Sardina pilchardus (sardine): 134094686
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Entry
134094686 CDS
T10667
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134094686 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134094686 (cnot2)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134094686 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134094686 (cnot2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
134094686
NCBI-ProteinID:
XP_062404291
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Position
10:3383433..3395501
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AA seq
557 aa
AA seq
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MGSKGKGCSPRILYRRIHSHLGSARREIDVVTNGMFSATRKKFGEGVDSDYPDDSAMYYG
QPSMFQHRSEKDMLASPSPSSSGQLSQLGASLYGPQSALGFSIRGMSNNTPQLNRSLTQS
VQLPSHITPTTGVPTVSLHTPPSPNRGILPMNTRNMINHSQVGPGLGMSGRTNSMGSSGL
GSPNRSSPSIICMPKQQPARQPFTINSMSGFGMNRNQAFGMNSSLSSNIFNGTDGSENVT
GLDLSDFPALADRTRREGGGNPTPLHNPLAGRAPYVGMVTKPSNEQSQDFSIHNEDFPAL
PGPNYKDPTLTSDDSKSNLNSSGKNSSSVDGPKFPGDKASSTQNNNQQKKGIQVLPDGKV
TNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPW
ASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVE
LFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEE
RPHVPTTFNYNPAQQAF
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaaagggtaaagggtgctcacccaggattctctatcgtagaatccacagccat
cttggatctgcgagaagggaaattgatgtggtgacaaacggcatgtttagtgctacaaga
aagaagtttggagagggagtcgatagtgactaccctgatgacagtgctatgtactatggc
caaccatccatgtttcagcatcgatcagaaaaagacatgcttgcatctccttcaccctca
tcttcagggcagttgtcacaactgggtgcaagtctatacgggccccaaagtgcactaggg
ttctctataaggggcatgagcaataataccccacaactaaatcgcagcctaacacaaagc
gtccaactaccgagccatattactccaacaacaggggtcccaacagtgtccctccatact
ccaccctcacctaacagagggatcctgcccatgaacaccagaaacatgattaaccactcg
caagttggccctggcctgggcatgagtggcaggaccaacagcatgggtagttcaggactg
ggcagccccaaccgcagctcacccagcatcatctgcatgcccaagcagcagccagcacgc
cagccgttcaccatcaacagtatgtctgggtttggaatgaacaggaaccaggcatttggg
atgaacagctctctatcaagtaatatcttcaatggaacagatgggagtgaaaatgtgacg
ggcctagatctctcagacttcccagccttggcagacagaactcggagggaaggaggtggt
aatcctactccattgcacaacccactggctgggagagctccctatgttgggatggtcact
aaaccatcaaacgaacagtctcaggatttctccatccacaacgaggacttccctgcactt
cctgggcccaattataaggatcccacattaaccagtgatgacagcaaatcaaatctaaac
tcatcaggcaagaacagttctagtgtggatggtcccaagttccctggtgacaaggcatca
tcaacacagaacaacaaccagcaaaagaaagggattcaggttttacctgatggcaaggtg
accaacattccctctgggatggtaacagaccagtttggcatgattggactgttgaccttc
atccgggcagccgagacagaccctgggatggttcatttggcactaggaagtgacctcaca
acactaggactcaacctcaattctcctgaaaatctgtaccccaagtttgcctctccgtgg
gcctcggcaccgtgtcgaccacaggacattgactttcatgtcccgtcagagtacttgacc
aacattcacataagggataagctggctgccataaaactggctcgttatggcgaagatctt
cttttctacctgtattacatgaatggaggagatctcttgcaactcctagcagcagtagag
cttttcaacagggactggaggtaccataaggaggagcgggtttggatcacaagggccccc
ggtatggagcccaccctgaagaccaacacttatgagagggggacgtattacttctttgac
tgtcttaactggaggaaggtagctaaggaatttcacctggagtatgacaagctagaggaa
cggccacatgttccaacaacctttaactacaacccagcacagcaggccttctga
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