Sardina pilchardus (sardine): 134094778
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Entry
134094778 CDS
T10667
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
134094778 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spil04812
]
134094778 (lsp1a)
Cytoskeleton proteins [BR:
spil04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
134094778 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
134094778
NCBI-ProteinID:
XP_062404432
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Position
10:9608318..9639154
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AA seq
615 aa
AA seq
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MSGALLRRNSSKQGLQNLLRVTAQRSIEDAEEIERERRRRAREAFRREHGLSAPDGASLD
ALDAEASVEATPSAQNFTSSAKATGSVVLDEDEGFSDWTQRLGQERRLRLENGRPAEATA
ERGMNGTAKHTEKIHCSSSSVTPARLQRLPPREKENRDAAREEKVEEETRLGSRATEKRR
KEFGKKEHSQTEREVEQNGKDTRMSPFKKGAESQAADMDEKMKKKEVKVSYTSKVLMQHE
PKPRNNKEEEETASHVIRARKTLRSPSQSQPATAMTMAASEPRDEEAAAAFLETEQKLEK
IRRSHQEKESQELEQLRQKQAEAEAELEELKKRRELRRRVREEEERRREEEEQHRLAKEE
EEKRHMKEEIERRRMEAAEKRMKSLNDGEEPFNALSPKSPTVKREDEERLTAESTDLITE
RTESLNRSLKKSNSFKKTPPPLLLSKIDDKLEQYTHAVEVSSKETKPAKAAAMDVLSPPK
PVASTKSLFEAGEAWSPSAPRGQPSKETEGIKVGVADLITNWVKGSVDGSNRNSPSRPAD
VKPGDVLQKKNLWEVIGENSSSGKPGSGGKGNPSGKRYKFIVTGHGKYEKIPVDDEEDYC
DFSNGKTGELCHDDF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagcgctcctcaggaggaactccagcaagcagggactacagaacctgctgagg
gtgacggcccagaggagtattgaagatgccgaggagattgagagggagcgcaggcgcagg
gcacgggaggccttccgtagagaacacggcctctccgcacccgacggggcctccctggac
gccctggacgccgaggcctcagtagaggccacaccgtcagcccagaactttacgagctcc
gccaaggccaccggctccgtggttctggatgaggacgagggcttcagtgactggacgcag
aggctgggtcaggagcgcaggctcaggctggagaacgggcgtccggcggaagcgacggcc
gagcggggaatgaacggcaccgccaagcacacggagaagatccactgctcctcctcctct
gtcacacccgccaggctgcagaggctaccgccgcgggagaaggagaaccgcgacgcggcc
agggaggagaaggtggaggaggagacgcgtctggggagcagggcgactgagaagaggagg
aaggagttcggaaaaaaggaacacagtcagacagagagagaggtggagcagaacggcaaa
gatacaaggatgagccccttcaagaagggggccgagagtcaagcagcagacatggatgaa
aagatgaagaagaaggaagtgaaagtgtcttacacgtccaaagtcctcatgcagcacgag
cccaagccccgcaacaacaaagaggaggaagagacagcttcacacgtgatcagagccagg
aagactctcaggagcccgagtcagtcccagccggcgacggcgatgacgatggcggcgtcg
gagccccgggacgaggaggcggcggcggcgttcctggagacggagcagaagctggagaag
atccggcgcagccaccaggagaaggagagccaggagctggagcagctgcggcagaagcag
gcggaggccgaggccgagctggaggagctcaagaagaggcgggagctgaggaggcgcgtg
cgcgaggaggaggagcgccggagggaggaggaggagcagcacaggctggccaaagaggag
gaggagaagagacacatgaaggaggagatcgagaggaggaggatggaggcggccgagaag
aggatgaagagcttgaacgacggcgaggaaccgttcaacgcactcagtcccaagagcccc
acagtgaagagggaggatgaggagagattgacagctgagagtacagacttgatcactgag
cggaccgagtctttgaaccgttccctgaagaagagcaacagcttcaagaagacgcctccg
ccgctgctcctctccaagatcgacgacaagctggagcagtacactcacgcggtcgaggtt
tcctcaaaagagaccaagccggccaaggcagctgctatggacgtgctgagtcctcccaag
ccagtggcctccaccaagagcctctttgaagccggggaggcctggagcccaagtgccccc
cgaggccagccctctaaggagacggaggggatcaaagtaggcgtggctgatctgataacc
aactgggtaaaagggtctgttgacggcagtaacaggaactccccatccagacctgcggat
gtgaaaccaggtgatgtgctgcagaagaagaatctttgggaagtaatcggagagaactct
tcatcaggcaaacctgggtcaggaggaaagggcaatccttctggaaagaggtacaaattt
attgtgactggccatggcaaatacgagaagatccctgtagacgatgaggaggattattgt
gatttttcaaatggaaaaacaggtgaattatgccatgatgacttctaa
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