Sardina pilchardus (sardine): 134094699
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Entry
134094699 CDS
T10667
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134094699 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134094699 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
134094699
NCBI-ProteinID:
XP_062404307
LinkDB
All DBs
Position
10:2890776..2912871
Genome browser
AA seq
1795 aa
AA seq
DB search
MQNDGIEKSSFCFTMFHITVLLFVSVLAQAQEPELGDVCTQGSCYPATGDLLIGRAHQLS
ATSTCGLVKPDPFCIVSHLQDEKKCFVCDSTETYSEKMRHTTSHRIENVVTTFAPNRLKT
WWQSENGMENVTIQLNLEAEFHFTHLIMTFKTFRAAAMVIERSADFGRTWLVYRYFAYDC
ETSFPSVSQGPMKKVDDVICDSRYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKI
TNLRVKFVRLHTLGDNLLDSRMEIKEKYYYALYDMVVRGNCFCYGHASECAPVDGVGATE
GMVHGHCMCNHNTKGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDECHFDMAVF
VASGNVSGGVCDECRHNTMGNNCEQCKPFFYQHHERDIRDPNICEPCNCDPVGSLNGGIC
DALTDVSTGLIAGQCRCKPNVEGERCDQCKQGHYGLSDDHLGCKPCTCNALGTVPGGSPC
ETDSGKCYCKRLVTGRNCDQCMPQHWGLSNDMDGCRPCDCDLGGALNNDCSAETGQCQCR
EHMFGRACDQVESGFYFIALDHYTYEAEDAKFGPGVTVVQRPYPVDRTPTWTGVGFVNVP
EGAYLEFNIDNLPHSMEYDILIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPEDDN
QRLSLHPGSRYVALPRPVCFEAGLNYTIRLSLPLYSTLSDIQSPYTLIDSIVLMPHCKNL
EIFSGSEGGDVVTNNAWDTFQRYRCLENSQGVVKTPMTDICKDYIFSVSALLHSGAKACK
CDPMGSLSTVCDPNGGQCQCRTNVMGRNCDSCAPATFLFGPSGCRPCECNPQGSLHAFCH
EATGQCECVPGAYGRQCDRCLPGHWGFPNCRPCTCNGHTDQCDVHSGECLGCREHTTGHN
CERCLSGYYGDPVLGSGDHCRPCMCPDGPGSNRQFAGGCYKSPDSFQVFCVCSPGYQGAR
CDECAPGYYGNPHQAGGQCLPCQCNSNIDMMDPGACDASSGACLRCLHHTEGPDCSRCKL
GYYGNALTQSCRKCICNHQGTAQDSCPSLGDCHCELSSGQCQCLPNVVGQHCDLCAPDTW
NMASGKGCEDCNCSPEHSYGSSCNEISGQCSCKPGFGGKTCHECRELFWGNPEVQCHACD
CDRRGTAEPQCNKATGHCVCVEGVSGPRCDTCARGFSGEFPNCERCHQCFAEWDVIVGEL
TNQTHRLVQKVNAIKSSGITGPYQQTIDNVEKSASSIRNILAQNPATQPLTEIQELLEQA
TDLVSEMTSKLNLTEEALGKVSLENNGTDTKLEALKEDAQKLERTAKELLEQVEFVKNSD
VRGATDSITKYFQQSLSAETRANASSSDPDSTVEQSAALRQTVEQRMNETGDEFLNKQDT
HAKRLDDLAGQLETLSLAELSEKTCGSRAGSESCADSPCGGLSCVDAKGNRKCGGEGCDG
LATLASSAWRKAKDFEKEIGSAMEEVEKLSKLVSEAKVKADGAKLSAQTVLLKTNETKRR
VDQSNEELRQLIKQIRDFLTQDGADLESIEAVANEVLDMQMPTTPAQLQNLTDEIRERVG
SLSSVEDILNQSAADIQRAESLLEQARKASKEATDVRDTAVMVKEALEQAEKAQNTAAEA
IKQATTDIKGTQDLLTSVESETADSEFRLNNATQRLHRLEKDVALLKEKAHNTTSTAEKT
EQDMEDINKVAEQVKKDLDSDIKEKYKTVEGLITQKASGISDAKKRAEMLQQEAKDLLLQ
ASDKLKLLKDLEKSYDDNQKTLEDKANQLVDLEKAVRELLKEISHKVTLYSTCLF
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgacggaattgagaaatcatcgttttgcttcacaatgtttcatataacggtg
ctcttgtttgtcagcgtcctagcccaggcccaagagccggagctgggggatgtgtgcacc
caggggagctgttaccccgccacgggagatctcctcattgggcgagcacaccagctctcc
gccacctccacttgtggcctggtcaagcccgatcctttctgtatcgtcagtcacctacag
gatgagaagaagtgctttgtttgtgattccaccgagacctacagtgagaaaatgaggcac
