Sardina pilchardus (sardine): 134095471
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Entry
134095471 CDS
T10667
Name
(RefSeq) C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134095471
Membrane trafficking [BR:
spil04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134095471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
134095471
NCBI-ProteinID:
XP_062405015
LinkDB
All DBs
Position
11:complement(26627274..26672470)
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AA seq
1956 aa
AA seq
DB search
MLEDKGPRVADYFVVAGLTDPFKPLDEELRFDDVCHKTARPKAPITDVTVVMRSLGEEVP
PGYACVETTPSGLSADLNNGGLMAPEVYLCYKRGRDKPPLTDLGVLYEWKERLKQGCHLV
QTTPGGRPANLSGSSQRVYITYRRAPESQSHASLAVTDICVIIPGKGESPPHTFCKVEKN
LNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATLE
CWPPHTKYSLPVFSTFVLTGSSGDKVYGAAIQFYEPFSEDCLTNRQRLQLGLSLPDPKAG
SRSPNADPQAGLRSPNADPKAGSRSPKADPKAASRTVHTNKSICLLSHWPFFDAFRKFLT
FLYRYSISGPHALPIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSG
GRFSTLLQSLGPENAVSLLVYAMTEQKILVHSLRPAVLTSVTEALVSMIFPFHWQCPYVP
LCPLALAGILSAPCPFIIGLDTRYFDLYEPPPDVNCVDLDTNTVSQMEDKRALTWKLLPK
KACKNLMNALSNLYQQLVEGHQRPQHDGLAELSVCVGGEGELGGGRSLHALELDIQEAFL
RFMAALLRGYRAFLRPITQAPSEKTTDASSLFDLQGFLRSRDRSHQKFYSAMVKTQLFSR
FIEECSFVSDKDASLAFFDDCVDKVDGERSEEGKLIEFDESQRSEHTVFITPPELPPLPE
GEEHPLCYSYAGFPVLTDDLFDRVDGLRTPASLLASRQSCPTSPAPMFRRTKQEIKLAQK
VAKKYSSVPQMWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMHTKKIQPP
DEVCYRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGY
FLWLKLRNVVLGVAQFRQALKKHQQPSAHTPPSDGSDLDALSQGSMDSSNETNPADLIKV
EATDDRSSTGDQSDLGYNSLSKEEVRRGETIPEKEKRESDCSSLSETESAKGSGDCLPQL
DFPAPNQPRPGIVRGNSCFDGPALKKQESSSAVAGLLFSSSLEDIGVMQGGSLHRRLGNL
REKTDGLVEEPGMRGRRHSGDSATPTGAVLGLSLNQGETDPRKIARNLGDDAKILSGSLR
KSRRCETLGMNSKQAHALLRDDEPAVHRLSLTTAEDAEEDPDSSDEEGTDDDKVDNDLAA
IFDLEDLDLDSERPAGSRRQSVPVLLGIPAKRMGIETGFDPLSLLAAETESEAAEVSSEG
AGGDRTPPGMRRDLAEEIEMYMNHMGSPLSSRAPSSVDLRFPASPAGGAAHHHQQHEARR
GSLPHCSSRALSVPRSHTYHSHQQVAHSHSAQSVRSRTPQANTPTHARARLWSTPGYPPD
GGASQRGEERDRDPHSDLASPPPSPSPYSSSFGLDTLLTPSLDVFKSSMVSAGKGVAEKA
SRWYSRLATYTTPTKDMSSDQLSVEDDDECDGEGEEVFLSSDGPFSPRRPGPRRSPRRSP
MRSPAAQASANRRSSIHTGYLLSPPPSVPDRSDLGSSRYTSNTSIFQNYAMEILISSCSR
CKTCDCLVYDEEIMAGWTADDSNLNTICPFCGNPFLPFLNVEIRDLRGPGRLFLKSSPSA
DEAISSSYSVSTGLDTGTSTLSPPSPVPIHARSSSFIRAPCIDIPERQQGSLSPGAPMAR
SVSAFGPLEEPPRPLHRGPTGSLPSRLNEATDPLSMEWRLHHPEPVTVPYLSPLVLWKEL
ESLLENEGDQAITLSGLVDHHPIIFWNLVWYFRRLDLPSNLPGLILTSDHCNRGSQVPRD
WMSEDSKHVLVQILWDNLKLHQDPIQPFYILWNTQSLSYPVCRLGNEKEQVFGEEVLQGV
VRSIQRNDIHSPMCHILQLLAHTLGVRRQRSLYRDILFLSLVALGKDSIDIDAFDREYKL
AYDRLSPAQVKLTHNSDRPPSTGVMECRKTFGEPYL
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagacaaagggccccgtgtcgcggactactttgtggtggccggcctgacggac
cccttcaagccgctggacgaggagctgcgcttcgatgacgtctgccacaagacggcgcgg
cccaaggcgcccatcaccgacgtcaccgtggtgatgcgctcgctgggcgaggaggtgccg
ccgggctacgcctgcgtggagaccacgccctccggcctgtcagctgacctgaacaacggc
ggcctgatggcacctgaggtctacctgtgctacaagcgcggccgggacaagcccccactc
