Sardina pilchardus (sardine): 134095321
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Entry
134095321 CDS
T10667
Symbol
pkd1l2b
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134095321 (pkd1l2b)
04091 Lectins [BR:
spil04091
]
134095321 (pkd1l2b)
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134095321 (pkd1l2b)
Lectins [BR:
spil04091
]
C-Type lectins
Others
134095321 (pkd1l2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
SUEL_Lectin
Ion_trans
GPS
REJ
PKD
PKD_4
DUF7680
Motif
Other DBs
NCBI-GeneID:
134095321
NCBI-ProteinID:
XP_062404754
LinkDB
All DBs
Position
11:complement(31288547..31312961)
Genome browser
AA seq
2391 aa
AA seq
DB search
QSICFLFLAISYNIHKVVVCEIRDGIAESGKAARTSSQVVAEMDRGVFAEVVLLVILHIA
VTCGQDPAEALGCPEHQEPFDGSCYEFVAQQRTFQNAQRWCERGGGRLAFIMNDETQQFL
QQHLQPQQDWWIGLAPASSNLTLDSAAAEGTLSWLDGSDVSYSNWASEPSIGARCGYILQ
GSGFQWEASDNCTQEMHFACEFETGKSMACANYNVTLQCGSGQVIEVDDSFFGRKTIHYC
QGFPSPSVTSSQEECSWVDVVHLVEGQCHGLQACQALADASSFGEPCPGLGSYLSVEYHC
KDGLHLLMGKLATVFDNVTIQVKWLLHPFQGNLTCTLSAGDGHIIDPYTPDEXASVVHQY
NSPGVFTVGVECTTSEWHVTAQKTITIQEPLGEYGVVRCYIMGQLMNSTNCKALANNPLT
IQVNLVAGSNVTYKVQNNGTLLALSSAAVGVFPHNISLGSEEVQSLGPGCHQLTLLASNN
VTATDLSTELEVCVLEPVQGLQASVSTQAGPCPEAYLHVAVSLDHGAPARLLLQISDSDN
NTVQETREVDSGSLQVFNISTTIQGMAQVKVKAWNTFSATDQDAGNTTVADLSSCYSNGE
KRFRQVAQSVSSWAVPAATLQGAQQLITVIVYAYLNCDRTLNGNHTLKCDHTLRCDHTLT
RDHSLICDHTLTRDHSLRCDHTLTRDHTLTSSRETSAGPPSVLSCWTNPTAGDVLSPFTF
TCNVTQSFCSTAPCTYCLNTASGNYLYCGNNPSERSLFLPLGNRSIDYTLTVVATLQNSA
GQTLNTTILIKVRDSVSESTVQDLQDLVSNQVAELQSQGQLTGAALAQMYQTVSSALNGG
VNDEDKIARKELREQMVTNMSVAIESAPMGSTEEVQAVASAVAELTKQEDELTTDTQIQA
SSVLSKLSESLNSLPLPESNVNEKMLEASTPLIEAASNIILVSAATDKQSEIAEHLLNAV
DKVQSALLVGKKTSHGPTVITTPQISLYVNRMSPKNLAIQPFTIQNSSSASFALPPLDLS
AVSSTPVDVRMMTFETNPFAWNTAQSINGTVGALSLTQQNGSAIPVANLTNEIEIFLPRQ
LGAEVNHTFLDLGNFSTIMINVTSPNVSLVLKLDPSEDISLHLLIGFQEYPNDTHYEAQT
YLPQDGDTQEERYTWVLSPRDMTIDEGVYYLLVRPVVGAGVNSTNATVSITSIAAQCVYW
DELKLNWSDYGCRVGPLTTPLTTQCLCNHLTFFGSSFFVMPNVVDVSQIAQLFGTFVNNP
VVVCFIGAIFLAYLMVVIWARRKDIQDTAKVKITVLDDNDPLAEYRYLLNISTGHRRGAS
TSSQVTVTLLGTEGESEPHHLTDPDKPVFERGGADMFILTTPFSLGELQSIRLWHDNSGN
QPGWYINKVMVQDIETGQKWHFLCSSWLAIDVGECVLDKVFPVATDMDLKRFSNLFYMKT
VKDFRDGHIWFSVVSRPPNSNFTCVQRVSCCFSLLLCTMLTSIMFYGVPTDPAEQTMDLG
HIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNTRPRERKSKRPVKDKSKADTCKQAKSGR
VSPTQPPSPESQHRDITPEAVTKDIKRIAQSLSKVMKNPLPRIDVTSGKNPDINMLLSLV
EDIIRQQNRAGDMFYTDNSKFTVTLEENSSSESPKKTTSDAQKGSLYSQYLYRQLQHVEK
ELGLLGPTRFSNPDSYSQAVRQVRGMKGLLEPHLSSTSSGDHRSPSPEDSTEGGGSSGGK
GCCQGGLPWWFVFLGWLLVAATSGVSAFFTMLYGLKYGKERSVNWLISMVVSFFESLFIT
QPLKVLGFAVFFALVLKKVDQEEYGDVPIEESASNTGDPDGVRIARRDSTCSFYQPPPPS
DIEKMRMNMIKEQKVFALIREILIYMGFMWMLLLVAYGQRDPNAFYLTQHIQQSFSSGIT
