Sardina pilchardus (sardine): 134095500
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Entry
134095500 CDS
T10667
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1 isoform X1
KO
K11883
RNA-binding protein NOB1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134095500 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spil03009
]
134095500 (nob1)
03051 Proteasome [BR:
spil03051
]
134095500 (nob1)
Ribosome biogenesis [BR:
spil03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
134095500 (nob1)
Proteasome [BR:
spil03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
134095500 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
DZR_2
HypA
Zn_ribbon_15
Zn_ribbon_8
DZR
DUF7129
PBP_sp32
DUF6746
Motif
Other DBs
NCBI-GeneID:
134095500
NCBI-ProteinID:
XP_062405069
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All DBs
Position
11:20539101..20544167
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AA seq
519 aa
AA seq
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MDAAKVEHVVADAGAFLKKAPLQEIGKTIYTLKDVVNEIRDKPTKRSLSFLPYTLIFKDP
FPEHVRFVTEFSKKTGDYPSLSATDIKVLALTYQLELENVGSKHLKSEPDVKVKVSSTQR
HPEAPDNIAGFHFPHHKTSEPHDGRQANRETQAHCTAESNNVISLDPNNVEFTSFQFWRT
TLPDIEADILELLNVTEVKTQVQSPAKINDVISSPTETVEFNSFQFWRAPIPSIDADLFE
LLGVDAMTAGDSEVSEKMESVHLSSEEHNTSTDSGKGKDSEVSTGSQEGSEEERGEEEEE
EDEDDDDGGDGGGWITPKNIKQVTLDGHNGKPAADVKVGCVTTDFAMQNVLIQIGLNVLS
VNGMLIKQTRNYILRCHACFKTTTNMNKTFCPHCGNNTLKKVAVTISEDGSTQMHFSKNP
KVLNPKGMRYSLPKPQGGKHANNPHLVEDQQFPQQRVSRKARQKTDVFDPDYVAGNSPFM
DNDIYSRSANLHIRDTQGIGGGRRRSNPNAARKKFVKKK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccaaggtggagcatgttgtcgctgatgctggagcatttttgaaaaaggcc
ccacttcaggaaatcgggaaaaccatctacactttgaaggatgtcgtgaatgaaattcgg
gacaaaccaaccaaaagaagtttatccttcctaccctacacactcatcttcaaagaccct
tttccagagcacgtacgattcgtgacagaattctccaaaaagacgggagactaccctagc
ctctctgccacagacatcaaagttttggccttgacataccagcttgaactggagaatgtt
ggttccaagcacctaaaatcggaacctgatgtaaaggttaaagtttccagtacacagcga
catccagaggctccagataacattgctggattccactttcctcatcataaaacctcagag
ccacatgacgggagacaagccaacagagagacacaagcacactgtactgcagagtcaaat
aatgttatttctctggatcctaacaatgttgagttcaccagcttccagttctggcgaact
actttacctgatattgaagctgacatcttggagttacttaatgttacagaagtgaagaca
caagtgcagagtccagccaagataaatgatgtgatctcttcgcccactgagacggtagag
tttaacagctttcagttctggagagctcctatacccagcattgatgctgatctattcgaa
ctacttggtgtagacgccatgactgctggagacagtgaggtgtctgagaagatggagtct
gtgcatctgtcttcagaggagcacaacacgtccacagactctgggaagggcaaagactca
gaagtcagcactggctctcaagaaggaagcgaggaggagaggggggaagaggaggaggag
gaggatgaagatgatgatgatggtggtgatggtggtggctggatcacgccaaagaacata
aaacaggtcacgttggatggtcacaatggcaaaccagcagcagatgttaaagtgggctgt
gtaaccactgacttcgctatgcagaatgtcctcattcagattgggctgaatgtcctgtcg
gtgaatggcatgctcatcaagcagacgaggaactacattttgcgctgccatgcgtgtttc
aagaccacaaccaacatgaacaagacattctgcccacactgtggcaacaacacactaaag
aaggttgcggttaccatcagtgaggatggtagtacacagatgcatttctccaagaacccc
aaggttttgaatccaaaaggaatgaggtactccttgccgaagccacagggtggcaaacac
gctaacaatccccacctggtagaagaccagcagtttccccagcagagggtatccaggaag
gcgcgccagaagaccgatgttttcgacccagactacgtggctggaaactctccgttcatg
gacaacgatatttacagccgctctgccaacctgcatatccgggacacccagggcatcggt
ggtgggcgccgtcgcagcaaccccaatgctgctcgtaagaagtttgtcaaaaagaagtga
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