accaccagtcacaggattgagaatgttgtgacaacgtttgcccccaaccgcttgaaaacc
tggtggcagtccgagaatggtatggagaatgtaaccatccagctgaatctggaagctgag
tttcactttacgcatctcatcatgaccttcaaaactttccgtgctgcagctatggtgatt
gagcggtcagctgactttggaaggacatggctggtataccgctactttgcctacgactgt
gaaacgtctttcccatccgtctcccaagggccgatgaagaaggtggatgacgtcatctgt
gattcccgctactctgacattgagccctcaacagaaggagaggtcatcttccgagtcctg
gatcctgtgttcaggattgaggatccatacagtccccggatccaaaacatgctgaagatc
accaatctccgagtgaaattcgtcaggcttcacacactgggggacaacctgctggactca
cgcatggagatcaaggagaagtactattacgctctgtacgacatggtggtcagggggaac
tgcttctgctatggccatgcgtccgagtgtgccccggtggatggagtcggtgctactgaa
ggcatggttcatggtcactgtatgtgcaatcacaacaccaaggggctgaactgtgagagg
tgccaagatttctatcatgacttaccctggaggcccgctgagggccgcaacaccaacgct
tgcaaaaagtgtaactgcaatcaccactcggacgaatgccactttgacatggcggtgttc
gtggcctcgggcaatgtgagcggaggtgtgtgtgatgagtgccgccacaacaccatgggc
aacaactgtgagcagtgcaagcctttcttctaccagcaccacgagcgagacatacgggac
cccaacatctgcgagccctgtaactgtgacccagtgggctctctgaacggagggatctgc
gatgctctgaccgacgtgtccactgggctgattgctggccagtgccgctgtaagcccaac
gtggagggagagcggtgtgaccagtgcaagcaaggtcactatggtctgagcgatgaccat
ctgggctgcaagccttgtacctgcaatgctctcgggacagttcctggaggaagcccctgt
gaaacagacagtggaaagtgctactgcaagcgtctggtcactgggagaaattgtgaccag
tgtatgcctcagcactggggtttgagcaatgacatggatggctgtcgcccatgtgactgt
gacctcggcggggctctcaacaatgactgttctgcagagacagggcagtgtcagtgtcgg
gagcacatgtttggtcgggcctgtgaccaggtggagtcaggattctacttcattgcactg
gaccactacacttatgaggcagaggatgccaaatttgggcctggcgtgacagtggtgcag
aggccttaccctgtggacagaactcccacctggactggcgttgggttcgtgaatgttccg
gagggggcgtacctggagttcaacatcgacaaccttccccattccatggagtacgacatc
cttatccgctatgaacctcagttgccagagcagtgggaggaggtgttgatgactgtcatc
aggcccagagtgatcacagccgacagcagatgtgcaaacacaatgcctgaggacgacaac
cagcggctctctctccaccccggctccaggtatgtggcgcttcccaggcccgtgtgcttt
gaagctgggctgaattacaccatccggctcagcctgcccctctactccacactcagtgac
atccagtccccctacaccctcatcgactcaattgtgctgatgccgcactgtaagaacctg
gagatcttctcagggtcagagggaggagatgtggtgaccaataacgcatgggacaccttc
cagcgctacaggtgcctggagaacagccagggcgtggtcaagacccccatgaccgacatc
tgcaaggactacatcttcagtgtgtctgcactgttacactcgggagctaaagcctgtaag
tgtgatcctatgggatccctcagcacagtgtgtgacccaaatggtggccagtgtcagtgt
cgtaccaacgtgatgggcaggaactgtgacagctgtgctcccgccacattcctctttgga
ccatctggctgcagaccgtgtgagtgcaaccctcagggctccctccatgccttctgccac
gaggccactggtcagtgtgagtgtgttcccggtgcttacggacgccagtgtgaccgctgc
ctgcctggccactggggcttccccaactgccgtccctgcacctgcaacggccacactgac
cagtgcgacgtccactcaggagagtgcctgggctgcagagagcacaccaccggacacaac
tgcgagaggtgtctcagtggttactatggtgacccagttcttggatctggagaccactgc
cgcccgtgtatgtgtcctgatggtccaggaagtaatcgtcagtttgctgggggctgctac
aagagcccggactccttccaggtgttctgtgtgtgcagccctggatatcaaggtgccagg