DSMSHKEVFTWANTSLLNNIFGQYPGFITDGNSKLIGNARLRQVRVQKNSCRIARSMERS
VTDCHAPYSWEIEDRGCFGPGWNRSRDTNTSQAAAPSPWQYLSQSRLRAHPMWGSMALYR
GGGFVVELGPDLTNATSALQYLFDNRWLDVYTRAIFVEFTVYNANVNLFCIVTLMLESTA
VGAFQYRSEIQTVRLYQSTGGLHIFVMASEVIYFLFILYYMYVQGKLMRQQKWTYFKTKW
NLLELAIIILSWSALSVFIKRTLLGNRDLEFYQSNKDQYVSFHETATADAVLGYLIAFLV
LLSTIKLWHLLRLNPKLHLITSTLQRAWTDISGFLLVMTIMFLAYSIACNLMYGWKLSSY
RTLINAAQTVVSLQLGIFNYEEVLDYNPVLGAFLIGSCIIFMTFVVLNLFISVILVAFSE
EQLHHKPSEEEEIVDLMLMKICSLFGIKIKKKGEASDSSSATNNPAPSVIS
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
cagagcatatgctttctcttccttgccatatcgtataatattcacaaggttgttgtctgt
gaaatcagggatggcattgctgaaagtggcaaggctgcccgcaccagttcacaggtagtg
gccgagatggacagaggtgtctttgcagaggtggttctgctagtgattttacacatagcc
gtaacgtgtggtcaagaccccgcggaggccctgggctgtccagagcaccaggagcctttt
gacggctcctgctatgagtttgtggcacagcagcgcaccttccagaatgcccagcgctgg
tgtgaacgaggcggaggccgtctggcatttatcatgaacgacgagacccagcagttcctc
cagcagcacctccagccccagcaagactggtggatagggctggccccggcgtccagcaac
ctcaccctggactcagccgcagcagagggaacactctcctggctcgatggctccgatgtt
agttactctaactgggcgagtgagccttcaataggggccaggtgtggttacatcctccag
ggctctggctttcaatgggaggcctcagacaactgcacccaagagatgcactttgcctgt
gaatttgagactggaaaatctatggcttgtgcaaactacaatgtgacactgcagtgcggc
tctgggcaggtgatagaggtggacgacagcttctttggaaggaagacgatacactactgc
caggggttcccctctccctccgtcacatcctcacaagaagagtgcagctgggtggatgta
gtgcatttagtagaagggcagtgtcatgggctgcaggcctgccaagctctggcagatgca
tcatcctttggagaaccatgccccggtctcggaagctacttgtccgtggaatatcattgt
aaagatggtcttcacctgctcatgggcaagttggctactgtgtttgacaacgtcacaatc
caggtgaagtggcttttgcacccattccagggtaacctgacatgcacactcagtgcaggg
gatggccacatcattgacccctacactcctgacgagtgagccagtgtggtgcatcagtac
aacagtccaggggtcttcactgtcggggtggagtgcaccaccagtgagtggcatgtcact
gcgcagaagaccatcaccatccaggagccacttggggaatatggagtggtcaggtgctac
atcatgggccagctaatgaacagcacaaactgcaaagccctcgctaacaaccctcttaca
atccaggtcaacctggtagcaggaagcaatgtcacctacaaagttcagaacaacggcaca
ttattggccttgtcgtccgctgctgtgggcgtattccctcacaacatcagcctgggctca
gaggaggtgcagagcctgggtccaggctgtcatcagctgactctgctggcctctaacaat
gtcacagccactgacctctccactgagctggaggtgtgtgtgctggagccggtgcagggg
ctgcaggcgtcggtgtccacacaggccgggccgtgtcctgaggcgtacctccacgtcgcc
gtctctctggaccacggagcccccgcgcggctgctcctccagatatccgacagtgacaat
aacaccgtccaggagacgagagaagtggacagtggcagtcttcaggttttcaacatctca
acaaccatccaaggcatggcacaagtgaaggtcaaagcatggaacacattctcagccaca
gatcaggatgcaggaaatacaacagtggctgacctcagctcctgctacagcaacggggaa
aagcgattccgacaggtagcacagtcagtcagctcatgggccgtcccagcggccaccctg
cagggtgcacagcagctcatcacagtcattgtttatgcctacctcaactgcgaccgcacc
ctcaacggtaaccacaccctcaagtgtgaccacaccctcagatgtgaccacaccctcact
cgtgaccactccctcatatgtgaccacaccctcactcgtgaccactccctcagatgtgac
