Sardina pilchardus (sardine): 134095186
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Entry
134095186 CDS
T10667
Symbol
slit3
Name
(RefSeq) slit homolog 3 protein
KO
K06850
slit 3
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spil00536
]
134095186 (slit3)
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Axon guidance molecules
134095186 (slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRR_9
LRRNT
hEGF
Laminin_G_1
EGF_TEN
LRR_14
LRRCT
EGF_3
LRR_EndoS
LRR_NXF1-5
EGF_Teneurin
EGF_2
EGF_CA
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
134095186
NCBI-ProteinID:
XP_062404579
LinkDB
All DBs
Position
11:complement(15131885..15393553)
Genome browser
AA seq
1525 aa
AA seq
DB search
MLASVRGRWTVLRCWGSLVLLCGLLCSVAVDGCPHKCSCSGSHVDCQGQSFRTVPRGIPR
NAERVDLDRNNITRITKVDFSGLKNLRVLHLENNQISVVERGAFQDLKQLERLRLNRNKL
QVLPELLFQSTPKLGRLDLSENQIQSVPRKAFRGITAVKNLQLDSNHISCIEDGAFRALR
DLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFTQ
CMAPAHMRGLNVPDVQKREFVCTGPMQTEPRTCVPQAAVCPASCTCNNNIVDCRRKGLTE
IPANLPEGIMEIRLEQNLIKSIPAGAFSPYKKLKRIDLSKNQISDIAEDAFTGLRSLTSL
VLYGNKIAEIPKGLFDGLVSLQLLLLNANKIQCLRVNTFKDLQSLNLLSLYDNKLQTISK
GLFTPLRSIKTLHLAQNPFMCDCHLKWLADYLFENPIETSGARCSHPRRLANKRISQVKG
KKFRCTGTEDYRSRLSGECFQDLVCPERCRCEGTVVDCSNLKLTKIPPHLPEHTTDLRLN
DNEISVLEASGAFKKLPNLKKINLSNNKLRDVREGAFDGASGVMELLLTGNKLQGINGRM
LKGLTGLKTLMLRSNQITCVDNGTFTGLSSVRLLSLYDNRISTIAPGAFSTLHSLSTINL
LSNPFVCDCHLAWLGQWLKKTRVVSGNPRCQKPAFLKEIPIQDVATPDFTCDGTEENGCL
PVPRCPESCTCSDTVVRCSNRGLHMLPKGIPKDTTELYLEGNLLTSVPKELASLKQLTLV
DLSNNSIGSLAPMTFSNMTQLATLILSYNQIRCIPLHSFDGLRSLRLLTLHGNDLSTIPE
GAFNHLTSLSHLALGANPLYCDCELRWLSQWVKAGFKEPGIARCTGPPDMADRLLLTTPL
NRFQCKGPGDLNLMSKCAPCLATPCHNNATCSSDASASYHCTCPFGYKGRNCEIPLNACL
SLPCSNGGTCHLAPGQEGHFSCVCPPGYEGPQCDVNPDDCEDNDCENNSTCVDGINNYTC
LCPFNYRGDLCEEVIDPCLSGFDPCQHDSKCIPLASGYRCECLPGYVGQQCELDYNDCLE
NKCQHGAECVDAINGYTCVCTTGFSGLFCENPPPMILLQTSPCDQSDCQNGAACIVTEGE
PVCRCLPGFFGTKCHKMSTAHFLGKEVYVELPSTKARSSVHISLQMATDRDNGILLYKED
HDPLVLELYQGHIRLIYDIAKYPPTTVYSVESVNDGIFHTVELLIQNQTLSLVVDQGPPK
SLGKLPRQPSVDHNTKLFVGGVPALIGASGLRPGPDRPSQSFNGCVHNVRINGELQDLGG
APRGAEGVLPGCHSCGVCAQGTCRQTGETGITCECPPGRTGPLCDQVASPSPCQNNRCVH
GLCVPRGSSYSCQCAEGFAGQYCQQRQEPPSCRGHQCGQGECRMGESGEPTCHCPAGYTG
TNCQTEMRCQGELVREQLKRQQGGRVCTSTSKVPRVECPPACHSGLCCTPTKSRRRKVTF
KCPDGTSFAEELDTPVECGCTKCQL
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgtctgtgcgggggaggtggaccgtactgaggtgctggggaagcctggtgctg