tgcgatgagtgtgccccaggttactatggcaaccctcaccaggcgggaggccagtgtctc
ccgtgccagtgcaacagcaacatcgacatgatggacccgggcgcgtgtgatgccagctct
ggtgcctgcctcagatgcctgcaccacaccgaggggccagactgcagccgctgtaagctg
ggctactatggcaacgccctcacccagagctgcagaaagtgcatctgcaaccaccaaggc
accgctcaggactcctgcccctctctgggagactgccactgtgagctgtccagcgggcag
tgccagtgtctccccaatgtggtgggccagcactgtgacctgtgtgcccccgacacctgg
aacatggccagcggcaaaggctgcgaggactgcaactgcagcccagagcactcgtacggc
agctcctgcaatgagatctcaggccagtgttcctgcaagcctggctttggggggaagaca
tgtcatgagtgcagagagttattctgggggaatccagaggtgcagtgtcatgcttgtgac
tgcgaccgcaggggcactgcagagccccagtgcaacaaggccacaggtcactgtgtgtgt
gtggagggagtgtcaggtcccaggtgtgatacctgtgctcggggattctcgggcgagttt
cccaactgtgagcgctgccaccagtgctttgcggagtgggacgtgattgtgggggagctc
accaaccagacccaccggctggtgcagaaggtcaacgccatcaagtccagtggcatcacg
gggccttaccagcagacaatagacaacgtggagaagagcgccagctccatccggaacatt
ctggcacaaaatccagccactcagcccctcactgaaattcaggagcttttggagcaagcc
acggatctggtgtcagaaatgaccagcaagttgaacctaactgaggaggcgctgggcaag
gtgtcgctggagaacaatggcacagacaccaagctagaggcgctcaaagaggatgcccaa
aaactggagcgtaccgccaaagagcttctggaacaggtggagtttgtgaagaactctgac
gtgcgtggagccacagatagcatcaccaaatacttccagcagtctctgtcggcggagacc
agagccaacgcctctagcagtgacccagacagcacggtggagcagtcggctgccctgcgc
cagacggtggagcagaggatgaatgagacgggagacgagttcctcaacaagcaggacaca
cacgccaagagactggacgatctggctggccagctggagaccctcagtctagcggagctg
agcgagaagacgtgcggcagccgtgcgggctcagagagctgtgcggactccccgtgcggg
gggctcagctgtgtggatgccaaggggaacaggaagtgtggcggggagggctgcgatggc
ctggccacccttgcctccagcgcctggcgcaaagccaaggactttgagaaagagattggc
agtgccatggaggaggtggagaagctctccaagctggtgtcagaggcgaaggtcaaggca
gacggtgccaaactgagtgcccagactgtcctcttgaagaccaacgagaccaagcggcgt
gtggaccagagcaacgaggagctccgccagctcatcaagcagatccgagacttcctgacc
caggacggcgcggacctggagagtatcgaggctgtggctaatgaggtcctggacatgcag
atgcccaccacgccggcccagctgcagaacctgaccgacgagatccgtgagcgcgtgggc
agcctgtccagcgtggaggacatcctcaaccagagcgccgccgacatccagcgcgcagag
agcctgctggaacaagcccgcaaggccagcaaagaagccacggacgtccgggacacggcg
gtgatggtgaaggaggcgctggagcaggcggagaaggctcagaacacagcagccgaggcc
atcaagcaggccaccacggacatcaagggcacgcaggacctcctcacctctgtggaatct
gaaacagcagattctgagttcaggctaaataacgcaacacagaggctacaccgcctggag
aaagacgtggcgttgctcaaggagaaagcccacaacaccaccagcactgctgagaagaca
gagcaagacatggaggacatcaacaaagtagctgaacaggttaaaaaggacctggacagt
gacataaaagaaaaatacaaaacagtggagggactgatcacacagaaagcgagcggcatc
tccgacgccaagaagagggcagagatgctacagcaggaagccaaagaccttctgctgcaa
gctagtgacaagctgaagctcctcaaagacttggagaagtcgtatgatgacaaccagaag
acgctggaggataaggccaatcagctggtggatctggagaaggctgtgcgggaactgctc
aaggagatcagccataaagtcactctatacagcacctgtctcttttaa
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integrated database retrieval system