTALPEPHCGDELTVAEALTPVPV
VLEDDDPDVDSADESLSADLMVAADDPSKLPAGPGRRIRRFKQEWLKKFWFLRYSATLNE
MWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMC
RNMMLLFNAAYHLALEGRPFSDLRPLAQLLKKCELKVVDQYMNEADCQILIHHIARAFRE
DLAERLRLSPFLSVIVDGRHEEQTAGDSVAVYVQFLTGEGGAATEFLSLQPLAVTGPDGY
VQAVDRAFSVLGLRLQEKMLVGLGMDGVNVPSSLRASVYVGMRKAAPWVLCLPVMLQRPQ
MEVLDGISGKELCCLEELESNLKQLLSFYRYSPRMLQELRSAAPTLADETHFLGDVRAVR
WVIGEPNVLNALIKDYLEVLAHLKDISGQTQRADAAAIALSLLQFLMDYQSVKLIYFLLD
IIAVLSRLAFVFQGDHLLVSQVDARIEEAIQEIGQLVDVPGEYLQEFEENFRESFNGVDL
QNLRVAEAKFQSIRQKICRRSQAVLTQRLDPQSRPVVQACRVLDLTCWPHGRDELQAFGE
EEIQLMFAHLESIPALGSATPHERVDARGSLAQEWRDLKADYFSMSGFREVAAHVCRYRQ
RFPLLHRLVQVVRVLPCSSACCDKGHAALQRLARNSRARIAPDNLNDLLTLAVNGPPIAS
FDGKRPLDSWFEEKSGSGYSLSAEMLSRMSSSDQKALLHGVDMTADFYPDC
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccccctccttcagcacacaatcgtctccagagcaaccgcgggacggcagc
gtgagccacatctcagagcagcctgtggacgagtccagcaagaggccgagagtggaccag
gactgctgcaccgccgacctccagcagggggcagacttgtggttctgtgaagagtgtaag
gagttcttcctggaggagtgtccgtctcatgggccgcccgtgtttgtgccggacaccccg
gtggcggtgggcgtgaggggccgtgcggcgctcacgctgccctcgggggtgctgctgctg
caggaggggggcggcctggacgtctgctgcgtggaccaggacatccccaagggggcgctg
ttcggcccctaccagggagagatggtgtcccacgaccagcccagcagctgcttctcctgg
gtgattgtcgacaagaactcatacagatgcatcgatggcagtgatgaatctaaggccaac
tggatgaggttcgtgcggagctcgtcggacgtctctgatcggaacttgagtgcgttccag
cacggggagcatatctacttccgcgtatgtcgccccctggtgtccggagagcggcttcgc
gtctggtacagcgacgactacctgaggaggctgcaggacatctcacaggaccgcatctta
cacaacctggacacaggggctgtcaaatctgaggaggcagctccgaacccagacgagtcc
aaagctcctctgactccgaacccagacgagtccaaagctcctcggactccgagcccagac
gagtccaaagggccggtgctgagcccagacgagtccaaaggcccggtgctgaggtcagac
gagtccaaaggcccggtgctgaggtcagacgagtccaaagggccggtgctgaggtcagac
gagtccaaagggccggtgctgaggtcggcgctgcacggccgcagggctccgctgaaggtc
agtgcggcggaggagggggaggggccgccgcaggccaagaagaagaagatcgacctcatc
ttcaaagacgtgctggaggcatctctggaggcgtcgcagcgccaggagagccctctggac
agcgccgccttccccctgacgaggacccgcgcccacctccgcgcccaactgtgcccggcg
cttagcaacagcctgccggcgctggagacggactgcaaggatggcgccgccctgctggcg
ttggggtcggcggagtttgacctgagcgcgctgaagagggaggaggaaggggaggatcct
gccgaccccgccacttcctccttctgccccaactgcgtcaagctgcggctgcggattcgc
gagctggaggcggagttacgacgactcaggggcgaggagagggaggagccaacagcccta
ccggagcctcactgtggggacgagctgacagtggcggaggccctgacccctgttccggtg
