Sardina pilchardus (sardine): 134094630
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Entry
134094630 CDS
T10667
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
spil Sardina pilchardus (sardine)
Brite
Enzymes [BR:
spil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
134094630 (tdrd12)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134094630 (tdrd12)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134094630
NCBI-ProteinID:
XP_062404213
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Position
10:18705051..18727578
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AA seq
1464 aa
AA seq
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MLEISILKIEDPSCLWGRIMRGPGVQVASQKDYDDLQIEMNLYYHDVNLDSQSVKPSSLK
KGQLCVVFSPLLLSWCRAIVESVYEGVEGTRVTCFLVDHVEDVSVSDDSVYALLQRFLQL
PLRVRKFQLSGVHPLSLRVSIADAKAELVPSPRWDSSATRYLYILWQASSLVEAVVCGSQ
DNCLAIELYLTINRVKICANHDLLAKRLACTRTEKESLQKERRGLPPVFLKGDMFASPEQ
FLALNGFEVKLTPPNGVTNKVSSGSLPELVKESELSDLSCGEVYGAVQNTVMPPEQTSDR
AFDAEEPGSPCTLPSPPRNRQVEEETSGSEVSEDPGPTLADEVMAELKLFRYLKFLNPDA
VGGFDKSTVDLSGQSDTDSTTDQVTAGSVELAEIKTEERAEAEVVLPNEMTEKEDAPLSQ
MPQLQADHEPVTCEPVTCEPVTCEPVKDDDVHSSDSPSVQDWRLEESSAPQQRTEDEMAA
ARLLEWLNPAPLNLDAEDDVMVAPTDPKRNGVLVHASVAIEPWQSLARCSISDHFKRYLV
RRKCAGPTVAQQYCWPHVFRGNDTLLVTHAGQDPLNYLPPLITHIQNGSVHSSLVTRTGP
IAVILCPRWEKVQVVFDLLETCRAVQDLNPALVLLGQDKDEAKAFRVHKNCKLLVTTPFT
LARLLAANCGLFLRLCHLVMDEVDVLYSRAPAEMEVVLKHFRSVVSSTDRSRTPQQLVAV
GSSWTALMEGLVKDHMRDATVIITVPKEAALYGGVHQMIMLCLDCEKTPVMLRALDFSPA
VSQKTLIITSGLDELEQVFEAVVNSSALALKAHEGLTHQFDFVMERWRKAIGAGTHVILV
TTEKCLKALGVADATCVVHYGFPTSPKLFGSRLFSMSDNFRVLSDKYHPENSSNPPATNS
ILLLTEKNARHVSGVLRYLRRTDALLPAELLQFAQGVQLAREEQKQHRPLCGYLKSLGFC
RDTGVCPDRHILNRAQDDPKHLDTGLVGVVPLFIKSATVYYGRLVHPDDSGFDELAAQMA
AHYAAGHRWATEVMEGELYAIQQEDEYHRVRVVSLPDKDDRLFSCSVVHFLDEGSTQEVK
SHQLLQLPPAFQAFPPQAVEIILCGLRPIDNEVDWNPKVTRAIGQKIRGKQHHAKVVMCL
GNSVWVNPMVRRTPAPLLKTFINEYNVYSEVLSTGMGVANTDHLNMLKQALDAPEGLLDH
SALPLSENHSDKSTLDLKELATRDAQVESTEGPGESPAPGLEMAAIPPQRDSEPADLFSL
KGLLSDCVSGGIGRSTPSGDMAPLKHIELEGFSPQSWTSSVNTPSENGVDKQVVSSHINL
RKTLAVDGPQSCHPQIKWFQRQDVLILRVKLMNPVMQTCNFFSDRVVYSAYANNKHYRVT
LELQNDISADRCSWDMKCNEPEIRLVKRERGEWRGLLKHKNAFVSYDFDHMEEEDLSATA
GHWFEANTGEDGCYVTSDSGSESD
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaatatccatacttaagattgaagaccctagctgcttgtggggtagaattatg
agaggcccaggggttcaagtggctagtcaaaaggattatgatgacttgcaaattgagatg
aacctatactaccatgatgtcaatctagattctcaatctgtaaagccatcttccctgaag
aagggacagctgtgcgtggtgttctcccctctcctgttgagctggtgccgtgccattgtg
gagtctgtgtacgagggagtggaggggaccagggttacctgcttcctggtggaccatgtg
gaagatgtcagcgtctcagatgacagtgtgtacgccctgctgcagaggttcctccagctg
ccgctccgggtgaggaagttccagctgagtggcgtccatcccttgagcctgcgcgtgtcc
atcgccgatgccaaagcagagctggtaccctcgccgcgatgggacagctctgctacaaga
tacctgtacatcctctggcaggcatcttctctagttgaagcagtggtgtgtggatcacag
gacaattgcctggctattgaactctacctgactatcaaccgtgttaagatctgtgcgaat
cacgacctgctggcgaagaggctggcctgcaccaggactgagaaggagagtttgcagaag
gaacgcagaggcctcccgcccgtcttcctgaaaggcgacatgtttgccagcccagagcag
ttcctggccctcaacgggtttgaggtgaagttgaccccaccgaatggggtgaccaataaa
gtctccagtggatccctgccagaactggttaaggagtcggagctgtcagacctgtcctgt
ggggaggtgtatggagccgtccagaataccgtcatgccaccggagcagacttcagataga
gcctttgatgccgaagagccaggaagcccctgcactttacctagtccaccacgaaaccgc
caagttgaggaggagaccagtggaagtgaagtgagtgaggatcctgggccgactctagca
gatgaagtgatggcagagttgaagctgttcaggtatctcaagtttttgaatcctgatgct
gttggtggatttgacaagtccacggtggacctgagcggtcagtctgacacagacagtacc