cacaccctcacacgtgaccacaccctcacatcctctcgtgagacaagtgcaggtccaccc
agtgtcctctcgtgctggacaaaccctactgctggagatgttctttctccatttaccttc
acttgcaatgtaacccagtccttctgtagcactgcaccctgcacctactgcctcaacact
gccagtggcaattacctttattgtggtaataaccccagtgagaggtcactcttcctgcca
ctaggaaacagaagtattgactacaccctaactgtggttgcaactttgcagaactcagct
ggacaaaccttaaacaccaccattctcatcaaggtgagggactctgtttctgagtccact
gtgcaggatctccaggacctggtgtcaaatcaggtggcagagttacagagccaaggccag
ctcacaggggcagccttagctcagatgtaccaaactgtgtccagtgctttgaatggaggc
gtcaatgacgaggacaagattgcaagaaaagagctccgagagcagatggtcaccaatatg
tctgtagcaatagagagcgcccccatggggagcacagaggaggtgcaggcagtcgccagt
gctgtggccgaactaaccaagcaggaagatgagctgaccacagacacacagatccaggca
agcagcgttttgtcaaagctcagcgagtccctcaactcacttccactccctgaaagcaat
gtaaatgagaagatgttggaagcatccacgcctctcattgaagctgctagtaacatcatt
ttggtctcagcagcgacagacaaacagagtgagatcgctgagcacttgctcaatgctgta
gacaaggtccagagtgcccttctggtagggaaaaagacatcccatgggcccacagtcata
acaactcctcagatcagtttatatgtcaacagaatgtctccaaagaaccttgcgatacag
ccattcacaattcagaactccagctctgccagcttcgctctcccaccgttagatctctct
gctgtgtcatcaacgcctgtggatgtccggatgatgacctttgagacaaatccatttgcc
tggaatacagcgcagtccatcaatggcacagtgggggctctgtctctcacccaacagaat
ggctccgccatccctgttgctaacctgacaaatgagattgagatttttttgccaaggcaa
ttgggtgctgaagtgaaccacacttttctggacctgggaaacttcagcaccatcatgatc
aatgtgacgtcacctaatgtgtccctggtgctcaagctggacccctcagaggacatctcc
ttacatttgcttatagggttccaggagtaccccaacgacacacactacgaggcacaaacc
tacctcccgcaggacggagacacacaagaggagagatacacatgggtgttgagccccagg
gatatgaccatagatgaaggtgtatactacctactagtgaggcctgtggttggggcagga
gtcaactctacaaacgccacagtctccattacgtccattgctgctcagtgcgtgtactgg
gatgaactaaagctaaactggagtgactatggatgcagggtgggtcccctgactacaccc
ctgaccacgcagtgcttgtgcaaccacctgacgttcttcgggagctccttcttcgtcatg
cccaacgtggtggacgtgagccagatagctcagctttttggcacttttgtgaacaatccg
gtggtggtgtgctttattggtgccattttcttggcctacctcatggtggtgatatgggca
cgacggaaggacattcaggacacagcaaaggttaagattactgtgctggatgacaacgac
cccctggcagagtacagatacttgctcaacatcagcactgggcaccgacgtggagcctct
acttcctcacaggtgacagtgactctgcttggcactgagggcgagagtgaaccacaccat
ctgactgacccagacaagccagtgtttgagagaggcggggcagacatgtttatactgacc
acgccgttctcattgggcgagctgcagagtatcaggctctggcatgacaactcagggaat
caacctggctggtacattaacaaagtgatggtgcaggacattgagacgggtcagaagtgg
cacttcctctgcagctcgtggctcgccatagatgtgggggagtgtgtcctggataaagtg
ttccctgtagccacagacatggacttaaagagatttagcaatctgttctacatgaagacg
gtgaaagatttccgtgatggccacatctggttctctgtggtcagccgcccgccgaacagc
aacttcacgtgtgtgcagcgcgtctcctgctgtttctccctgctgctgtgcaccatgctg
accagcatcatgttctatggcgtgcccacagatcctgctgagcagaccatggacttgggt
cacattgagttcacctggcagcaagtgatgattggcatccagagctccatcatcatgttt
cccatcaacctcctcatcgtcagcatcttcagaaacacacgcccgcgggagaggaagtcc
aagaggcctgtaaaggacaagagcaaggcggacacctgcaaacaggccaagagtggccgt