gttctggaggacgatgacccggacgtggactcggcggacgagtcgctctccgccgacctc
atggttgccgcggacgacccgtccaagctgcccgcgggtcccggccggcggatccggcgc
ttcaagcaggagtggctgaagaagttctggttcctgcgctactcggccacgctcaacgag
atgtggtgccacgtgtgccgtcagtacacggtccagtcgtcccgcacctccgccttcatc
atcggctccaagcagttcaagatccacaccatcaagctgcacagccagagcaacctgcac
aagaagtgcctgcagctctacaagctgcgcatgcaccccgagaagacggaggagatgtgc
cgcaacatgatgctgctcttcaacgccgcctaccacctcgccctggagggccggcccttc
tccgacctccgacccctcgcccagctgctgaagaagtgcgagctgaaggtggtggaccag
tacatgaacgaggccgactgccagatcctgatccaccacatcgcgcgcgccttcagggag
gacctggccgagcggctgcggctctcgcccttcctcagcgtcatcgtggacggccggcac
gaggagcagacggccggcgacagcgtggccgtctacgtgcagttcctgaccggcgagggc
ggcgccgccaccgagttcctgtcgctgcagccgctggcggtgaccgggccggacggctac
gtgcaggcggtggaccgagccttctccgtgctggggctgcggctgcaggagaagatgctg
gtggggctgggcatggacggggttaacgtgccctccagcctgcgcgccagcgtctacgtg
ggcatgcgcaaggcggcgccgtgggtgctgtgcctgcccgtgatgctgcagcggccgcag
atggaggtgctggacggcatcagcggtaaagagctgtgctgcctggaggagctggagagc
aacctgaagcagctgctgagcttctaccgctactcgccgcgcatgctgcaggagctacgc
agcgccgcgcccacgctggccgacgagacgcacttcctgggcgacgtccgcgccgtgcgc
tgggtcatcggcgagcccaacgtgctcaacgccctcatcaaggactacctggaggtgctg
gcgcacctgaaggacatcagcggccagacgcagcgggcggacgccgccgccatcgcgctc
tcgctgctgcagttcctgatggactaccagtcggtcaagctcatctacttcctgctggac
atcatcgccgtgctgtcacgcctcgccttcgtcttccagggggaccacctgctggtgtct
caggtggacgcccgcatcgaggaggccatccaggagatcgggcagctggtggacgtgccc
ggggagtacctgcaggagttcgaggagaacttccgcgagagcttcaacggcgtggacctg
cagaacctgcgcgtggccgaggccaagttccagtccatccgccagaagatctgccggcgc
agccaggccgtgctgacccagaggctggacccacagagccgacccgtggtgcaggcgtgc
cgcgtgctggacctgacctgctggcctcacggccgcgacgagctgcaggccttcggcgag
gaggagatccagctgatgttcgcgcacctggagagcatcccggcgctgggcagtgccacg
cctcacgagcgggtggatgcccgcggcagcctggcgcaggagtggcgcgacctcaaggcc
gactacttcagcatgagcggcttccgcgaggtggcggcccacgtgtgtcgctaccggcaa
cgcttcccgctgctccaccggctggtgcaggtggtgcgagtgctgccgtgctcgagcgcc
tgctgcgataagggtcacgccgcactgcagagactcgcccgcaacagccgcgcccgcatc
gcccccgacaacctcaacgacctgctcaccctcgccgtcaacggaccgcccatcgccagc
ttcgacggcaagcgcccgctggacagctggttcgaggagaagtcggggagcggctactcc
ctctcggccgagatgctgagcaggatgtccagctccgaccagaaggccctgctgcacggg
gtggacatgaccgcagacttctacccggactgctga
DBGET
integrated database retrieval system
