Sardina pilchardus (sardine): 134095141
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Entry
134095141 CDS
T10667
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134095141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134095141
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
134095141
REST complex
134095141
Heterochromatin formation proteins
Other heterochromatin formation proteins
134095141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
134095141
NCBI-ProteinID:
XP_062404499
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All DBs
Position
11:complement(1828672..1843964)
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AA seq
1288 aa
AA seq
DB search
MKRRLEEQDTTVFASQQRRLPGSTDGFQHRVLAPATALYEAVSDNMQPSSGMQYSVPHGY
QVPMAQSSGSHGHTSSPAVHSGPHHHTPAVHPQGPAVGPAPHHAPASSAPAQGQQQFQRL
KVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMG
FNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNILPPPHQAQPPVPTTTAATTV
TGQPTPAKISKPMQSPALTPTSQPNPSIPSYASPRSPSVQPHTPVSSTPASAPPLQNNQP
VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQ
VARLFKNQEDLLSEFGQFLPDANSSAFIKTIFPPQLLSKTTAEKAESVRNDHGGTVKRPQ
LNNKQRFSQNGCQIRRHAGPPSTPPVKKKPKYFGKDPQLAEASKLGGGTESMFFEKVRKA
LRSNEAYENFLRCLVLFNQEVIARAELVQLVVPFLGKFPELFTWFKNFLGYKESTHIESF
PKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSE
DSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLESVQKKLSRMSAEEQAKFRL
DNTMGGTSEVIHRKAIQRIYGDKAPDIIDGLKRNPAVSVPIVLKRLKIKEEEWREAQRGF
NKIWREQNEKYYLKSLDHQGINFKQNDTKVFRSKTLLNEIETLYDERQEQASEEGGPTPP
PTGPHMTLPYEDGQILEDAAGLIIHHVKRQAGIQKDDKHKIKQVIYHFLPDMLFARRVEL
SDAEEEEEEEEEEDGEAGEDGNAATKRPNGTAASGGGQRSKLLFGGSSAAAQRGSGSGSD
EAYNLLYANNNWYVFLRLHQILCARLLRIFNQAERQIGEDSHERAWEREVLGLRREKGDS
PAIQLRLKEPMDMEVDEYYQAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKL
IQSIVRQLQHIVSDEICVQVTELYLGECANRATGGPLASQSSRSAAEATYQRKAEQLMSD
ENCFKLNFQKSRGNIQLAVELLDTEEDNSDEPAEAERWSDYVDRYLNSDSTSPELREHLA
QKPVFLPRNLRRIRKCQRGQEMQEREAKEAAKKSAETADSMNMECMFKLNSYKMVYVFKS
EDYMYRRTALLRAHQSHERVSTRLHQRFQAWLDKWRKEHVTSEMATDNRKWLMGEGREGL
LLPCKTTCHPEVLHFVGINKYRVKYTSP
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgcttggaggaacaggacacaactgtttttgcgtctcaacagcgtcgactc
cctggtagtactgacggattccaacatcgtgtcctagccccagcaacagctctgtacgag
gcggtttcagacaacatgcaaccgtcctctggcatgcagtattccgtccctcacgggtat
caggttccaatggcccagagttcaggcagtcatggtcacaccagtagcccggcggtccac
agcgggcctcaccaccacacccctgcggtccatccccaggggcctgctgtgggcccagca
ccccaccacgctccagcctcttcagcgcctgcacagggccagcagcagttccagagactc
aaggtcgaggatgcgctgtcctatttggaccaggtgaagttacaatttggaaatcagcct
caagtctataatgactttcttgatataatgaaggagttcaagtctcaaagcattgacact
ccaggagtcatcagcagagtgtcacagcttttcaaaggccacccagatcttatcatgggt
ttcaacactttcttgccccctggctacaagatcgaggtgcagaccaatgacctggtcaat
gtgaccaccccgggtcaaattcaccacatcaccccccatgggatatcggtgcagaacatt
ctgcctccgcctcaccaggcccagccgcctgtgcccaccaccaccgctgccaccacagtc
actggtcagccaactccagccaaaatcagcaagcccatgcagtctccagccttgaccccg
accagtcagcccaacccgtccatcccttcctatgcgtcgccgcggtcgccctcagtccag
ccccacacgccagtgagcagcacgccagccagtgccccgcccctacagaacaaccagccg
gtggagttcaaccatgccatcaactacgtcaacaagatcaagaaccgcttccaaggccag