gtgtcaccaacccagccaccctcccctgagagtcagcacagggacataacaccagaagcc
gtaaccaaggacattaaaagaatagcacagtcactctccaaagtgatgaagaaccctctt
cccagaatagatgtgacatctggcaaaaaccctgacatcaacatgcttctttcactcgtg
gaggacatcatccggcagcaaaaccgtgcaggggacatgttttacacagacaactccaag
ttcacggtcactttggaagagaactcttcctctgagagcccaaagaaaacaaccagtgac
gcccagaagggcagcctgtacagccagtacctctaccggcagctccagcatgtggagaaa
gagctgggcctgctggggcccacacgcttctccaaccccgacagctacagccaggccgtg
cggcaggtccggggcatgaaaggcctcctagagccccacctgtcctccacctccagcgga
gaccaccgcagccccagccccgaggacagcactgagggagggggcagtagcggtggcaag
ggctgctgtcagggaggcctgccctggtggttcgtgttcctgggctggcttctagtggcg
gcaacgagcggcgtgtcggcgttcttcaccatgctgtacgggctgaagtacggcaaagag
cgctccgtcaactggctcatctccatggtggtgtcgttctttgaaagcctttttatcact
cagcctttgaaagtgcttgggtttgcggttttctttgccctagtgctgaagaaagttgac
caggaggaatatggtgatgttcctattgaggaatcagcgtcgaatacaggtgatcctgat
ggcgtacgtattgcacggagagacagcacatgcagtttctaccagccaccaccaccctca
gacattgagaagatgagaatgaacatgatcaaggaacaaaaagtgtttgccctcatcaga
gagattctcatatacatggggtttatgtggatgttactcttggttgcctacggtcaaagg
gatccaaatgcattctatctgacccagcacattcagcaaagcttcagcagtgggatcaca
gactcaatgagccacaaggaggtgtttacgtgggccaatacgtcgcttctgaacaatatt
tttggacaatatccaggcttcataacggatgggaattccaaacttattggcaatgcccgc
cttcgccaggtgagggtgcagaaaaactcctgtcgcattgcccgctccatggagcgctcg
gtcacagactgccatgctccgtactcttgggagatagaggacagaggctgctttgggcca
ggctggaatcgctccagggatacaaacacctcccaggctgctgcccccagcccctggcaa
tacctgagccagtcccgactcagagcacatcccatgtggggcagcatggccctgtacaga
ggaggaggctttgtggtggagctgggccctgacctgaccaatgctacaagtgcgcttcag
tacttgtttgacaacagatggctggatgtttacactcgtgctatctttgtggagttcacc
gtgtacaatgccaacgtcaacctcttctgcattgttacactaatgctagaatcaacagct
gtgggtgcattccagtatcgtagtgagatacagactgtccgtctctatcagtctacgggt
ggtttacacattttcgtcatggcctctgaggtcatctactttcttttcattctctactac
atgtatgtccagggcaagctaatgaggcagcagaagtggacttactttaagaccaagtgg
aaccttcttgagctggccatcatcatcctcagctggagtgcgctgagtgtgtttatcaaa
agaacattgctgggcaacagggacctggaattctatcaaagcaacaaggaccagtacgtc
agtttccatgagactgccacagcagacgccgtgctgggctacttgatcgcgttcctggtt
ctcttgtccaccatcaagctgtggcacctcctgcggctcaaccctaaactgcacctcatc
acctccaccctgcagagggcctggacagacatctcaggcttcctgctggtcatgaccatc
atgtttctggcctactctattgcttgcaacctaatgtatggctggaagctatcgtcatac
cggactctcattaatgcagcacagactgtggtcagcctacagcttggtatcttcaattat
gaagaggtgttggattataacccagttcttggtgcattcctaatcggctcttgcatcatc
ttcatgacctttgtggtgttgaacctctttatttctgtgatcctggtggcatttagtgaa
gaacaacttcaccataagccatctgaagaggaggagatagtcgacctgatgctgatgaaa
atctgtagtctgtttgggatcaaaattaagaagaaaggagaagcgagtgactcctcctct
gccactaacaatccagcaccctctgtcatatcgtaa
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integrated database retrieval system