accgacctcggtgtcttgtatgaatggaaggagcgcctgaagcagggctgccacctggtc
cagaccactcccggcggtcgcccggccaacctcagcggctcgtcccagcgcgtttacatc
acctaccgcagagcgcctgagagccaatcacatgcctcgctcgctgtgacggacatctgt
gtcatcataccaggaaagggcgaatctccaccgcacaccttctgcaaagtggagaagaat
cttaacagcagcatgtgggggtcatctgtctacctgtgctacaagaaatcagtggccaaa
accaacaccatcgcctacaaagcagggttgttcagtaggtacccagaggaggactatgag
tctttccctctcccggagtccgtgcccctcttctgcctgcccatgggagctacgctggag
tgctggcctcctcacaccaaatactccctccccgttttctccaccttcgtgctcaccggc
tcttcaggagacaaggtgtatggggctgccatccagttctatgagcccttctccgaggac
tgcctgacgaacaggcagcgtctgcagctgggcctgtccctccctgaccccaaggcaggg
tcacgctcccccaacgctgacccccaggcagggttacggtcccccaacgctgaccccaag
gcagggtcacgctcccccaaggctgaccccaaggccgcctcgcgcaccgttcacaccaac
aagagcatctgtctgctctcgcactggccctttttcgacgccttccggaagtttctcact
ttcctctaccgctactctatctccgggccacatgcccttcccattgagaagcacatatct
cactttatgcacaaagttcccttcccctcatctcaaagacctcgcattcttgtacagctt
tccccacatgacagtctgatgttgagccagcctgtgtcctctcctttgccactcagcggg
ggccggttctctacgctgcttcagagtctgggccccgagaatgccgtctcgctgctggtg
tacgccatgacggagcagaagatcctggtgcactcactacgacctgcggtgctcaccagc
gttaccgaggctctggtgtctatgatcttccctttccactggcagtgcccatacgtgccg
ctgtgcccgctggcattagcagggattctgagcgccccctgccccttcatcattgggctg
gacacacgctactttgacctctatgagccgcctccagatgtcaactgtgtggacctggac
actaacactgtatctcaaatggaggataagcgtgctctaacatggaagctcctcccaaag
aaagcctgcaaaaacctgatgaatgcactcagtaacctctaccagcagctagtagaagga
caccagaggccgcagcacgacggcttggcggagttgtcggtgtgtgtcgggggtgaaggg
gagctgggcggcgggcgtagcctgcatgctctggagctggacatccaggaggcgttcctg
cgcttcatggcagcgctgctgcgcggctaccgcgccttcctccggcccatcacgcaggcg
ccctccgagaagaccaccgacgccagctcgctcttcgacctgcagggcttcttgcgcagc
agggatcgctctcatcagaagttctactctgcgatggtgaagacacagctcttcagccgc
ttcattgaggagtgctccttcgtcagcgacaaagatgccagcctggccttcttcgacgac
tgtgtggacaaagttgatggggaacgcagcgaagagggcaaactgatcgagtttgatgag
tctcagagaagtgaacacactgtcttcattacaccacctgagctaccacccctgccagag
ggagaggagcatccactctgctacagctatgctggcttccctgtgctgacggatgacttg
tttgatcgtgttgatggcctgaggactcctgcctctctgcttgccagtcgtcagagctgc
cctacaagtcctgctcccatgttcagacgcactaaacaggagatcaagctggctcagaag
gtggctaaaaagtactcgtctgtgccccagatgtggtctaagtgccttctgcgccactgc
tatggcctgtggttcatctgcctgcccgcctatgtcaaggtctgccactccaaggtgcgg
gctctccgcaccgcctacgacgtcctgaggaagatgcacaccaagaagatacagccacct
gatgaggtgtgttacagagtcctgatgcagctctgtggccagtatggccagcctgttctg
gccgtgagagttctgtttgagatgaagaaagctggtgtccatcccaatgccatcacctat
ggctactacaacaaggctgttttagagagcacttggccgtccagcaccagaggtggctac
ttcctgtggctgaaattgaggaatgtggttctgggtgttgcccagttcagacaggctcta
aagaagcatcagcagccgtctgcacacacacctccctcagacggcagtgatttggacgct
ctgagtcagggcagcatggacagctccaacgagactaaccctgctgaccttatcaaagta
gaggccactgacgatagatctagcacaggtgaccagtcagatctgggctacaactcactg
tctaaagaagaggtgcggagaggagagaccatccccgagaaggagaagagggagagtgac
tgcagctccttgtctgagacagagagtgccaaaggcagtggagactgtcttccacagctg
gacttcccagctcctaatcagccgcgtccagggatcgtccgtggcaactcctgctttgat