ccagacatctataaggccttccttgagatcctgcatacttatcagaaagagcagcgcaat
gctaaggaggctggggggaactacactcctgcactcacagagcaggaagtctatgcccaa
gtggcccgcctcttcaagaaccaggaggatctgctctcagagtttggccagttcttacct
gatgccaacagctcggcattcattaaaacgattttccccccgcagctgctgagcaagacg
actgcggagaaggcggagtcggtgaggaatgatcatggcggaacagtgaagaggccccag
ctgaacaacaagcaaaggttcagtcagaatggctgtcagatcagaaggcatgctgggccc
ccctcaactccccctgtcaagaagaaaccaaagtattttgggaaagatcctcagttggca
gaggcaagcaaacttggtggtggaacagagtctatgttctttgagaaggtgcggaaagcc
ttgcgcagcaatgaagcctatgaaaacttcctgcgttgcctggtcctctttaatcaggag
gttatcgctcgagcagagctggtccagctggtcgttcccttcttggggaaattcccagag
ctcttcacctggttcaaaaacttcctgggctacaaagaatccacacacatcgagagcttt
cccaaggagcgggccaccgagggcatcgccatggagatagattatgcttcctgcaagaga
ctgggctcaagttacagagcattgcccaagagctaccagcaacccaaatgcacaggcagg
accccactttgtaaagaggtgcttaatgacacttgggtgtcattcccctcctggtctgag
gattctacttttgtgagctccaagaagacccagtatgaagaacacatatacagatgtgag
gatgagcgttttgagttggatgtggtgctcgagaccaacctggccaccatccgtgtcctg
gagagtgtgcagaagaagttgtcccgcatgtctgcggaggagcaggccaagttcaggctg
gacaacaccatgggtggcacctccgaggtgattcaccgcaaggccatccagaggatatat
ggggacaaggctccggacatcatcgacggcctcaaaaggaacccagcagtctccgtcccc
attgtgctgaaaaggctaaagataaaagaagaggaatggcgggaagcccagagaggcttt
aataagatctggagggagcagaacgagaagtattacctgaagtctctcgaccaccagggc
atcaacttcaaacagaacgacacaaaggtgttccgctccaaaacgctgctcaatgagatc
gagactttgtacgatgagcggcaggagcaggcgtccgaggagggcggccccactcccccc
cccaccgggccgcacatgaccctgccctacgaggacggccagatcctggaggacgccgcc
ggcctcatcatccaccacgtgaagcggcaggccggcatccagaaggacgacaagcacaag
atcaagcaggtcatctaccacttcctgcccgacatgctcttcgcgcgccgcgtcgagctc
tcggacgcggaggaggaagaggaggaggaggaagaggaggacggcgaggcgggagaagac
ggcaacgccgccaccaagcggcccaacggcacggcggcgtccggcggcggtcagcgctcc
aagctgctgttcggcgggagcagcgcggccgcccagcggggctccggcagcggcagcgac
gaggcctacaacctgctctacgccaacaacaactggtacgtgttcctgcggctgcaccag
atcctgtgcgcgcgcctgctgcgcatcttcaaccaggcggagcggcagatcggcgaggac
tcgcacgagcgcgcctgggagcgcgaggtgctcggcctgcgccgagagaagggcgacagt
cccgccatccagctgcgcctcaaagagcccatggacatggaggtggacgagtactaccag
gccttcctggagatggtgcgcaacctgctggacggcaacatggaggcgtcccagtacgag
gactcgctgagggagatgttcaccatccacgcctacatcgctttcaccatggacaagctc
atccagagcatcgtcaggcagctccagcacatcgtgagcgatgagatctgcgtgcaggtg
acggagctgtacctgggcgagtgtgccaaccgcgccaccggcggcccgctggccagccag
agctcgcgcagcgccgccgaggccacctaccagcgcaaggccgagcagctcatgtccgac
gagaactgcttcaagttgaacttccagaagagcagagggaatattcagctggccgtggag
ctcctggacacggaggaggacaactcggacgaacccgccgaggcagagcgctggtcagac
tacgtggaccgttacctgaactcggactccacctcccctgagctccgggagcacctcgct
cagaagcctgtgttcctccccaggaacctgcggaggatccgtaagtgccagcgtggtcag
gagatgcaggagcgggaggccaaggaggctgcgaagaagtccgccgagacggccgacagc
atgaatatggagtgcatgttcaagctcaactcctacaagatggtgtatgtcttcaagtca
gaggattacatgtaccggcgcactgccttgctccgagcccaccagtctcatgagcgggtg
agcactcgcctgcaccagcggttccaggcgtggctggacaagtggcggaaggagcatgtg
acgtccgagatggctaccgacaaccgcaagtggctgatgggtgagggccgcgagggtctg
ctgttgccctgcaaaaccacctgccaccccgaggtgctgcacttcgtgggcatcaacaag
taccgcgtgaagtacacctcaccgtga
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