Sardina pilchardus (sardine): 134094588
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Entry
134094588 CDS
T10667
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03420
Nucleotide excision repair
spil04115
p53 signaling pathway
spil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134094588 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
134094588 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
134094588 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134094588 (ddb2)
03400 DNA repair and recombination proteins [BR:
spil03400
]
134094588 (ddb2)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134094588 (ddb2)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
134094588 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
134094588
NCBI-ProteinID:
XP_062404160
LinkDB
All DBs
Position
10:16389383..16398009
Genome browser
AA seq
498 aa
AA seq
DB search
MARKKADGIHAKSKNNNNASSGGVKKRKSESTSESLSKKVKAKKDEKASGTGNKQSALTC
STNQRRGSHGSILHYLYKNSLGQNIHSHLRQCLQEPFVRSLASYGLHSTASPFDRRVTCL
EWHPTLPTTLAVGSKGGDIVLWDYEGPNKMSFVKGKGACDFIGGMKFCPSDLSRVYTASG
DGSLTLQSFQGVSSQTLSRTQDCGHAHHNVCYWYCCVDVSVSRQMLATGDNTGRLVLLGL
DGHKIFNDKLHKSKVTHAEFNPRCDWLLATASVDSTVKLWDLRHLKDKKSFLHEMQHNKP
VNSAYFSPTDSSKLLTTDQGDEIRVYSSSDWSKPEHIIQHPHRQFQHITAIKATWHPIYD
LIVAGRYPDDRICVGDTRSVDIFDANTGNLLHQMLDPNAKGIISLNKFNPLGDVMASGMG
VNILVWKREEIVSGMQESLLTKRMEASRGRAGTSRVRRQQQRPPRDRRGNKEDLKLKKKL
ASLESTETKSKTHRSRKK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaagaaagcagatggcattcacgccaagagcaagaacaacaacaatgcatct
agcggtggtgtgaaaaaacgaaagagcgagagcacaagcgaatcgctctccaagaaagtg
aaagctaaaaaagatgagaaagcctctgggaccggaaacaagcagtctgccttgacgtgc
tcaacaaatcaaaggagaggaagccatgggagcatactgcactacttatacaagaactcc
ctcggtcagaacattcactcacacctgcgacagtgtctacaggagccttttgtgcgttct
ctggcctcttacgggctccacagtacggccagcccgtttgaccgtagggtcacctgcctg
gaatggcaccccacactacccacaacactggctgtaggctccaaagggggagacatcgta
ctatgggactatgaggggcctaacaaaatgtcctttgtgaaagggaaaggagcgtgtgat
ttcattggtgggatgaagttctgtccgtcggacttgtccagggtctacacagcttcgggt
gatggttccctgaccttgcagagctttcaaggtgtctcctctcagaccctctcgagaacc
caggactgtggccacgctcaccacaacgtttgttactggtattgctgtgtggacgtgtct
gttagccgccagatgctagctacaggggacaacactggacgacttgttcttctgggcttg
gatggccacaagatatttaatgacaagctgcacaaatccaaagtgacccatgcagagttc
aacccccgctgtgactggctcctggccacggcctctgtggacagcacggtcaaactctgg
gacctgagacacctcaaggacaagaagagttttctgcatgaaatgcagcacaacaaacct
gtgaactcggcctacttcagccccactgacagctcaaagctactcaccactgaccaaggt
gatgagatcagggtctactcctcatctgattggtccaagccagagcacatcattcagcat
cctcacaggcaattccagcacatcacagccatcaaggccacctggcatccaatatatgac
ctcattgtagctggtcgttaccctgatgaccgtatctgtgttggtgatactaggtctgtt
gacatatttgatgccaacacagggaatctgttgcatcagatgcttgaccccaacgccaag
ggcatcatatctctgaacaagttcaaccctcttggtgatgtgatggcttcaggaatgggc
gtcaatatactggtttggaaaagggaggagattgtcagtggcatgcaggagagcctgctg
acgaagaggatggaggcaagcagaggccgagctggaacatccagagtacggcgtcagcaa
cagcgccctcccagggacagaaggggaaataaagaggatttgaagctgaagaaaaaattg
gcatcactggagtcaacagaaaccaaatccaagacgcacaggagcagaaagaaatga
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