ctctgcggattgctgtgctctgtggcggtggatgggtgcccccataaatgcagttgttct
ggatctcatgtggattgccaaggtcaaagcttccggaccgtgccacggggaatccccaga
aacgccgagcgtgtggacctggacaggaacaacatcacccgcatcaccaaggtggacttc
tctggcctaaagaacctgcgtgttctgcacctggagaataatcagatcagtgtggtggag
agaggagcatttcaggacctcaaacagctggagagacttcgcctgaaccggaacaagctg
caggttctccccgagctgctgttccagtcgacacccaaactgggccgcctggacttgagt
gagaaccagatccagtctgttcctcgtaaggcattccgtggaatcacagctgttaaaaac
ctgcaactggacagcaaccacatcagctgcatcgaagatggagccttccgagcactgcgc
gatctggagatcctcaccctcaacaacaacaacatcaccctcatccccctgtccagtttc
aaccacatgcccaagctgcggacacttcgcctccactccaataacctgcactgtgactgc
cacctgtcctggctctctgattggctacgccagaggcggggcctcgcccccttcacccaa
tgcatggcccccgcccacatgaggggcctcaacgtgcctgatgttcagaagagagagttt
gtctgcacaggtccaatgcagacggagccccgtacgtgtgtgccccaggcagctgtgtgt
ccagcctcctgcacctgcaacaacaacatcgtggactgcaggaggaagggactgaccgag
atcccagccaacctgccagagggcatcatggagattcgtttggagcagaatctgattaag
agcattcctgcgggtgctttctccccctacaagaagctgaaaagaatagacctgagcaag
aaccagatttctgacatcgctgaggatgccttcactggactacgctccctcacctcgctg
gtgctgtatggaaacaaaatagctgaaatccccaaaggactgtttgatggtctggtgtcg
ctgcagctcttgctgctgaatgccaataagatccagtgtttgcgggtgaacacctttaag
gacctgcagagcctcaacctgctctccctctacgacaacaagctgcagaccatcagcaaa
ggactcttcacaccactgcgctccatcaaaacacttcacttggcccagaacccgttcatg
tgcgactgccacctgaagtggctggccgactacctgtttgagaaccccatcgagaccagc
ggggcccgctgcagtcacccccgccgcctggccaacaagcgcatcagccaggtcaagggc
aaaaagttccgctgcacaggcactgaggactaccgcagccgtcttagcggggagtgtttc
caggacctggtgtgtccagagaggtgtcgctgtgaggggacggtggtggactgctccaac
ctcaaactcaccaagataccgccacacctgccagagcacaccacagacctgcgattgaat
gataatgaaatctcagtgctggaggccagtggggcctttaagaagctgcccaacctgaag
aagattaaccttagcaacaataagctgcgggacgtccgtgagggggcgtttgatggagcc
agtggtgttatggaacttcttctgaccgggaacaaattgcagggaataaacggacgcatg
ctcaaaggcctgactggactcaaaacactgatgctgaggagcaaccagatcacatgtgtg
gacaacggcacattcactggcctgagctcagtgcggctgctctctctctatgataaccgc
atctcgaccatcgcccctggggccttcagcaccctgcactccctctccaccattaacctg
ctgtccaacccgtttgtgtgtgactgccacctggcgtggctgggtcagtggctgaagaag
actcgggtggtgagtgggaacccgcgctgccagaagccggccttcctcaaggagatcccc
atccaggacgtggccacgccggacttcacctgcgacggtactgaggagaacggctgtctt
cctgttcctcgttgcccagagtcctgcacatgctcagacacagtggtgcgctgcagtaac
cgcgggttacacatgctgcccaagggcatccccaaggacaccaccgaactgtatctggaa
gggaacctgctgacgtcagtgcccaaagagctggccagcctgaagcagctcaccctggtg