gggcctgcccttaaaaaacaagaaagctcctcagccgttgctggtctactcttctcctcc
tctttagaggacatcggggtcatgcagggaggcagtctgcatcgtcgcctgggtaaccta
cgcgagaagaccgacgggttggtggaggagcctgggatgagaggtcgtcgccatagcggc
gactcggccacccccaccggcgccgtgctgggcctgagcctgaaccagggcgagacggac
ccgcgcaagatcgcccgcaacctcggagacgacgccaagatcctctcggggagcctgcgc
aagagccggcgatgcgagacgctgggaatgaacagcaagcaggcgcacgcgctcctgcgc
gacgacgaaccggcggtgcacaggctctccctcacgaccgcagaggacgccgaagaggac
ccggactccagcgacgaggaggggaccgacgacgacaaggtggacaacgacctggcggcc
atcttcgacctggaggacttggacctggactcggagaggccggcggggtcgcggcgccag
tcggtcccggtcctgctgggcatcccggccaagcgcatgggcatcgagacgggcttcgac
ccgctgtcgctgctggcggccgagacggagtcggaggcggcggaggtgtccagcgagggg
gccggcggggaccggacgcccccggggatgcggcgcgacctggccgaggagatcgagatg
tacatgaaccacatgggcagcccgctgagcagccgcgcgcccagcagcgtggacctgcgc
ttccccgccagcccagcggggggcgccgctcaccaccaccagcagcacgaggcgcggcgc
ggcagcctgccccactgctcgtcccgcgcgctctccgtgccccgctcgcacacctaccac
tcgcaccagcaggtggcgcactcgcacagcgcgcagagcgttcgctcgcgcacgccccag
gccaacacgccgacccacgccagggcccggctgtggtccacgcccgggtatccgcccgac
gggggggcctctcagcggggcgaggagagggaccgggacccccactcggacctggcctcc
ccgcccccctctccctcgccctactcctcctccttcgggctggacactctgctcacgccc
tcgctggacgtcttcaagagcagcatggtgtcggcggggaagggtgtggccgagaaggcc
agccgctggtactcacgcctggccacttacaccactcccaccaaggacatgagctcagac
cagttgagtgtggaggatgatgacgagtgtgatggggagggagaggaagtctttctgtct
tctgacgggcccttctccccacggcgaccgggccctagacgcagcccccgccggagcccc
atgcgcagccccgccgctcaggccagcgccaaccgccgcagcagtatacacacaggttat
cttctctctcctcctcccagtgtccctgaccgctctgacctgggctcatctcgatacacc
agcaacactagcatcttccagaactatgcaatggagattctgatctccagctgctcgcgc
tgcaagacctgtgactgtctggtgtacgacgaggagatcatggcgggctggacggcggac
gactccaacctcaacaccatctgcccgttctgtggcaaccccttcctccccttcctcaac
gtggagatcagggacctgcggggccccggcaggttgtttctgaagagtagtccatcagca
gatgaagctatctcctcttcctactctgtttccactgggctggacactgggacctccacc
ctctcacccccgtccccagttccaatacacgcaaggagcagctccttcatcagggctccg
tgtatagatatcccggagaggcagcagggctctctgtcccccggggcccccatggcgcgg
agcgtcagtgccttcgggcccctggaggagccgccgcggcctctgcaccggggccccact
ggcagcctgcccagccggctcaacgaggccacagatccgttgagtatggagtggcgcctg
caccaccctgagccagtgacggtgccctacctgagtcctctggtcctgtggaaggagcta
gagagcctgctggagaacgagggagaccaggccatcactctgtcagggctggtggatcac
catcccataatattctggaaccttgtgtggtactttcgccgactagatctgcccagcaac
ctgccaggccttattctgacatcagaccactgtaacagaggatctcaggttcctcgtgac
tggatgtctgaggacagtaagcacgtgctggtgcagatcctgtgggacaacctgaaactc
caccaggaccccatacagcccttctacatcctgtggaacacacagagtctgagttaccca
gtgtgccggctggggaatgagaaggagcaggtgtttggtgaggaggtgctgcagggcgtg
gtgaggagcatccagcgcaacgacatccacagccccatgtgccacatcctccagctgctc
gcacacaccctcggggtccgcagacagaggagtctgtacagggatatcctcttcttatct
ctggtcgctctgggcaaagacagcattgacattgatgcgtttgaccgggagtataagctg
gcgtatgaccgtctatctccagctcaggtcaagctcactcataactccgaccggcccccc
agcacaggggtcatggagtgcagaaaaacctttggagagccttatctctga
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