Sardina pilchardus (sardine): 134095423
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Entry
134095423 CDS
T10667
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03015
mRNA surveillance pathway
spil03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134095423
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134095423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134095423
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
134095423
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
134095423
NCBI-ProteinID:
XP_062404930
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Position
11:complement(13835158..13839553)
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AA seq
467 aa
AA seq
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MAASAAPDGLAPELIDIYDDFNQNNGEEGDFMGSVDPNDLYDDVVTGSVDQRRMSGGDVR
THKDLEKHDNPKPLITYSYSGGQTKRLSVYVGNFSWWTSDTDLLNLASTMGVKDILEIKF
AENRANGQSRGYAELVVSTEASLQKLLETMPQCHINGERVDCRFATRQNLAVFETLANKR
IPQRSNSKSESEAAADNRPNFPSSSEPCPPSHAPLVMPPHPHVNKLPSIAMPFYGRPPPL
YPPPHPPPLLLPPPIPPPLYPPPPPHIPTHQPPPALHLNPAFFPPPQESYSNNPPPYTRQ
SREREDSTPPLPDSEYDELMNRNKTIASSAISKAVAGAAAGDVSLAVETLLTAIAVIKQS
RVYSDERCRALVTSLKDCLFSIESKSYGSRKKHRSRERERSRDREHRDRDRERERDRDRD
REGSYSQNWEAGGMSRRYRDRSLSAERDRERMRAPRDRHREHRDRHR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgcagcgccggatggtctagcgccagaacttatagatatctacgacgac
ttcaatcaaaacaatggggaggaaggggacttcatgggttcagtggatccaaatgatctt
tacgatgatgtagtaactggttctgtggatcagagaaggatgtcaggaggggacgtcagg
acacacaaagacctggagaaacatgataatcccaaaccactaataacatatagctacagt
gggggacagaccaagaggctttcagtctatgttggaaacttctcctggtggacctcagac
acagatctgttaaacttggcaagcacgatgggagtcaaggacattttggaaatcaagttt
gcagagaatcgagctaatggccagtccagaggctacgctgagcttgtggtgtccactgag
gcttctttgcaaaaattgttggagaccatgccacagtgtcacatcaacggagagagggtg
gactgccgttttgccacacggcagaaccttgcagtgtttgaaacactggcaaacaaacgt
attccgcagcgttccaactccaagtcagagtcagaggcagcggccgacaaccgccccaac
ttcccttcctcttctgagccatgcccccccagccatgcaccgcttgtgatgccaccacat
ccccatgtcaacaagctcccatctatcgctatgccattttacggccgaccaccccctcta
tacccccctccccatcccccgccactcctcttaccaccaccaatacctcctccactttac
ccacccccacccccacacatccccacacaccagcccccacccgctctgcatctcaaccca
gccttcttcccccctcctcaggagagctacagcaacaacccaccaccctacacccgacaa
agtagggagagggaggactccacacctccactgcctgacagcgaatatgatgagctgatg
aacagaaacaaaaccatcgccagtagcgccatcagcaaggctgtggcaggagccgctgca
ggagatgtgtccctggctgtagagaccctcctcactgctattgccgtcattaaacagtct
cgagtgtatagtgatgaacgctgtcgggctttagtgacttcgctgaaagactgcctcttc
tccattgagagcaagtcttacggctcaaggaagaaacatcgatcacgtgagagggaacgc
tcacgcgacagggaacaccgggaccgggacagggagcgagagcgtgatcgggaccgagac
cgggagggctcctacagtcaaaactgggaagcaggaggaatgtcccgccgttacagagac
cgttctcttagcgccgagagagaccgggagcggatgcgggcgccgcgagaccggcatcga
gaacaccgggatcgacaccgctag
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