gacctgagcaacaacagcattggctctctggccccgatgaccttcagcaacatgactcag
ctagccaccctaatccttagctacaaccagatccgctgcatcccgctacattcctttgat
ggtctccgttcactgcgtctgttaactctccacggcaacgacctctccaccattccagaa
ggagctttcaaccatctaacgtccctctcacatctggcactgggggccaaccctctgtac
tgtgactgtgagctgcgctggctctcccagtgggtgaaggccggctttaaggagcccggc
atcgcccgctgcactggaccccccgacatggccgaccgcctgctgctcaccacgccactc
aaccgcttccagtgtaaaggccctggtgacctgaacctgatgtccaagtgcgccccctgc
ctggccacgccctgccacaacaacgccacctgcagcagcgacgccagcgcctcctaccac
tgcacctgccccttcggctacaagggtcgtaactgtgagatccctctgaacgcgtgtctc
agtctgccctgcagtaatggaggtacctgccacctcgcccccggacaagagggacacttt
agctgtgtgtgtccccctggttacgagggtcctcagtgtgacgtgaaccctgatgactgc
gaggacaacgactgcgagaacaactccacctgtgtggatggcatcaacaactacacctgc
ctgtgcccattcaattacagaggtgacctttgtgaggaggtgattgacccttgtctgtca
gggtttgacccctgccaacatgactccaagtgcattcccctcgcaagtggatacagatgt
gagtgtttgccaggatacgtgggacagcagtgtgagctggactataacgactgtctggag
aacaagtgtcagcatggagcggagtgtgtggacgccatcaacggatacacgtgtgtgtgc
acgactggcttcagcgggcttttctgtgaaaaccctcctcccatgatcctgctgcagacc
agcccatgtgaccaatcagactgccagaatggggcggcgtgtatcgtcaccgagggagag
cccgtgtgtcgctgtctgcctggtttctttggcaccaagtgccacaagatgtccactgct
cacttcctgggcaaagaggtgtatgtggaactgcccagcaccaaggccaggtcctccgtt
cacatatcactgcagatggccactgatagggacaatggtattctgctctataaggaggac
catgatcctctggtgctggagctctatcagggccacatccggctcatctacgacatcgcc
aagtaccctcccaccaccgtctacagtgttgagtcggtgaatgacggtatcttccacacg
gtggagctactgatccagaatcagacgctgagcctggtggtggaccagggcccccctaag
agcctgggcaagctcccacgccagccctccgtggaccacaacaccaagctcttcgtcgga
ggtgtccctgccctgattggcgcgtctggattgcgtccaggccccgacaggccgtcccag
tccttcaacggctgtgtgcacaacgtgcggataaacggggagctgcaggacctggggggc
gccccgaggggggcggagggggtgctgccgggctgccactcctgcggcgtgtgtgcccag
ggcacctgcaggcagacgggtgagacgggcatcacctgcgagtgcccgccgggccgcaca
ggaccgctctgtgaccaggtcgcctcgcccagcccctgccagaacaaccggtgtgtgcat
ggtctgtgtgtgccccgaggctcgtcgtatagctgccagtgtgccgagggcttcgctggc
cagtactgccagcagcgccaggagcctccctcctgtagggggcaccagtgcgggcagggc
gagtgcagaatgggcgagagcggagagcccacatgccactgcccagctggctacactggc
accaactgccaaacagagatgcgttgccagggcgagctggtgcgtgagcagctgaagcgt
cagcaggggggtcgcgtgtgcacctccaccagcaaggtgccgcgggtggagtgccccccc
gcctgccacagcggcctctgctgcacccccaccaagagccgccgcaggaaggtcaccttc
aagtgccccgacgggacctccttcgccgaggagctcgacacgccagtggagtgcggctgc
acaaagtgccagctgtaa
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