actgatcaggtgactgctggctcagtcgaactagcggagataaagacagaggagagggct
gaggcagaagtggtgcttcccaacgagatgacggagaaggaagacgcgccgctttcccag
atgccccagcttcaggcggaccatgagccggtcacctgtgagccggtcacctgtgagccg
gtcacctgtgagccggtcaaggatgatgatgtccattcttctgatagccccagtgttcaa
gactggagacttgaagagagcagcgccccacagcagagaacggaagacgagatggcggcc
gctcgtttgctggaatggctcaaccctgccccactaaatctagatgcggaagatgacgta
atggtggcgcccacggaccccaagaggaatggggttctggttcacgcttcagttgccata
gaaccctggcaaagtctggcccgctgctcaatctctgaccacttcaaacggtacctggtg
aggcggaagtgcgctggccctacggtggcgcagcagtactgctggccccacgtgttccgg
ggcaacgacacactgctggtgacccatgcaggccaggacccgctgaactacctccccccg
ctcatcacacacatccagaacggctccgtccactcctccctcgtcacacgcaccgggccc
atagcggtgatcctgtgcccgcgatgggagaaggtgcaggtggtgttcgacctgctggag
acctgccgggccgtccaggacctcaacccggcgctggtgctgctgggccaggacaaggac
gaggccaaggccttcagggtccacaagaactgtaagctgctggtgactacccccttcacg
ctggcgcggctgctggctgccaactgtgggctgttcctgcggctgtgccacctggtgatg
gatgaggtggacgtgctctactccagggcgcccgcagagatggaggtggtgttgaagcac
ttccggagtgtggtgtccagcactgaccggtcgcggactccgcagcagctggttgcggtg
ggcagcagctggacggcgctgatggaggggctggtgaaggaccacatgcgggacgccacc
gtcatcatcaccgtccccaaggaggccgccctgtacgggggggtccaccagatgatcatg
ctgtgtctggactgtgagaagacccccgtgatgctcagggctctggacttctcccccgcc
gtctcccagaagaccctcatcatcaccagcggcctggacgagctggagcaggtctttgag
gctgtggtcaactcctcggctctggcgctgaaagctcacgagggcttgacccaccagttt
gactttgtgatggagcgctggaggaaagccatcggagcaggcactcacgtcatcctggtt
accacggagaagtgtctgaaagccttaggagtggctgacgccacctgtgtggtgcattat
ggcttccccacctctcccaaactattcggcagtcgtctgttctccatgtcggacaacttc
agagtcctctctgacaagtaccaccctgagaactcctccaaccctccggccaccaactcc
atcctgctgctgacggagaagaacgcgcggcacgtgtctggcgtgctgcgctacctgcgg
cgcaccgatgccctgctgcccgccgagctgctgcagttcgcccagggagtccagctggca
cgggaggagcagaagcagcaccggcccctctgcgggtacctcaagagcctcggcttctgc
agggatactggagtgtgtcctgacagacacattctcaacagagctcaagacgatcccaag
cacctggacacgggattggttggggtggtgcctctgttcatcaagagtgccaccgtgtac
tacgggcgcctggtccacccagacgactccggctttgacgagctcgctgcccagatggct
gcccactacgccgcagggcaccgctgggccaccgaagtgatggagggagagctgtacgcc
atccagcaggaggacgagtaccacagggtgcgtgtggtgtctctgccagataaagacgac
cgcttgttcagctgctccgtggtgcacttcctggatgaggggagcacacaggaagtgaag
tcacaccagctgctgcagctgccgcctgcgttccaggccttccctccgcaggccgtggag
atcatcctgtgtggcctcaggcccatcgacaacgaggtggactggaacccaaaggtgacg
agggccatcggtcagaagatcagaggaaagcagcaccatgcgaaggtggtgatgtgcctg
ggcaacagcgtctgggtcaaccccatggtgcggcggacccctgcccctctcctgaagacc
ttcatcaacgagtacaacgtctacagcgaggtgctgtccacgggcatgggcgtggccaac
actgaccatctgaacatgctgaagcaggcgcttgatgcccccgaggggcttttggatcac
agcgccctcccgctttctgaaaaccactctgacaaaagcacactggatttgaaggagctt
gccacacgtgatgcccaggttgagagcacggagggcccaggagagagccctgcccctggg
ctggagatggccgccatacccccgcagagggactcggagccggctgacttgttcagcctt
aaaggcctgctttcagattgtgtatctgggggtatcggccgctcaacacccagtggagac
atggctccgcttaagcacattgaattggagggattttcaccccaaagctggacgtcatca
gtcaatacccccagcgaaaatggagttgataagcaggttgtcagctctcatatcaacttg
aggaaaacccttgcagtggacggtcctcaaagttgtcacccacagatcaagtggtttcag
agacaggatgttcttatcttgcgggtgaaactcatgaaccctgtgatgcagacctgcaac
ttcttctctgacagggtggtgtacagtgcatatgcaaacaataagcactatcgcgtcacc
ttggaactacagaatgacatcagcgctgaccggtgctcatgggatatgaagtgtaacgag
cccgagatcagactggtgaagagggagagaggagagtggagagggctcctcaagcacaag
aatgcctttgtcagttatgactttgatcacatggaggaggaagacttgagtgcaacagcg
ggacactggtttgaggccaacacgggagaagatggctgttacgtgacttcagacagtggg
agtgagagtgactga
DBGET
integrated database retrieval system
