Sardina pilchardus (sardine): 134094940
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Entry
134094940 CDS
T10667
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134094940 (shoc2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_5
LRR_13
LRR_At5g56370
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
134094940
NCBI-ProteinID:
XP_062404446
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All DBs
Position
1:50137777..50153065
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AA seq
581 aa
AA seq
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MSSTLGKDKDSKEKDPKGPSSGKEREKEPKGLGGFSKDGKESKTKGKDAKDGKKDAGGTP
SSVAFSVKNTIVRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPNSIKE
LTQLTELYLYSNKLQSLPPELGCLSGLVTLALSENSLTSLPDSLDGLKKLKMLDLRHNKL
REIPPVVYRVGSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLI
TLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPR
SLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLN
MEHNRINKIPFGIFSRARVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDI
CGLVSLEVLTLSNNLLKKLPHGIRNLHKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN
QLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS
KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtactttaggcaaagacaaagactcgaaggagaaggaccccaaaggtccctcc
tctgggaaagaaagggaaaaggagcccaagggcctggggggcttcagcaaagacggcaag
gagagcaagaccaaagggaaagatgccaaagacgggaagaaggatgccggcgggacgcct
tcatccgtggccttctctgtgaaaaacaccatcgtgcggcccaaccccgccacgggcacc
cgcaagaagtccagcaacgccgaggtgatcaaagagctgaacaagtgccgcgaggagaat
tccatgcgcctggacctgtccaaacgctccatccacctgttgcccaattccatcaaggag
ctgacgcagctgaccgaactttacctgtacagcaacaagctgcagagcctgccgcccgag
ctgggctgcctgtccggcctggtgacgctggccctgagcgagaactcgctcaccagcctg
cccgactcgctggacggcctgaagaagctgaagatgctggacctgcggcacaacaagctg
cgggagatcccgccggtggtgtaccgcgtcggctcgctcaccacgctctacctgcgcttc
aaccgcatcaccacggtggagaaggacatccgcaacctgtccaaactcaccatgctgagt
atccgcgagaacaaaatcaagcagctgcccgccgagatcggggaactgtgtaacctcatc
acgctggacgtagcgcataaccagctggaacacctacctaaagagattggtaattgcaca
cagatcactaaccttgatttacagcacaacgagctactggacctccctgagacaataggc
aatctgtcaagcataaatcgcttgggtttgcggtacaataggctgtcagcaatccctagg
tcattagccaagtgcagagagctggaggagctgaaccttgaaaacaacaacatctcagtg
ttaccagaggggcttctctctagcctggtgaacctgacaagcctgactctggcaaggaat
tgcttccagtcgtacccagtgggaggaccatcgcagttctccaccatctactcgctcaac
atggagcacaaccgcatcaacaagatccccttcggcatcttctcaagggccagagtgctg
agcaagctgaacatgaaggacaaccagttaacttccctccctcttgactttggaacctgg
acaagtatggttgagctgaacctggccaccaaccaactgaccaagatcccggaggacatc
tgtggccttgtgtctttggaggtccttacattgtccaacaatctcctaaagaagctgcct
catggcatccgaaacttgcacaagctccgagagctggatctagaggagaacaagttagag
tctttgcccaatgagatcgcctaccttaaagatttacagaaactggtgttgactaataat
cagctgaccacgctgccccgaggcatcggccacctcaccaacctgacccacctgggcctg
ggagagaacctcctgcagcacctgccagaggagattggtactctggagaatcttgaggag
ctgtacctgaatgacaaccccaacttgcacagtctgcccttcgagctggcactctgcagc
aagctgtccatcatgagcattgagaactgccctctcagccacctacccccacagatcgtt
gccggaggcccctcctttatcatccagttcttgaagatgcagggcccctatcgcgccatg
gtctaa
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