Sardina pilchardus (sardine): 134095227
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Entry
134095227 CDS
T10667
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134095227 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134095227 (copb1)
Membrane trafficking [BR:
spil04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
134095227 (copb1)
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
134095227 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
134095227
NCBI-ProteinID:
XP_062404641
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All DBs
Position
11:12412593..12425512
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AA seq
961 aa
AA seq
DB search
MTAAENVCYTLINVPNDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLITEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENEIKKEAGDVKPEEEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFFVAASLATTLTKVALRYVGIVPDKKRQNSFVAEAMLIMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSELSPLMNDIFNKECRKSLSHMLAVRLEEEKLSQKKESEK
RNVIVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNISELNEYLLHILSSTNMKCLTPEKVMPSGAGQALSGICGFMA
ANLYARSIFGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKSM
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgcagaaaatgtgtgttacacccttattaatgttcccaatgactcggaacct
ccctctgaagtcagcctcaagactgatcttgaaaagggagagatcaaggcaaagactgaa
gctttgaagaaagtcatcatcatgattctgaacggggagaagttgccgggtcttctcatg
accatcatccgcttcgtgctcccgctccaagaccacaccatcaagaagctgctgctggtc
ttctgggagatcgtgcccaagaccacgccggacggcaagcttctccaggagatgatcttg
gtctgtgatgcctacaggaaggacctccagcaccccaacgagttcatccgcggctccact
ctgcgtttcctgtgcaagctgaaggaggcggagctgctcgagcccctcatgcctgctatc
cgcgcctgcctggagcatcgccacagctacgtgcgccgcaacgccgtcctggccatctac
accatctacagaaactttgaacacctgatcccagatgctccagaactgatccatgacttc
ctggtgaatgagaaagatgccagctgcaagagaaacgctttcatgatgttgattcatgcg
gaccaggacagagcgttggattacctcagcacctgtattgaccaggtgcacacctttgga
gacattctgcagttggtcattgtggaactgatctacaaggtgtgccatgccaatccgtca
gagcgcgctcgctttatccgctgcatttacaacctgctgcagtcctccagccctgcagtg
aagtacgaggccgcgggcacactcgtcaccctctccagcgcccccactgccatcaaggct
gctgcccagtgctatattgacctgatcatcaaggagagtgataacaacgtcaagctgatc
gtcctggaccgcctgatcgagctcaaggagcaccccacacacgagcgcgtgctgcaggac
ctggtgatggacatcctaagggtgctgaccactcccgatctggaagtgcggaagaagacc
ctgcaactagcccttgacctcgtctcatcgagaaatgttgaagagttggtgattgtgctg
aagaaggaggtgatcaagaccaacaacgtgacggagcacgaggacacagacaagtaccgg
cagctgctggtgcgcaccctccactcctgcagcgtccgcttccccgacatggccgccaac
gtcattcctgtgctgatggagttcttaagtgacactaacgaagctgctgcagcggacgtg
ctggagttcgtgcgggaggccatccagaggtttgacaacctcaggccactcatcaccgag
aagatgctggaggtcttccatgccatcaagacagtcaagatctacaggggcgctctctgg
atcctgggagagtactgcagtactaaagaagacatccagagtgtgatgactgaagtgcgg
cgatctctgggagagatccccatcgtggagaacgagatcaagaaggaggctggggacgtg
aagccggaggaggaggtgagcgccgctcctgcccagaaactggtgaccgagatgggcacc
tacgtcacacagagcgccctcagctcctcgcgcccctccaagaaagaggaagaccggccg
cctctgagaggcttcctcatggatggagacttcttcgtcgctgcctcattggcaaccaca
ctcaccaaagttgccctgcgatatgtgggcatagtccctgataagaagaggcagaactcg
ttcgtggcagaagccatgctcatcatggccactattctgcacctgggcaagtcctcgctg
cccaagaagcccatcacggacgacgacgtggaccgcatctcgctctgcctgaaggtgctg
tccgagttatcgccgctcatgaacgacatcttcaacaaggagtgccgcaagtcgctctcc
cacatgctggccgtgcgtctggaggaggagaagctctcccagaagaaagagtcggagaag
cgcaacgtgatcgtgcaggcggacgaccccatctccttcatgcagctgacggccaagaac
gagatgacctccaaagaggaccagttccagctcagcctgctggccgccatgggcaacacc
cagcgcaaagaggccgccgaccctctggcctccaaactcaacaaagtcacccagctcacc
ggcttctccgacccagtgtacgcggaggcctacgtccatgtcaaccagtacgatattgtc
ctggacgtgctggtggtcaaccagaccagcgatacactacagaactgcacactggagctg
gccacgttgggagacctgaagcttgtggagaagccctcccctctcactctggctccccac
gactttgccaacatcaaagccaacgtcaaagtggcatccacagagaatggcatcattttt
ggaaacatagtgtacgacgtgtcgggagcggccagcgacaggaactgcgtggtgctcagt
gacatccacatcgacatcatggactacatccagccggcctcctgcaccgacgccgagttc
aggcagatgtgggccgagttcgagtgggagaacaaggtgacggtgaacaccaacatctcc
gaactgaatgagtacctcctccatatcctcagctccaccaacatgaagtgcctgacccca
gagaaggtgatgccttccggcgctggacaggcactgtctggcatctgtggttttatggct
gccaacctgtacgctcgctccatatttggcgaggacgcgctggcgaacgtgagcatcgag
aagcccatccacttgggccctgacgcaccggtcaacggacacattcgcatccgggccaag
agccaggggatggccttgagtctgggggacaagatcaatctgtcgcagaagaagtccatg
tcgtag
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integrated database retrieval system
