Sardina pilchardus (sardine): 134095056
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Entry
134095056 CDS
T10667
Symbol
pdgfba
Name
(RefSeq) platelet-derived growth factor beta polypeptide a isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04010
MAPK signaling pathway
spil04020
Calcium signaling pathway
spil04510
Focal adhesion
spil04540
Gap junction
spil04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134095056 (pdgfba)
04020 Calcium signaling pathway
134095056 (pdgfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134095056 (pdgfba)
04540 Gap junction
134095056 (pdgfba)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134095056 (pdgfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
spil04052
]
134095056 (pdgfba)
00536 Glycosaminoglycan binding proteins [BR:
spil00536
]
134095056 (pdgfba)
Cytokines and neuropeptides [BR:
spil04052
]
Cytokines
Growth factors (RTK binding)
134095056 (pdgfba)
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Growth factors/receptors
134095056 (pdgfba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
134095056
NCBI-ProteinID:
XP_062404455
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Position
1:50260975..50273662
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AA seq
551 aa
AA seq
DB search
MGGKKSSCILLLAAFAAFLRLGSAEGDPLPPSLVGLVRDSPIASIEDLRKLLDTDSVEEE
SDNQTTNEIHSSDVHHRVPRSLMASAEPALQAACKVRTEVLEVTRSMHDRTNAHFMLWPL
CVEVQRCSGCCNGRTLQCVPIVTETRQLQMTKITYVKMRPHYEKVIIPVEDHVRCGCQPL
TSAHAGRSSSTTARKPQATPPPPPAPRVAHKPPPPPHGQAKEELHRHEQLKQHQRQQLEE
RGGVQEPAWASKYSPSHTAGEPPHHTPARTDYQQHRRTTPQHPLTHSQTGDRDGEAGAGQ
MPSSAQPSFGDGGHREDGGRPPTLGHGSGDDSGRHVQGGQQQYQAPDHTQNQQQQQQGPQ
HDYRLTLGEQPRHRPALSGTHMLRDATTPHQPQHAPPYHHHGQPDAPVYHHGQSDTAGQT
RVQPEGSSHHSGSEGSGPSDPSQPEVTSVQRAAEDTEEERTRLHADDSDTDRQQEAKSQL
HHHHPHQAHPQSQPQTSTQRAVTDAPTTLRPASPSPRAQTTPRPPPLRRRRRKHRRRISK
ATMRAMIMVMS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaagaagagctcgtgcattctgctgctcgcggcgtttgcggcattcctgagg
cttggtagcgctgagggggacccgctccctccgtccctggtgggtttggtaagggacagc
cccatcgcatctatagaagacttaaggaagctgctggacactgactccgtagaagaagaa
tcagacaaccagacaaccaatgaaatccactccagcgatgttcatcatcgagttcccaga
agcctcatggcgagtgcggagccggcgctgcaggctgcgtgtaaggtgcgtacggaggtg
ctggaggtgacgcgctccatgcacgaccgcaccaacgcgcacttcatgctgtggcccctc
tgtgtggaggtgcagcgctgctctgggtgctgcaacggacgcaccttacagtgcgtgccc
atcgtcaccgagaccaggcagctgcagatgaccaagatcacgtatgtgaagatgcggccg
cactacgagaaggtcatcatccccgtggaggaccacgtgaggtgcggctgccagccgctg
acctctgcccacgccggacgctcctcgtccacgacggcgcgtaagccccaggccacccct
ccgccccccccggccccccgcgtggcccacaagccccccccgccaccgcacggccaggcc
aaggaggagctgcaccgccacgagcagctcaagcagcaccagcggcagcagctggaggag
cgggggggcgtccaggagccggcgtgggccagcaagtacagcccctcccacacggccggg
gagcccccgcaccacacgcccgcgcgcacggactaccagcagcaccgccgcaccaccccc
cagcacccgctcacacacagccagacgggggatcgggacggggaggcgggggccgggcag
atgccgtccagcgctcagccgtcgttcggcgacggcggtcatcgggaggacggggggagg
ccgccgacgctcgggcacggcagcggagacgatagcggccgacacgtgcagggcgggcag
cagcagtaccaggcaccggaccacacgcagaaccagcagcagcagcagcaggggccccag
cacgactacaggctcacgctgggggagcagcccaggcaccggccggcactgtccggcaca
cacatgctgcgggacgccaccacgccccaccagccgcaacacgcaccgccctaccaccac
cacggccaaccggacgcccccgtctaccaccacggccaatcagacacggccggtcagacg
cgcgtccagccggaagggagcagccatcacagcgggtcggaggggagcggtccgtccgat
cccagccagcccgaggtgaccagcgtccagagagcagcggaggacacggaggaggagagg
acgcggctacacgcagacgactcggacacggacaggcaacaggaagccaagtcacagctt
catcatcatcatccccaccaggcgcatccccagagccagccgcagacgtccacacagcga
gcagtgacggacgctccgactacgttacggccggcgagtccgtccccgagagctcagacc
accccgcgacccccgcccctacgcaggagacgacgcaaacaccgccggaggatcagcaag
gccaccatgagagccatgatcatggtcatgtcctaa
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